More than 300 homologs were found in PanDaTox collection
for query gene Syncc9902_0565 on replicon NC_007513
Organism: Synechococcus sp. CC9902



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007513  Syncc9902_0565  LuxR family transcriptional regulator  100 
 
 		 239 aa  476  1e-133  Synechococcus sp. CC9902  Bacteria  normal  1  n/a   
 
 
-
 
NC_007516  Syncc9605_2104  two component LuxR family transcriptional regulator  66.95 
 
 		 233 aa  303  1.0000000000000001e-81  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008820  P9303_05591  DNA-binding response regulator  50.43 
 
 		 241 aa  231  7.000000000000001e-60  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.843109 
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.68 
 
 		 223 aa  79.7  0.00000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal  1 
 
 
-
 
NC_007513  Syncc9902_1600  LuxR family transcriptional regulator  28.32 
 
 		 227 aa  79.3  0.00000000000005  Synechococcus sp. CC9902  Bacteria  normal  0.240626  n/a   
 
 
-
 
NC_008820  P9303_12791  hypothetical protein  25.11 
 
 		 233 aa  79.3  0.00000000000005  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.0492582 
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  32.87 
 
 		 209 aa  77  0.0000000000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  31.75 
 
 		 215 aa  74.3  0.000000000002  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009487  SaurJH9_1938  two component LuxR family transcriptional regulator  30.36 
 
 		 209 aa  73.6  0.000000000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1972  response regulator receiver  30.36 
 
 		 209 aa  73.6  0.000000000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_0739  two component transcriptional regulator, LuxR family  35.2 
 
 		 204 aa  73.2  0.000000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.297506  normal  0.226729 
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.98 
 
 		 239 aa  72  0.000000000007  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.711047 
 
 
-
 
NC_002976  SERP1422  DNA-binding response regulator VraR  50.77 
 
 		 209 aa  72  0.000000000008  Staphylococcus epidermidis RP62A  Bacteria  normal  0.871667  n/a   
 
 
-
 
NC_013093  Amir_6962  two component transcriptional regulator, LuxR family  32.47 
 
 		 234 aa  71.6  0.000000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  32.5 
 
 		 233 aa  71.2  0.00000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_0365  two component LuxR family transcriptional regulator  31.25 
 
 		 199 aa  71.6  0.00000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.210231  normal  0.243335 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  53.73 
 
 		 244 aa  71.2  0.00000000001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013161  Cyan8802_3480  two component transcriptional regulator, LuxR family  32.69 
 
 		 210 aa  70.9  0.00000000002  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.147525 
 
 
-
 
NC_007513  Syncc9902_0979  LuxR family transcriptional regulator  27.35 
 
 		 228 aa  70.9  0.00000000002  Synechococcus sp. CC9902  Bacteria  normal  0.012248  n/a   
 
 
-
 
NC_009921  Franean1_0533  two component LuxR family transcriptional regulator  36.13 
 
 		 219 aa  70.9  0.00000000002  Frankia sp. EAN1pec  Bacteria  normal  0.405575  normal  1 
 
 
-
 
NC_011726  PCC8801_2623  two component transcriptional regulator, LuxR family  32.69 
 
 		 210 aa  70.9  0.00000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  31.11 
 
 		 214 aa  70.1  0.00000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.785726 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  29.66 
 
 		 216 aa  70.1  0.00000000003  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  44.32 
 
 		 210 aa  70.1  0.00000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  36.69 
 
 		 221 aa  69.7  0.00000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  32.6 
 
 		 216 aa  68.9  0.00000000007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_0804  two component LuxR family transcriptional regulator  32 
 
 		 229 aa  68.9  0.00000000007  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  44.83 
 
 		 210 aa  68.9  0.00000000007  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  43.68 
 
 		 210 aa  68.6  0.00000000008  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  43.68 
 
 		 210 aa  68.6  0.00000000008  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  43.68 
 
 		 210 aa  68.6  0.00000000008  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  43.68 
 
 		 210 aa  68.6  0.00000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  28.49 
 
 		 213 aa  68.6  0.00000000008  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_1619  two component LuxR family transcriptional regulator  34.38 
 
 		 163 aa  68.6  0.00000000008  Mycobacterium sp. MCS  Bacteria  normal  0.113726  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  43.68 
 
 		 210 aa  68.6  0.00000000008  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_008705  Mkms_1644  two component LuxR family transcriptional regulator  34.38 
 
 		 163 aa  68.6  0.00000000008  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  43.68 
 
 		 210 aa  68.6  0.00000000008  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  43.68 
 
 		 210 aa  68.6  0.00000000008  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  43.68 
 
 		 210 aa  68.6  0.00000000008  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  43.68 
 
 		 210 aa  68.6  0.00000000009  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_009077  Mjls_1592  two component LuxR family transcriptional regulator  34.38 
 
 		 162 aa  68.6  0.00000000009  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  47.22 
 
 		 225 aa  68.6  0.00000000009  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  52.31 
 
 		 213 aa  68.6  0.00000000009  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  48.57 
 
 		 213 aa  68.2  0.0000000001  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_007410  Ava_B0209  two component LuxR family transcriptional regulator  35.06 
 
 		 223 aa  68.2  0.0000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  55.38 
 
 		 234 aa  67.8  0.0000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_014151  Cfla_3337  two component transcriptional regulator, LuxR family  42.57 
 
