| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0983 |
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| Symbol | |
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| ID | 4079982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1008171 |
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| End bp | 1009442 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009343 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_616033 |
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| Protein GI | 103486472 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.2906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCAG CCAACCCATC AGTCGCGCCC AAAAGCCAGC CGTCCGGCGC CACCGGCGTC
CTCGTCCTTG CCGACGGCAC CATCCTGTGG GGCGTCGGTT ATGGCGCGAG CGGGGCCGCG
GCAGGCGAGA TTTGTTTCAA CACGTCGATG ACCGGCTATC AGGAAATCCT GACCGACCCC
AGCTACGCCG GGCAGATCAT CACCTTCACC TTTCCGCACA TCGGCAATGT CGGCGCGAAC
CCGGAGGATA TGGAGCGCAG CGTCCACGGT GCGCTCGGCG CGATCACGCG CGAGCTGCCG
ACGGCGCCCA GCAATTTTCG AAGCGTGCAG ACCCTGCCCG AATGGATGAC GGAGCAGGGG
GTGATCGGGC TGGCGGGCAT CGACACGCGC GCGCTGACGC GGCGCATCCG CGATGCAGGC
GCGCCGAACG GGGTGATCGC GCACAGCCCG GACGCCAAGT TTGACATTGA CGCGCTGCTG
GCGATGGCGC GGGGTTGGCC GGGGCTGGAG GGGCTGGACC TCGCGAAGAC CGTCAGCCGG
ACCGATACGG GTGAGTGGAC CGGCGGTATT TGGGCTCTCG GTAAGGGTTA TCAAACCCCG
TTCGCATCGA GCGAAGTCGA GATGCCCATC GACGGCGCAC GACCTCATGG TGTCTCGACT
TCGCTCGACA CGAACGGGAA TGGGGCGACG GCTCAAGCCC GCCCCCATGT CGTCGCGATC
GACTATGGCG CAAAGGACAA TATCTTCCGG AGCCTCGTGA AGGCCGGCGC GCGCGTCACC
GTGGTGCCCG CGACCGCGAG CCTCGACGAG GTGCTGGCGC TGGAGCCCGC GGGGGTGTTC
CTGTCGAACG GCCCCGGCGA TCCGGCGGCG ACGGGCGACT ATGCGGTGCC GGTGATCCAG
GGGCTGCTCG AACGCAATGT CCCGATCTTC GGTATCTGCC TCGGCCACCA GCTGCTCGCG
CTCGCCGCGG GCGCCCGGAC GGTGAAGATG CACCAGGGTC ACCGCGGCGC GAACCATCCG
GTCCAGCGCG TCGGCGGCGA TTTCGCCGAC GGCGTGGTCG AGATCACCAG CATGAACCAC
GGCTTCGCGG TCGACGCCTC GACCTTGCCC GCGGGCGTGG TCGAAACGCA CAAGAGCCTG
TTCGACGGAT CGAACTGCGG CATCGCGATC ACGGGCAAAA ATGCGTTCAG CGTACAATAT
CACCCCGAGG CGAGCCCGGG GCCGCAGGAC AGTTTCTATC TGTTCGAGAA GTTTGTGGGC
GGGCTTCGTT AA
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| Protein sequence | MAPANPSVAP KSQPSGATGV LVLADGTILW GVGYGASGAA AGEICFNTSM TGYQEILTDP
SYAGQIITFT FPHIGNVGAN PEDMERSVHG ALGAITRELP TAPSNFRSVQ TLPEWMTEQG
VIGLAGIDTR ALTRRIRDAG APNGVIAHSP DAKFDIDALL AMARGWPGLE GLDLAKTVSR
TDTGEWTGGI WALGKGYQTP FASSEVEMPI DGARPHGVST SLDTNGNGAT AQARPHVVAI
DYGAKDNIFR SLVKAGARVT VVPATASLDE VLALEPAGVF LSNGPGDPAA TGDYAVPVIQ
GLLERNVPIF GICLGHQLLA LAAGARTVKM HQGHRGANHP VQRVGGDFAD GVVEITSMNH
GFAVDASTLP AGVVETHKSL FDGSNCGIAI TGKNAFSVQY HPEASPGPQD SFYLFEKFVG
GLR
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