More than 300 homologs were found in PanDaTox collection
for query gene Smed_2229 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012850  Rleg_2965  carbamoyl phosphate synthase small subunit  87.53 
 
 		 403 aa  737    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.0448128 
 
 
-
 
NC_011989  Avi_3111  carbamoyl phosphate synthase small subunit  84.42 
 
 		 406 aa  717    Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_2083  carbamoyl phosphate synthase small subunit  76.31 
 
 		 399 aa  648    Chelativorans sp. BNC1  Bacteria  normal  0.321442  n/a   
 
 
-
 
NC_011369  Rleg2_2706  carbamoyl phosphate synthase small subunit  87.53 
 
 		 403 aa  739    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_2229  carbamoyl phosphate synthase small subunit  100 
 
 		 401 aa  825    Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_1683  carbamoyl phosphate synthase small subunit  76.06 
 
 		 407 aa  632  1e-180  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR1483  carbamoyl phosphate synthase small subunit  77.44 
 
 		 407 aa  627  1e-179  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009505  BOV_1439  carbamoyl phosphate synthase small subunit  77.44 
 
 		 407 aa  628  1e-179  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_6791  carbamoyl phosphate synthase small subunit  69.07 
 
 		 398 aa  581  1.0000000000000001e-165  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.0374748 
 
 
-
 
NC_011004  Rpal_1470  carbamoyl phosphate synthase small subunit  69.92 
 
 		 397 aa  581  1.0000000000000001e-165  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_2446  carbamoyl phosphate synthase small subunit  69.33 
 
 		 396 aa  579  1e-164  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.505949  normal  0.289169 
 
 
-
 
NC_007778  RPB_4142  carbamoyl phosphate synthase small subunit  69.82 
 
 		 397 aa  580  1e-164  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.164526  normal  1 
 
 
-
 
NC_007958  RPD_3986  carbamoyl phosphate synthase small subunit  69.31 
 
 		 397 aa  578  1e-164  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008783  BARBAKC583_0972  carbamoyl phosphate synthase small subunit  70.5 
 
 		 399 aa  575  1.0000000000000001e-163  Bartonella bacilliformis KC583  Bacteria  normal  0.0520373  n/a   
 
 
-
 
NC_007925  RPC_0960  carbamoyl phosphate synthase small subunit  68.94 
 
 		 396 aa  577  1.0000000000000001e-163  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.0203745 
 
 
-
 
NC_007964  Nham_2871  carbamoyl phosphate synthase small subunit  68.04 
 
 		 396 aa  575  1.0000000000000001e-163  Nitrobacter hamburgensis X14  Bacteria  normal  0.393325  n/a   
 
 
-
 
NC_009719  Plav_2314  carbamoyl-phosphate synthase, small subunit  67.6 
 
 		 402 aa  555  1e-157  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.0322598 
 
 
-
 
NC_009720  Xaut_1243  carbamoyl phosphate synthase small subunit  68.56 
 
 		 411 aa  557  1e-157  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_1622  carbamoyl-phosphate synthase, small subunit  67.26 
 
 		 398 aa  544  1e-153  Methylocella silvestris BL2  Bacteria  n/a    decreased coverage  0.0014107 
 
 
-
 
NC_011894  Mnod_4526  carbamoyl-phosphate synthase, small subunit  67.52 
 
 		 405 aa  540  9.999999999999999e-153  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.717788  n/a   
 
 
-
 
NC_010511  M446_3210  carbamoyl-phosphate synthase, small subunit  65.72 
 
 		 405 aa  525  1e-148  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.295908 
 
 
-
 
NC_010172  Mext_0615  carbamoyl-phosphate synthase, small subunit  66.5 
 
 		 416 aa  523  1e-147  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.156891 
 
 
-
 
NC_011757  Mchl_0626  carbamoyl-phosphate synthase, small subunit  66.5 
 
 		 416 aa  523  1e-147  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.265795 
 
 
-
 
NC_010725  Mpop_0591  carbamoyl-phosphate synthase, small subunit  66.84 
 
 		 416 aa  520  1e-146  Methylobacterium populi BJ001  Bacteria  normal  0.88824  normal  0.101077 
 
 
-
 
NC_007643  Rru_A2885  carbamoyl-phosphate synthase small subunit  64.89 
 
 		 389 aa  516  1.0000000000000001e-145  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_0570  carbamoyl-phosphate synthase, small subunit  65.47 
 
 		 410 aa  513  1e-144  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.308304 
 
 
-
 
NC_008044  TM1040_2294  carbamoyl phosphate synthase small subunit  64.06 
 
 		 386 aa  504  9.999999999999999e-143  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_1037  carbamoyl phosphate synthase small subunit  65.09 
 
