More than 300 homologs were found in PanDaTox collection
for query gene Gura_1146 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  100 
 
 
188 aa  375  1e-103  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  78.07 
 
 
202 aa  301  4.0000000000000003e-81  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_002939  GSU2822  response regulator  75 
 
 
191 aa  299  2e-80  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  65.76 
 
 
205 aa  256  1e-67  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  51.37 
 
 
194 aa  193  1e-48  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  51.91 
 
 
194 aa  192  2e-48  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  52.2 
 
 
191 aa  191  4e-48  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  49.45 
 
 
195 aa  187  7e-47  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  48.94 
 
 
197 aa  180  1e-44  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_007498  Pcar_2091  response regulator  45.7 
 
 
187 aa  175  4e-43  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2955  response regulator  49.18 
 
 
199 aa  172  3.9999999999999995e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  44.57 
 
 
226 aa  169  2e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  45.45 
 
 
199 aa  169  2e-41  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  44.92 
 
 
199 aa  167  9e-41  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  45.36 
 
 
220 aa  165  2.9999999999999998e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  46.45 
 
 
214 aa  165  2.9999999999999998e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  43.72 
 
 
220 aa  165  2.9999999999999998e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  45.41 
 
 
207 aa  164  6.9999999999999995e-40  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  46.45 
 
 
204 aa  164  6.9999999999999995e-40  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  42.62 
 
 
229 aa  164  9e-40  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  43.72 
 
 
227 aa  163  2.0000000000000002e-39  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  42.08 
 
 
215 aa  162  3e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  44.32 
 
 
210 aa  162  4.0000000000000004e-39  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  44.32 
 
 
210 aa  162  4.0000000000000004e-39  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  46.45 
 
 
197 aa  161  4.0000000000000004e-39  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  44.32 
 
 
210 aa  162  4.0000000000000004e-39  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  43.78 
 
 
213 aa  160  9e-39  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  45.36 
 
 
229 aa  160  1e-38  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  44.81 
 
 
200 aa  159  2e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  44.86 
 
 
205 aa  159  2e-38  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  43.65 
 
 
189 aa  159  2e-38  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  43.17 
 
 
206 aa  159  3e-38  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  44.81 
 
 
194 aa  158  5e-38  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  42.62 
 
 
212 aa  158  6e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  44.32 
 
 
200 aa  158  6e-38  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  43.89 
 
 
247 aa  157  1e-37  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  43.72 
 
 
206 aa  155  3e-37  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  43.17 
 
 
201 aa  152  2e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  43.17 
 
 
201 aa  153  2e-36  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  44.69 
 
 
207 aa  151  5e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  40.98 
 
 
210 aa  151  5.9999999999999996e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  40.98 
 
 
229 aa  151  7e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  41.53 
 
 
206 aa  150  8e-36  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  39.46 
 
 
220 aa  150  1e-35  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  45.36 
 
 
207 aa  147  7e-35  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  40.88 
 
 
205 aa  146  1.0000000000000001e-34  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  40 
 
 
198 aa  145  5e-34  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  41.18 
 
 
194 aa  144  8.000000000000001e-34  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  39.13 
 
 
196 aa  140  9.999999999999999e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  38.59 
 
 
196 aa  140  9.999999999999999e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  40 
 
 
194 aa  140  9.999999999999999e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  39.13 
 
 
194 aa  137  1e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3279  response regulator receiver and ANTAR domain protein  44.92 
 
 
191 aa  135  4e-31  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  38.46 
 
 
198 aa  134  9.999999999999999e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_012918  GM21_0970  response regulator receiver and ANTAR domain protein  44.39 
 
 
191 aa  133  1.9999999999999998e-30  Geobacter sp. M21  Bacteria  n/a    normal  0.772223 
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  39.23 
 
 
195 aa  131  6e-30  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_008261  CPF_0888  response regulator  35.68 
 
 
191 aa  131  6e-30  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  38.71 
 
 
242 aa  127  1.0000000000000001e-28  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  35.14 
 
 
198 aa  124  6e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  34.63 
 
 
249 aa  124  7e-28  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0739  putative response regulator  36.76 
 
