More than 300 homologs were found in PanDaTox collection
for query gene Syncc9902_1600 on replicon NC_007513
Organism: Synechococcus sp. CC9902



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007513  Syncc9902_1600  LuxR family transcriptional regulator  100 
 
 		 227 aa  466  9.999999999999999e-131  Synechococcus sp. CC9902  Bacteria  normal  0.240626  n/a   
 
 
-
 
NC_008820  P9303_12791  hypothetical protein  45.41 
 
 		 233 aa  192  4e-48  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.0492582 
 
 
-
 
NC_007516  Syncc9605_1536  response regulator receiver domain-containing protein  40.77 
 
 		 142 aa  104  1e-21  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008820  P9303_05591  DNA-binding response regulator  35.11 
 
 		 241 aa  103  1e-21  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.843109 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  35.06 
 
 		 211 aa  100  1e-20  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_007516  Syncc9605_2104  two component LuxR family transcriptional regulator  30.8 
 
 		 233 aa  97.4  1e-19  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  34.09 
 
 		 214 aa  97.8  1e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal  1 
 
 
-
 
NC_003909  BCE_2293  LuxR family DNA-binding response regulator  32.39 
 
 		 211 aa  91.7  8e-18  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  31.94 
 
 		 225 aa  91.3  1e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  33.92 
 
 		 209 aa  90.1  2e-17  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  35.09 
 
 		 204 aa  89.7  3e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  32.95 
 
 		 214 aa  88.6  7e-17  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  31.28 
 
 		 229 aa  88.6  8e-17  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  30.43 
 
 		 213 aa  86.3  3e-16  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_011988  Avi_5384  two component response regulator  29.55 
 
 		 216 aa  85.9  4e-16  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  30.11 
 
 		 213 aa  85.9  5e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  32.95 
 
 		 227 aa  85.9  5e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_009921  Franean1_0533  two component LuxR family transcriptional regulator  30.9 
 
 		 219 aa  85.5  6e-16  Frankia sp. EAN1pec  Bacteria  normal  0.405575  normal  1 
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  31.52 
 
 		 213 aa  85.5  7e-16  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.000000185138 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  30.86 
 
 		 209 aa  85.1  9e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  31.52 
 
 		 213 aa  84.3  0.000000000000001  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  29.67 
 
 		 209 aa  84  0.000000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_2048  response regulator  29.67 
 
 		 209 aa  84  0.000000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  29.67 
 
 		 209 aa  84  0.000000000000002  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  29.65 
 
 		 244 aa  84  0.000000000000002  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  30 
 
 		 209 aa  84  0.000000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  29.67 
 
 		 209 aa  84  0.000000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  31.1 
 
 		 213 aa  84  0.000000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_2290  DNA-binding response regulator, LuxR family  29.67 
 
 		 209 aa  84  0.000000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000736213 
 
 
-
 
NC_010571  Oter_2496  two component LuxR family transcriptional regulator  34.5 
 
 		 212 aa  83.2  0.000000000000003  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.996792 
 
 
-
 
NC_013510  Tcur_1651  two component transcriptional regulator, LuxR family  31.22 
 
 		 218 aa  83.6  0.000000000000003  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000163278  n/a   
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  32.77 
 
 		 220 aa  83.2  0.000000000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  29.67 
 
 		 207 aa  82.8  0.000000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.966789 
 
 
-
 
NC_011658  BCAH187_A2375  DNA-binding response regulator, LuxR family  30.06 
 
 		 209 aa  82.8  0.000000000000004  Bacillus cereus AH187  Bacteria  normal  0.248491  n/a   
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  29.67 
 
 		 211 aa  82.8  0.000000000000005  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  29.57 
 
 		 216 aa  82.4  0.000000000000005  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  30.09 
 
 		 210 aa  82  0.000000000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  28.65 
 
 		 209 aa  81.3  0.00000000000001  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal  1 
 
 
-
 
NC_011886  Achl_2073  two component transcriptional regulator, LuxR family  29.45 
 
 		 226 aa  81.3  0.00000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000764485 
 
 
-
 
NC_009439  Pmen_4183  two component LuxR family transcriptional regulator  31.05 
 
 		 220 aa  81.3  0.00000000000001  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  29.32 
 
 		 215 aa  81.3  0.00000000000001  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  28.19 
 
 		 225 aa  81.3  0.00000000000001  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  32.78 
 
 		 217 aa  80.9  0.00000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  28.05 
 
 		 231 aa  80.5  0.00000000000002  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  31.75 
 