 		 254 aa  68.2  0.0000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0952095  normal  0.130531 
 
 
-
 
NC_013441  Gbro_3475  response regulator receiver  32.26 
 
 		 228 aa  67.8  0.0000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.849127  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  27.19 
 
 		 215 aa  67.4  0.0000000002  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_5070  two component transcriptional regulator, LuxR family  31.08 
 
 		 210 aa  66.6  0.0000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.744929 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  27.19 
 
 		 215 aa  66.6  0.0000000003  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  26.39 
 
 		 222 aa  66.6  0.0000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  28.19 
 
 		 215 aa  66.6  0.0000000004  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  29.21 
 
 		 228 aa  66.2  0.0000000004  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  25.93 
 
 		 220 aa  66.6  0.0000000004  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  28.19 
 
 		 215 aa  65.9  0.0000000005  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  28.19 
 
 		 215 aa  65.9  0.0000000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  28.19 
 
 		 215 aa  65.9  0.0000000005  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  28.19 
 
 		 215 aa  65.9  0.0000000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  29.1 
 
 		 218 aa  66.2  0.0000000005  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.06 
 
 		 226 aa  66.2  0.0000000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  33.68 
 
 		 225 aa  66.2  0.0000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  28.19 
 
 		 215 aa  65.9  0.0000000005  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_011663  Sbal223_3070  two component transcriptional regulator, LuxR family  28.65 
 
 		 216 aa  65.9  0.0000000006  Shewanella baltica OS223  Bacteria  decreased coverage  0.000689776  unclonable  0.00000000000283062 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  33.97 
 
 		 226 aa  65.9  0.0000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  47.14 
 
 		 214 aa  65.9  0.0000000006  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  26.83 
 
 		 207 aa  65.9  0.0000000006  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  26.83 
 
 		 207 aa  65.9  0.0000000006  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_009665  Shew185_1285  two component LuxR family transcriptional regulator  28.65 
 
 		 216 aa  65.9  0.0000000006  Shewanella baltica OS185  Bacteria  decreased coverage  0.000337392  n/a   
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  31.25 
 
 		 234 aa  65.9  0.0000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal  1 
 
 
-
 
NC_013159  Svir_38740  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.48 
 
 		 250 aa  65.5  0.0000000007  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  26.11 
 
 		 213 aa  65.5  0.0000000007  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  28.19 
 
 		 215 aa  65.5  0.0000000008  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  52.38 
 
 		 228 aa  65.5  0.0000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_1241  two component LuxR family transcriptional regulator  28.65 
 
 		 216 aa  65.1  0.0000000009  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000399601  n/a   
 
 
-
 
NC_008010  Dgeo_2846  two component LuxR family transcriptional regulator  30.81 
 
 		 209 aa  64.7  0.000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_011726  PCC8801_1927  two component transcriptional regulator, LuxR family  32.64 
 
 		 221 aa  65.1  0.000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  29.9 
 
 		 216 aa  64.7  0.000000001  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_013161  Cyan8802_1954  two component transcriptional regulator, LuxR family  32.64 
 
 		 221 aa  65.1  0.000000001  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.682063 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  34.19 
 
 		 229 aa  64.3  0.000000002  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  25 
 
 		 223 aa  63.9  0.000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_011729  PCC7424_0031  two component transcriptional regulator, LuxR family  30.22 
 
 		 229 aa  64.3  0.000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  28.18 
 
 		 221 aa  64.3  0.000000002  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  29.22 
 
 		 215 aa  64.3  0.000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0253  two component transcriptional regulator, LuxR family  54.29 
 
 		 218 aa  64.3  0.000000002  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.649746 
 
 
-
 
NC_009997  Sbal195_1319  two component LuxR family transcriptional regulator  28.73 
 
 		 216 aa  63.9  0.000000002  Shewanella baltica OS195  Bacteria  normal  0.0542522  decreased coverage  0.000972679 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  46.81 
 
 		 230 aa  64.3  0.000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_4561  two component transcriptional regulator, LuxR family  32.03 
 
 		 217 aa  63.9  0.000000002  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  26.2 
 
 		 213 aa  64.3  0.000000002  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.000000185138 
 
 
-
 
NC_013132  Cpin_1732  two component transcriptional regulator, LuxR family  28.76 
 
 		 211 aa  63.9  0.000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  28.38 
 
 		 220 aa  64.3  0.000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  26.26 
 
 		 213 aa  64.3  0.000000002  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_002976  SERP1384  LuxR family DNA-binding response regulator  25.71 
 
 		 207 aa  63.5  0.000000003  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.000639089  n/a   
 
 
-
 
NC_003909  BCE_2293  LuxR family DNA-binding response regulator  25.73 
 
 		 211 aa  63.2  0.000000003  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  28.8 
 
 		 219 aa  63.2  0.000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_011369  Rleg2_1389  two component transcriptional regulator, LuxR family  29.51 
 
 		 206 aa  63.5  0.000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.744509  normal  1 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  30.43 
 
 		 215 aa  63.5  0.000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  34.04 
 
 		 225 aa  63.5  0.000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  49.21 
 
 		 248 aa  63.5  0.000000003  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_009972  Haur_1563  two component LuxR family transcriptional regulator  27.94 
 
 		 257 aa  63.2  0.000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.781509  n/a   
 
 
-
 
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