 		 388 aa  508  9.999999999999999e-143  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009049  Rsph17029_0524  carbamoyl phosphate synthase small subunit  65.05 
 
 		 387 aa  503  1e-141  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.29904  normal  1 
 
 
-
 
NC_007802  Jann_1246  carbamoyl phosphate synthase small subunit  64.3 
 
 		 384 aa  504  1e-141  Jannaschia sp. CCS1  Bacteria  normal  0.55567  normal  1 
 
 
-
 
NC_010581  Bind_3531  carbamoyl-phosphate synthase, small subunit  62.37 
 
 		 421 aa  500  1e-140  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.56559  normal  1 
 
 
-
 
NC_009428  Rsph17025_0661  carbamoyl phosphate synthase small subunit  64.61 
 
 		 387 aa  501  1e-140  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.693727  normal  0.143114 
 
 
-
 
NC_008686  Pden_2165  carbamoyl phosphate synthase small subunit  63.31 
 
 		 382 aa  495  1e-139  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_1874  carbamoyl phosphate synthase small subunit  63.98 
 
 		 387 aa  491  9.999999999999999e-139  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.330959  n/a   
 
 
-
 
NC_009952  Dshi_2387  carbamoyl phosphate synthase small subunit  64.61 
 
 		 389 aa  492  9.999999999999999e-139  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0953377  normal  0.858607 
 
 
-
 
NC_009511  Swit_0435  carbamoyl phosphate synthase small subunit  61.05 
 
 		 392 aa  488  1e-137  Sphingomonas wittichii RW1  Bacteria  normal  0.29183  normal  1 
 
 
-
 
NC_011365  Gdia_3032  carbamoyl phosphate synthase small subunit  58.53 
 
 		 467 aa  444  1e-123  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.11486  normal  0.0418192 
 
 
-
 
NC_008048  Sala_0983  carbamoyl phosphate synthase small subunit  56.1 
 
 		 423 aa  438  9.999999999999999e-123  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.2906  normal  1 
 
 
-
 
NC_007794  Saro_2231  carbamoyl phosphate synthase small subunit  59.42 
 
 		 391 aa  437  1e-121  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.961008  n/a   
 
 
-
 
NC_009484  Acry_0912  carbamoyl phosphate synthase small subunit  57.26 
 
 		 447 aa  428  1e-118  Acidiphilium cryptum JF-5  Bacteria  normal  0.203932  n/a   
 
 
-
 
NC_008347  Mmar10_2132  carbamoyl-phosphate synthase small subunit  57.56 
 
 		 390 aa  427  1e-118  Maricaulis maris MCS10  Bacteria  normal  1  normal  0.172352 
 
 
-
 
NC_011662  Tmz1t_1731  carbamoyl phosphate synthase small subunit  54.31 
 
 		 380 aa  400  9.999999999999999e-111  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  53.81 
 
 		 378 aa  389  1e-107  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  53.14 
 
 		 440 aa  387  1e-106  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  53 
 
 		 391 aa  386  1e-106  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  52.74 
 
 		 382 aa  386  1e-106  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  53 
 
 		 382 aa  387  1e-106  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  52.74 
 
 		 382 aa  386  1e-106  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002977  MCA1853  carbamoyl phosphate synthase small subunit  53.26 
 
 		 378 aa  384  1e-105  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0936768  n/a   
 
 
-
 
NC_003295  RSc1519  carbamoyl phosphate synthase small subunit  51.69 
 
 		 378 aa  382  1e-105  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  54.62 
 
 		 381 aa  383  1e-105  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  51.4 
 
 		 397 aa  383  1e-105  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  54.13 
 
 		 378 aa  382  1e-105  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal  1 
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  51.93 
 
 		 385 aa  382  1e-105  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal  1 
 
 
-
 
NC_011992  Dtpsy_1456  carbamoyl-phosphate synthase, small subunit  53.61 
 
 		 390 aa  382  1e-105  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  54.09 
 
 		 385 aa  382  1e-105  Shewanella sediminis HAW-EB3  Bacteria  normal  1  hitchhiker  0.0000786314 
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  52.22 
 
 		 382 aa  382  1e-105  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_007963  Csal_3086  carbamoyl-phosphate synthase small subunit  51.05 
 
 		 381 aa  384  1e-105  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0580438  n/a   
 
 
-
 
NC_008782  Ajs_2392  carbamoyl-phosphate synthase small subunit  53.61 
 
 		 390 aa  382  1e-105  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  52.71 
 
 		 393 aa  382  1e-105  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.0283036 
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  53.87 
 
