More than 300 homologs were found in PanDaTox collection
for query gene Amir_4191 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_4191  methyl-accepting chemotaxis sensory transducer  100 
 
 
538 aa  1014    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
542 aa  259  7e-68  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1293  chemotaxis sensory transducer  37.34 
 
 
542 aa  254  4.0000000000000004e-66  Nocardioides sp. JS614  Bacteria  normal  0.320257  n/a   
 
 
-
 
NC_013521  Sked_30950  methyl-accepting chemotaxis protein  40.49 
 
 
540 aa  253  7e-66  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.664181  normal 
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  46.3 
 
 
702 aa  244  3e-63  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_013757  Gobs_5008  methyl-accepting chemotaxis sensory transducer  42.47 
 
 
546 aa  240  5e-62  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  45.6 
 
 
545 aa  239  1e-61  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  46.92 
 
 
518 aa  234  2.0000000000000002e-60  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  47.3 
 
 
535 aa  229  8e-59  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  51.72 
 
 
533 aa  225  2e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  48.17 
 
 
538 aa  224  4e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  37.87 
 
 
536 aa  222  9.999999999999999e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
NC_013521  Sked_03110  methyl-accepting chemotaxis protein  44.55 
 
 
347 aa  220  5e-56  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0123169  normal 
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  47.95 
 
 
538 aa  220  5e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  48.87 
 
 
904 aa  220  5e-56  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  36.11 
 
 
522 aa  219  1e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  50.4 
 
 
1150 aa  218  2e-55  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  45 
 
 
545 aa  217  2.9999999999999998e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1913  methyl-accepting chemotaxis sensory transducer  44.35 
 
 
524 aa  218  2.9999999999999998e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0934644  normal 
 
 
-
 
NC_009664  Krad_4271  methyl-accepting chemotaxis sensory transducer  37.48 
 
 
535 aa  214  4.9999999999999996e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.79817  normal  0.653673 
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  47.83 
 
 
540 aa  212  1e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  47.81 
 
 
537 aa  212  1e-53  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1755  methyl-accepting chemotaxis sensory transducer  36.27 
 
 
538 aa  211  3e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_36620  methyl-accepting chemotaxis protein  48.14 
 
 
543 aa  211  3e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0835028  normal  0.811978 
 
 
-
 
NC_013093  Amir_0375  methyl-accepting chemotaxis sensory transducer  48.26 
 
 
544 aa  210  5e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_30970  methyl-accepting chemotaxis protein  43.52 
 
 
562 aa  207  3e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4077  methyl-accepting chemotaxis sensory transducer  46.51 
 
 
545 aa  206  8e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30940  methyl-accepting chemotaxis protein  42.09 
 
 
407 aa  205  1e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682285  normal 
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  48.16 
 
 
538 aa  206  1e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  44.31 
 
 
528 aa  204  3e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  45.16 
 
 
858 aa  204  3e-51  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_009664  Krad_1002  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
529 aa  201  3e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  hitchhiker  0.00624598 
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  45.29 
 
 
547 aa  201  3.9999999999999996e-50  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
394 aa  199  9e-50  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2460  methyl-accepting chemotaxis sensory transducer  44.9 
 
 
531 aa  199  1.0000000000000001e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0651  methyl-accepting chemotaxis sensory transducer  46.6 
 
 
535 aa  197  4.0000000000000005e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.406234  normal  0.0260089 
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  49.5 
 
 
538 aa  197  4.0000000000000005e-49  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0421  methyl-accepting chemotaxis sensory transducer  39.49 
 
 
623 aa  196  1e-48  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.308823 
 
 
-
 
NC_009664  Krad_1914  methyl-accepting chemotaxis sensory transducer  36.9 
 
 
550 aa  194  3e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.37871  normal 
 
 
-
 
NC_009664  Krad_1613  methyl-accepting chemotaxis sensory transducer  50 
 
 
523 aa  194  3e-48  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00385179  normal 
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  38.19 
 
 
531 aa  193  6e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  37.33 
 
 
686 aa  189  1e-46  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0199  methyl-accepting chemotaxis sensory transducer  40.88 
 
 
532 aa  189  2e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.570256  n/a   
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  44.13 
 
 
540 aa  188  2e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_013174  Jden_1961  methyl-accepting chemotaxis sensory transducer  40.38 
 
 
535 aa  187  3e-46  Jonesia denitrificans DSM 20603  Bacteria  normal  0.286616  normal 
 
 
-
 
NC_009664  Krad_3504  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
657 aa  187  5e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.193477  normal 
 
 
-
 
NC_013093  Amir_3089  methyl-accepting chemotaxis sensory transducer  35.13 
 
 
526 aa  187  5e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1606  methyl-accepting chemotaxis sensory transducer  44.54 
 
 
545 aa  187  5e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0156977  normal 
 
 
-
 
NC_013521  Sked_30960  methyl-accepting chemotaxis protein  45.09 
 
 
540 aa  185  1.0000000000000001e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1935  methyl-accepting chemotaxis sensory transducer  43.08 
 