 		 215 aa  80.9  0.00000000000002  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  28.88 
 
 		 224 aa  80.5  0.00000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  31.07 
 
 		 206 aa  80.5  0.00000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_013739  Cwoe_2525  two component transcriptional regulator, LuxR family  30.91 
 
 		 215 aa  80.9  0.00000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  31.55 
 
 		 212 aa  80.5  0.00000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  31.53 
 
 		 228 aa  80.5  0.00000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  30 
 
 		 218 aa  80.9  0.00000000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  28.78 
 
 		 215 aa  80.1  0.00000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  27.07 
 
 		 231 aa  79.3  0.00000000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  31.22 
 
 		 215 aa  79.3  0.00000000000004  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007513  Syncc9902_0565  LuxR family transcriptional regulator  28.32 
 
 		 239 aa  79.3  0.00000000000004  Synechococcus sp. CC9902  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_0992  regulatory protein, LuxR  29.27 
 
 		 218 aa  79.3  0.00000000000004  Nocardioides sp. JS614  Bacteria  normal  0.850793  n/a   
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  30.89 
 
 		 218 aa  79.7  0.00000000000004  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  29.95 
 
 		 235 aa  79.3  0.00000000000004  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal  1 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  30.95 
 
 		 208 aa  79  0.00000000000005  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  31.22 
 
 		 215 aa  79  0.00000000000006  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  28.05 
 
 		 231 aa  79  0.00000000000006  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  28.07 
 
 		 221 aa  79  0.00000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_011729  PCC7424_0807  two component transcriptional regulator, LuxR family  26.95 
 
 		 228 aa  79  0.00000000000006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.218712 
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  31.18 
 
 		 212 aa  79  0.00000000000006  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  28 
 
 		 213 aa  78.6  0.00000000000008  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  28.96 
 
 		 209 aa  78.6  0.00000000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  30.69 
 
 		 215 aa  78.2  0.00000000000009  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  28.65 
 
 		 213 aa  77.8  0.0000000000001  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  31.22 
 
 		 215 aa  78.2  0.0000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  31.22 
 
 		 215 aa  78.2  0.0000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  31.22 
 
 		 215 aa  78.2  0.0000000000001  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  31.22 
 
 		 215 aa  78.2  0.0000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  29.74 
 
 		 217 aa  77.8  0.0000000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal  1 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  30.34 
 
 		 225 aa  77.8  0.0000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  30.22 
 
 		 216 aa  77.8  0.0000000000001  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  28.74 
 
 		 230 aa  78.2  0.0000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  31.22 
 
 		 215 aa  78.2  0.0000000000001  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  30.22 
 
 		 225 aa  77.8  0.0000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_002950  PG1431  LuxR family DNA-binding response regulator  26.92 
 
 		 227 aa  77.4  0.0000000000002  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.338793 
 
 
-
 
NC_013093  Amir_2811  two component transcriptional regulator, LuxR family  31.12 
 
 		 217 aa  77  0.0000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.206772  n/a   
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  28.57 
 
 		 224 aa  77  0.0000000000002  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  29.7 
 
 		 211 aa  77  0.0000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  30.41 
 
 		 215 aa  77.4  0.0000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  25.13 
 
 		 218 aa  76.6  0.0000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  28.92 
 
 		 226 aa  77.4  0.0000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  30.22 
 
 		 230 aa  76.3  0.0000000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  31.64 
 
 		 218 aa  76.6  0.0000000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  26.29 
 
 		 228 aa  76.6  0.0000000000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  29.44 
 
 		 209 aa  76.6  0.0000000000003  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  28.82 
 
 		 223 aa  76.6  0.0000000000003  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal  1 
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  28.33 
 
 		 211 aa  76.3  0.0000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_4561  two component transcriptional regulator, LuxR family  32.53 
 
 		 217 aa  76.3  0.0000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  27.93 
 
 		 215 aa  76.3  0.0000000000004  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_1938  two component LuxR family transcriptional regulator  30.86 
 
 		 209 aa  76.3  0.0000000000004  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1972  response regulator receiver  30.86 
 
 		 209 aa  76.3  0.0000000000004  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  30.94 
 
 		 220 aa  75.5  0.0000000000006  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  31.07 
 
 		 218 aa  75.5  0.0000000000006  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  31.07 
 
 		 218 aa  75.5  0.0000000000006  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  29.12 
 
 		 220 aa  75.5  0.0000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  29.65 
 
 		 207 aa  75.5  0.0000000000007  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
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