 		 378 aa  381  1e-104  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  51.3 
 
 		 381 aa  380  1e-104  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_010513  Xfasm12_0451  carbamoyl phosphate synthase small subunit  53.19 
 
 		 399 aa  380  1e-104  Xylella fastidiosa M12  Bacteria  normal  0.758109  n/a   
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  53.19 
 
 		 390 aa  378  1e-104  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  51.56 
 
 		 381 aa  381  1e-104  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_007520  Tcr_0878  carbamoyl-phosphate synthase, small subunit  52.88 
 
 		 378 aa  379  1e-104  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  53.68 
 
 		 382 aa  379  1e-104  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  51.82 
 
 		 381 aa  380  1e-104  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  51.3 
 
 		 381 aa  380  1e-104  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  51.3 
 
 		 381 aa  380  1e-104  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  53.4 
 
 		 381 aa  380  1e-104  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  51.3 
 
 		 381 aa  379  1e-104  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  51.56 
 
 		 381 aa  380  1e-104  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_010524  Lcho_2823  carbamoyl-phosphate synthase, small subunit  52.58 
 
 		 394 aa  380  1e-104  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  51.3 
 
 		 381 aa  380  1e-104  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
CP001509  ECD_00036  carbamoyl-phosphate synthase small subunit  51.96 
 
 		 382 aa  375  1e-103  Escherichia coli BL21(DE3)  Bacteria  normal  0.53844  n/a   
 
 
-
 
CP001637  EcDH1_3567  carbamoyl-phosphate synthase, small subunit  51.96 
 
 		 382 aa  375  1e-103  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_0033  carbamoyl phosphate synthase small subunit  51.96 
 
 		 382 aa  375  1e-103  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_012892  B21_00035  hypothetical protein  51.96 
 
 		 382 aa  375  1e-103  Escherichia coli BL21  Bacteria  normal  0.457385  n/a   
 
 
-
 
NC_010577  XfasM23_0392  carbamoyl phosphate synthase small subunit  53.19 
 
 		 399 aa  377  1e-103  Xylella fastidiosa M23  Bacteria  normal  0.166847  n/a   
 
 
-
 
NC_011353  ECH74115_0035  carbamoyl phosphate synthase small subunit  51.96 
 
 		 382 aa  375  1e-103  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1261  carbamoyl-phosphate synthase small subunit  52.66 
 
 		 383 aa  376  1e-103  Methylibium petroleiphilum PM1  Bacteria  normal  1  decreased coverage  0.00672288 
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  50.91 
 
 		 384 aa  376  1e-103  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_010658  SbBS512_E0036  carbamoyl phosphate synthase small subunit  51.96 
 
 		 382 aa  375  1e-103  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  50.91 
 
 		 383 aa  375  1e-103  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A0035  carbamoyl phosphate synthase small subunit  51.96 
 
 		 382 aa  375  1e-103  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  53.18 
 
 		 401 aa  377  1e-103  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_2615  carbamoyl phosphate synthase small subunit  53.23 
 
 		 389 aa  375  1e-103  Variovorax paradoxus S110  Bacteria  normal  0.218889  n/a   
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  51.04 
 
 		 381 aa  377  1e-103  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_010498  EcSMS35_0032  carbamoyl phosphate synthase small subunit  51.96 
 
 		 391 aa  375  1e-103  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_2610  carbamoyl-phosphate synthase, small subunit  51.67 
 
 		 392 aa  373  1e-102  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.752092 
 
 
-
 
NC_009436  Ent638_0591  carbamoyl phosphate synthase small subunit  51.96 
 
 		 382 aa  374  1e-102  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007404  Tbd_1127  carbamoyl-phosphate synthase small subunit  53.83 
 
 		 379 aa  375  1e-102  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.390679  normal  1 
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  50.38 
 
 		 387 aa  375  1e-102  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal  1 
 
 
-
 
NC_007951  Bxe_A1256  carbamoyl phosphate synthase small subunit  52.63 
 
 		 391 aa  372  1e-102  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010468  EcolC_3623  carbamoyl phosphate synthase small subunit  51.96 
 
 		 382 aa  373  1e-102  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.314254 
 
 
-
 
NC_008340  Mlg_1982  carbamoyl-phosphate synthase small subunit  51.79 
 
 		 386 aa  373  1e-102  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.157941  normal  0.0125598 
 
 
-
 
NC_008463  PA14_62930  carbamoyl phosphate synthase small subunit  52.33 
 
 		 378 aa  374  1e-102  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008542  Bcen2424_1290  carbamoyl phosphate synthase small subunit  51.58 
 
 		 380 aa  374  1e-102  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0948613  n/a   
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  52.36 
 
 		 381 aa  372  1e-102  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal  1 
 
 
-
 
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