 
530 aa  184  4.0000000000000006e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.376441  normal 
 
 
-
 
NC_009664  Krad_0049  methyl-accepting chemotaxis sensory transducer  47.3 
 
 
539 aa  184  4.0000000000000006e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0550535  normal  0.228084 
 
 
-
 
NC_013173  Dbac_1148  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.11 
 
 
650 aa  182  1e-44  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.605213  n/a   
 
 
-
 
NC_013174  Jden_0360  methyl-accepting chemotaxis sensory transducer  42.18 
 
 
544 aa  179  1e-43  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2646  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
625 aa  179  1e-43  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1511  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.51 
 
 
574 aa  179  1e-43  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0260271  n/a   
 
 
-
 
NC_013521  Sked_30920  methyl-accepting chemotaxis protein  43.12 
 
 
583 aa  178  2e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_32360  methyl-accepting chemotaxis protein  43.04 
 
 
530 aa  179  2e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1510  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.12 
 
 
574 aa  175  1.9999999999999998e-42  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00534894  n/a   
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  46.64 
 
 
562 aa  174  2.9999999999999996e-42  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_013521  Sked_07600  methyl-accepting chemotaxis protein  52.51 
 
 
533 aa  174  2.9999999999999996e-42  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0696595 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  39.63 
 
 
565 aa  174  3.9999999999999995e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0250  methyl-accepting chemotaxis sensory transducer  33.96 
 
 
554 aa  174  5e-42  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.000234986  n/a   
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
715 aa  173  5.999999999999999e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_013173  Dbac_2858  methyl-accepting chemotaxis sensory transducer  34.42 
 
 
687 aa  173  5.999999999999999e-42  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  38.34 
 
 
670 aa  173  6.999999999999999e-42  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  43.45 
 
 
965 aa  172  1e-41  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  38.28 
 
 
563 aa  171  2e-41  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1783  chemotaxis sensory transducer  45.03 
 
 
515 aa  171  3e-41  Nocardioides sp. JS614  Bacteria  normal  0.552405  n/a   
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  38.61 
 
 
561 aa  171  4e-41  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  36.02 
 
 
697 aa  171  5e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
567 aa  170  5e-41  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_013173  Dbac_1209  methyl-accepting chemotaxis sensory transducer  34.53 
 
 
560 aa  170  6e-41  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0163835  n/a   
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  34.22 
 
 
563 aa  169  8e-41  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  39 
 
 
689 aa  169  9e-41  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  38.44 
 
 
561 aa  169  9e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  38.83 
 
 
563 aa  169  1e-40  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  42.39 
 
 
675 aa  169  1e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  33.56 
 
 
562 aa  169  1e-40  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.68 
 
 
564 aa  169  1e-40  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1710  methyl-accepting chemotaxis sensory transducer  43.87 
 
 
449 aa  168  2e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.140977  normal  0.0321459 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  32.94 
 
 
655 aa  169  2e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_013124  Afer_0753  methyl-accepting chemotaxis sensory transducer  43.96 
 
 
558 aa  168  2e-40  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.75846  n/a   
 
 
-
 
NC_010511  M446_0619  methyl-accepting chemotaxis sensory transducer  44.66 
 
 
561 aa  168  2.9999999999999998e-40  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0130228 
 
 
-
 
NC_007643  Rru_A3465  methyl-accepting chemotaxis sensory transducer  46.38 
 
 
419 aa  168  2.9999999999999998e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.61828  n/a   
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  38.68 
 
 
563 aa  168  2.9999999999999998e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_007643  Rru_A1197  chemotaxis sensory transducer  44.27 
 
 
688 aa  167  4e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  42.81 
 
 
566 aa  167  5.9999999999999996e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  43.08 
 
 
667 aa  167  5.9999999999999996e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
573 aa  166  6.9999999999999995e-40  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  36.94 
 
 
569 aa  166  1.0000000000000001e-39  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  43.13 
 
 
561 aa  166  1.0000000000000001e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_007643  Rru_A1802  chemotaxis sensory transducer  42.54 
 
 
438 aa  165  2.0000000000000002e-39  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  34.53 
 
 
688 aa  165  2.0000000000000002e-39  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_013173  Dbac_1064  methyl-accepting chemotaxis sensory transducer  30.72 
 
 
573 aa  165  2.0000000000000002e-39  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.223413  n/a   
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  36 
 
 
563 aa  165  2.0000000000000002e-39  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_009485  BBta_4739  methyl-accepting chemotaxis sensory transducer  45.34 
 
 
450 aa  165  2.0000000000000002e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  39.4 
 
 
688 aa  165  2.0000000000000002e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  34.58 
 
 
689 aa  164  3e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  37.97 
 
 
568 aa  164  4.0000000000000004e-39  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_007643  Rru_A2460  chemotaxis sensory transducer  37.7 
 
 
565 aa  164  5.0000000000000005e-39  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
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