| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3111 |
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| Symbol | carA |
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| ID | 7388656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2585443 |
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| End bp | 2586663 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652060 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_002550244 |
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| Protein GI | 222149287 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAA CATCGCCATT GCCCACCGCA GCCTGGACAA CAACCAAGCC GACAGCGCTT
CTGGTTCTGG CTGACGGCAC CGTCATCGAA GGTCAGGGCG TCGGCGCCAC CGGCGATGTT
CAGGCCGAGG TGTGCTTCAA CACCGCGCTG ACCGGCTATG AGGAAATCCT CACCGATCCC
TCCTATCTCG GCCAGATCGT TACCTTCACC TTTCCCCATA TCGGCAATGT CGGCACCAAT
GAGGAAGACA TTGAAGACCT GACGCCTGCC GCCCGCCACG GCGCGGTCGG GGTGATCTTC
AAGGCCGATA TTACCGAGCC CTCCAATTTC CGCGCCACCA AGCACCTGGA TACCTGGTTG
AAGGCACGCG GCATGATCGG CCTGTCTGGC GTCGATACGC GGGCGCTGAC CGCCTGGATT
CGCGAAAACG GTGCGCCAAA CGCCGTCATC GCCCATGACC CGAACGGCAA TTTCGACATT
GAGGCGCTGA AGGCCAAGGC CAAGGCCTGG AGCGGGCTGG AAGGTCTTGA TCTTGCCAAG
GTCGCTTCCT CCGGCCAGTC CTCGACCTGG GGCGAAAAGC CATGGGTCTG GAATGAAGGC
TTTTCCGAAC TGGCTGACAA GGATGCCGAT TATCACGTCG TCTGCGTGGA TTTCGGCGTG
AAGCGCAATA TCCTGCGGCT GTTCACCGGC CTGAAATGTA AGGTCACGGT CGTGCCTGCC
AATACCAGCG CCGAAGATAT CCTGGCGCTG TCGCCGGATG GCATTTTCCT CTCCAATGGC
CCTGGTGATC CGGCGGCAAC AGGGGAATAT GCCGTGCCCG TGATCAAGGA ACTGATCGAG
ACCGATATCC CGTTGTTCGG TATTTGCCTT GGCCATCAGA TGCTGGGTCT GGCGCTGGGC
GCCAAGACTG AGAAGATGCA TCAGGGCCAT CACGGCGCCA ACCATCCGGT TAAGGATTTC
ACCACCGGCA AGGTGGAGAT CGTCTCGATG AACCACGGCT TCGCGGTGGA TTCGAAGTCT
CTGCCGGAAG GCGTTGAAGA GACTCATATT TCGCTGTTCG ACAACACCAA TTGCGGCCTG
CGCCTGACCG GCAAGCCGGT GTTTTCCGTT CAGCACCACC CGGAAGCATC GCCCGGCCCG
CAAGACAGCC ATTACCTGTT CCGCCGCTTC ATCAACATGG TGCGCGAGAA GAAGGGCGAA
CCGGCTTTAG CCGAGCGCTG A
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| Protein sequence | MTATSPLPTA AWTTTKPTAL LVLADGTVIE GQGVGATGDV QAEVCFNTAL TGYEEILTDP
SYLGQIVTFT FPHIGNVGTN EEDIEDLTPA ARHGAVGVIF KADITEPSNF RATKHLDTWL
KARGMIGLSG VDTRALTAWI RENGAPNAVI AHDPNGNFDI EALKAKAKAW SGLEGLDLAK
VASSGQSSTW GEKPWVWNEG FSELADKDAD YHVVCVDFGV KRNILRLFTG LKCKVTVVPA
NTSAEDILAL SPDGIFLSNG PGDPAATGEY AVPVIKELIE TDIPLFGICL GHQMLGLALG
AKTEKMHQGH HGANHPVKDF TTGKVEIVSM NHGFAVDSKS LPEGVEETHI SLFDNTNCGL
RLTGKPVFSV QHHPEASPGP QDSHYLFRRF INMVREKKGE PALAER
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