 
261 aa  124  7e-28  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  34.55 
 
 
203 aa  122  2e-27  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  34.59 
 
 
192 aa  123  2e-27  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  34.22 
 
 
192 aa  116  1.9999999999999998e-25  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  32.6 
 
 
221 aa  116  1.9999999999999998e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  34.81 
 
 
194 aa  114  6e-25  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  33.7 
 
 
208 aa  114  6.9999999999999995e-25  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_013385  Adeg_1890  response regulator receiver and ANTAR domain protein  34.55 
 
 
197 aa  108  5e-23  Ammonifex degensii KC4  Bacteria  normal  0.0366782  n/a   
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  31.32 
 
 
190 aa  100  9e-21  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2864  Fis family transcriptional regulator  31.55 
 
 
191 aa  99.8  2e-20  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000561884  n/a   
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  31.52 
 
 
218 aa  96.7  2e-19  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_007955  Mbur_1557  response regulator receiver  39.67 
 
 
131 aa  94.4  9e-19  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000000412225  n/a   
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  33.74 
 
 
198 aa  94  1e-18  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_007484  Noc_1494  response regulator  33.15 
 
 
194 aa  93.6  2e-18  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.621557  n/a   
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  25 
 
 
196 aa  92.8  3e-18  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A3448  putative transcriptional regulator  36.97 
 
 
143 aa  92  4e-18  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.132297  normal  0.0606491 
 
 
-
 
NC_009485  BBta_4139  response regulator receiver/ANTAR domain-containing protein  25.97 
 
 
196 aa  92  5e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.214536 
 
 
-
 
NC_011832  Mpal_1773  response regulator receiver sensor signal transduction histidine kinase  35.77 
 
 
386 aa  91.3  8e-18  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011988  Avi_5900  two component response regulator  26.88 
 
 
195 aa  90.5  1e-17  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_3039  response regulator receiver sensor signal transduction histidine kinase  40.17 
 
 
355 aa  90.5  1e-17  Methanospirillum hungatei JF-1  Archaea  normal  0.610599  normal 
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  25.82 
 
 
196 aa  90.1  2e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  33.7 
 
 
243 aa  89.7  2e-17  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  25.27 
 
 
195 aa  90.1  2e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  27.57 
 
 
191 aa  88.6  5e-17  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  24.73 
 
 
207 aa  88.2  6e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_009253  Dred_1293  response regulator receiver protein  35.82 
 
 
159 aa  88.2  6e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3008  multi-sensor hybrid histidine kinase  35.77 
 
 
953 aa  88.2  7e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2709  two component signal transduction response regulator  36.15 
 
 
429 aa  87.8  8e-17  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  36.59 
 
 
352 aa  87.8  8e-17  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  28.65 
 
 
191 aa  87  1e-16  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_009720  Xaut_2506  response regulator receiver/ANTAR domain-containing protein  27.07 
 
 
221 aa  87.4  1e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187461  normal 
 
 
-
 
NC_011769  DvMF_1460  putative PAS/PAC sensor protein  35.77 
 
 
474 aa  85.5  5e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.81808 
 
 
-
 
NC_009972  Haur_0985  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  34.85 
 
 
704 aa  85.1  6e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000494124  n/a   
 
 
-
 
NC_009253  Dred_2811  response regulator receiver/ANTAR domain-containing protein  30.05 
 
 
191 aa  84  0.000000000000001  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00444481  n/a   
 
 
-
 
NC_007298  Daro_0829  response regulator receiver:ANTAR  29.25 
 
 
191 aa  83.2  0.000000000000002  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.018256 
 
 
-
 
NC_008228  Patl_2529  response regulator receiver/ANTAR domain-containing protein  31.16 
 
 
212 aa  83.2  0.000000000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0655  two component LuxR family transcriptional regulator  43 
 
 
194 aa  82.8  0.000000000000003  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2637  putative PAS/PAC sensor protein  34.62 
 
 
461 aa  82.8  0.000000000000003  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  36.51 
 
 
636 aa  82.4  0.000000000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_010320  Teth514_2061  response regulator receiver modulated diguanylate cyclase  35.81 
 
 
318 aa  82.4  0.000000000000004  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0000000365539  n/a   
 
 
-
 
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