More than 300 homologs were found in PanDaTox collection
for query gene Krad_3901 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  100 
 
 
407 aa  800    Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  48.87 
 
 
394 aa  283  4.0000000000000003e-75  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  53.7 
 
 
320 aa  268  1e-70  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  46.62 
 
 
409 aa  260  4e-68  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  47.92 
 
 
404 aa  256  4e-67  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  50.37 
 
 
336 aa  253  4.0000000000000004e-66  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  48.42 
 
 
311 aa  253  5.000000000000001e-66  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  48.42 
 
 
311 aa  252  8.000000000000001e-66  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  48.42 
 
 
311 aa  252  8.000000000000001e-66  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  53.38 
 
 
404 aa  251  2e-65  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  51.1 
 
 
326 aa  250  3e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  50.93 
 
 
424 aa  245  9.999999999999999e-64  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  49.06 
 
 
466 aa  244  1.9999999999999999e-63  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  48.77 
 
 
307 aa  241  2e-62  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  43.33 
 
 
306 aa  236  4e-61  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  47.12 
 
 
463 aa  233  4.0000000000000004e-60  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  45.39 
 
 
434 aa  232  7.000000000000001e-60  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  44.19 
 
 
434 aa  228  1e-58  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  41.2 
 
 
393 aa  227  3e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  43.73 
 
 
296 aa  219  5e-56  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  46.3 
 
 
363 aa  212  1e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  44.6 
 
 
303 aa  210  4e-53  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  45.02 
 
 
313 aa  207  2e-52  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  43.43 
 
 
307 aa  205  1e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  38.56 
 
 
489 aa  199  6e-50  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  35.33 
 
 
497 aa  187  3e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  36.69 
 
 
432 aa  180  4e-44  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  37.26 
 
 
509 aa  178  1e-43  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  33.43 
 
 
732 aa  176  8e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  38.7 
 
 
504 aa  172  1e-41  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  33.84 
 
 
505 aa  171  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  32.98 
 
 
549 aa  167  2.9999999999999998e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  36.07 
 
 
491 aa  166  9e-40  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  38.1 
 
 
390 aa  162  1e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  36.05 
 
 
486 aa  157  4e-37  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  33.84 
 
 
522 aa  153  7e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  37.5 
 
 
521 aa  152  7e-36  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  36.19 
 
 
414 aa  150  3e-35  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  33.64 
 
 
567 aa  149  1.0000000000000001e-34  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  34.22 
 
 
625 aa  149  1.0000000000000001e-34  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  33.13 
 
 
420 aa  146  8.000000000000001e-34  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  36.05 
 
 
512 aa  145  1e-33  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  33.88 
 
 
468 aa  142  9.999999999999999e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  32.57 
 
 
478 aa  137  4e-31  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  33.33 
 
 
497 aa  137  5e-31  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  31.38 
 
 
453 aa  136  7.000000000000001e-31  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  33.21 
 
 
573 aa  136  8e-31  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  33.02 
 
 
545 aa  135  9.999999999999999e-31  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  36.67 
 
 
506 aa  135  9.999999999999999e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  31.96 
 
 
530 aa  134  1.9999999999999998e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  38.22 
 
 
481 aa  134  3e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  31.78 
 
 
618 aa  133  5e-30  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  32.97 
 
 
480 aa  131  2.0000000000000002e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  32.12 
 
 
516 aa  131  2.0000000000000002e-29  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5265  cell envelope-related transcriptional attenuator  35.49 
 
 
414 aa  131  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.534178 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  32.89 
 
 
493 aa  131  3e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  30.29 
 
 
493 aa  130  5.0000000000000004e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  36.32 
 
 
468 aa  129  8.000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  32.46 
 
 
410 aa  129  8.000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  33.45 
 
 
490 aa  129  1.0000000000000001e-28  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  33.45 
 
 
490 aa  129  1.0000000000000001e-28  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  33.45 
 
 
490 aa  129  1.0000000000000001e-28  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  39.71 
 
 
374 aa  128  2.0000000000000002e-28  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  35.74 
 
 
379 aa  127  3e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  28.96 
 
 
400 aa  127  3e-28  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  35.32 
 
 
382 aa  127  5e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4511  transcription attenuator LytR  38.19 
 
 
358 aa  126  5e-28  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  29.04 
 
 
481 aa  126  6e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  34.47 
 
 
405 aa  126  8.000000000000001e-28  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  34.34 
 
 
676 aa  125  9e-28  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  32.33 
 
 
560 aa  124  2e-27  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  30.42 
 
 
419 aa  124  3e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  29.97 
 
 
496 aa  123  5e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  35.38 
 
 
362 aa  123  7e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  43.56 
 
 
453 aa  122  9.999999999999999e-27  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  40.53 
 
 
377 aa  122  1.9999999999999998e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  31.89 
 
 
349 aa  121  1.9999999999999998e-26  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  34.32 
 
 
395 aa  121  1.9999999999999998e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  40 
 
 
375 aa  120  3e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  30.07 
 
 
465 aa  120  3e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  40 
 
 
375 aa  120  3e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  40 
 
 
375 aa  120  3.9999999999999996e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  40 
 
 
375 aa  120  3.9999999999999996e-26  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  40 
 
 
375 aa  120  3.9999999999999996e-26  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  39.47 
 
 
377 aa  120  4.9999999999999996e-26  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  41.06 
 
 
304 aa  120  6e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  28.01 
 
 
417 aa  119  7e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  33.33 
 
 
643 aa  119  7.999999999999999e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  33.61 
 
 
319 aa  119  7.999999999999999e-26  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  32.45 
 
 
584 aa  119  9.999999999999999e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  29.73 
 
 
517 aa  119  9.999999999999999e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  40 
 
 
377 aa  119  9.999999999999999e-26  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  40.4 
 
 
304 aa  117  3e-25  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  28.44 
 
 
538 aa  117  3e-25  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  31.37 
 
 
381 aa  117  3.9999999999999997e-25  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  32.5 
 
 
414 aa  117  5e-25  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  38.95 
 
 
383 aa  115  1.0000000000000001e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  36.68 
 
 
563 aa  115  2.0000000000000002e-24  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  33.99 
 
 
406 aa  115  2.0000000000000002e-24  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_009953  Sare_5021  cell envelope-related transcriptional attenuator  33.48 
 
 
312 aa  115  2.0000000000000002e-24  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00237783 
 
 
-
 
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