More than 300 homologs were found in PanDaTox collection
for query gene RSP_1874 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009428  Rsph17025_0661  carbamoyl phosphate synthase small subunit  93.07 
 
 		 387 aa  726    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.693727  normal  0.143114 
 
 
-
 
NC_007493  RSP_1874  carbamoyl phosphate synthase small subunit  100 
 
 		 387 aa  798    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.330959  n/a   
 
 
-
 
NC_009049  Rsph17029_0524  carbamoyl phosphate synthase small subunit  97.87 
 
 		 387 aa  753    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.29904  normal  1 
 
 
-
 
NC_008044  TM1040_2294  carbamoyl phosphate synthase small subunit  79.95 
 
 		 386 aa  633  1e-180  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_2387  carbamoyl phosphate synthase small subunit  82.11 
 
 		 389 aa  633  1e-180  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0953377  normal  0.858607 
 
 
-
 
NC_007802  Jann_1246  carbamoyl phosphate synthase small subunit  79.1 
 
 		 384 aa  625  1e-178  Jannaschia sp. CCS1  Bacteria  normal  0.55567  normal  1 
 
 
-
 
NC_008686  Pden_2165  carbamoyl phosphate synthase small subunit  76.72 
 
 		 382 aa  614  1e-175  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_2314  carbamoyl-phosphate synthase, small subunit  64.43 
 
 		 402 aa  514  1e-144  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.0322598 
 
 
-
 
NC_007778  RPB_4142  carbamoyl phosphate synthase small subunit  63.73 
 
 		 397 aa  506  9.999999999999999e-143  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.164526  normal  1 
 
 
-
 
NC_011004  Rpal_1470  carbamoyl phosphate synthase small subunit  63.21 
 
 		 397 aa  504  1e-141  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_2229  carbamoyl phosphate synthase small subunit  62.92 
 
 		 401 aa  499  1e-140  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_3986  carbamoyl phosphate synthase small subunit  62.69 
 
 		 397 aa  500  1e-140  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_6791  carbamoyl phosphate synthase small subunit  62.53 
 
 		 398 aa  498  1e-140  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.0374748 
 
 
-
 
NC_007643  Rru_A2885  carbamoyl-phosphate synthase small subunit  64.43 
 
 		 389 aa  496  1e-139  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_0960  carbamoyl phosphate synthase small subunit  61.6 
 
 		 396 aa  494  1e-139  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.0203745 
 
 
-
 
NC_008254  Meso_2083  carbamoyl phosphate synthase small subunit  62.4 
 
 		 399 aa  497  1e-139  Chelativorans sp. BNC1  Bacteria  normal  0.321442  n/a   
 
 
-
 
NC_007964  Nham_2871  carbamoyl phosphate synthase small subunit  61.03 
 
 		 396 aa  491  9.999999999999999e-139  Nitrobacter hamburgensis X14  Bacteria  normal  0.393325  n/a   
 
 
-
 
NC_011369  Rleg2_2706  carbamoyl phosphate synthase small subunit  61.07 
 
 		 403 aa  489  1e-137  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_2965  carbamoyl phosphate synthase small subunit  61.07 
 
 		 403 aa  490  1e-137  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.0448128 
 
 
-
 
NC_011989  Avi_3111  carbamoyl phosphate synthase small subunit  60.93 
 
 		 406 aa  491  1e-137  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_1683  carbamoyl phosphate synthase small subunit  62.83 
 
 		 407 aa  490  1e-137  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_2446  carbamoyl phosphate synthase small subunit  60.77 
 
 		 396 aa  486  1e-136  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.505949  normal  0.289169 
 
 
-
 
NC_009720  Xaut_1243  carbamoyl phosphate synthase small subunit  62.14 
 
 		 411 aa  486  1e-136  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_0435  carbamoyl phosphate synthase small subunit  61.3 
 
 		 392 aa  482  1e-135  Sphingomonas wittichii RW1  Bacteria  normal  0.29183  normal  1 
 
 
-
 
NC_009505  BOV_1439  carbamoyl phosphate synthase small subunit  62.73 
 
 		 407 aa  481  1e-135  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_1037  carbamoyl phosphate synthase small subunit  62.53 
 
 		 388 aa  482  1e-135  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004310  BR1483  carbamoyl phosphate synthase small subunit  62.73 
 
 		 407 aa  481  1e-134  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_3210  carbamoyl-phosphate synthase, small subunit  62.6 
 
 		 405 aa  471  1e-132  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.295908 
 
 
-
 
NC_011894  Mnod_4526  carbamoyl-phosphate synthase, small subunit  61.84 
 
 		 405 aa  472  1e-132  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.717788  n/a   
 
 
-
 
NC_008783  BARBAKC583_0972  carbamoyl phosphate synthase small subunit  58.71 
 
 		 399 aa  463  1e-129  Bartonella bacilliformis KC583  Bacteria  normal  0.0520373  n/a   
 
 
-
 
NC_011666  Msil_1622  carbamoyl-phosphate synthase, small subunit  59.06 
 
 		 398 aa  457  1e-127  Methylocella silvestris BL2  Bacteria  n/a    decreased coverage  0.0014107 
 
 
-
 
NC_010172  Mext_0615  carbamoyl-phosphate synthase, small subunit  61.05 
 
 		 416 aa  452  1.0000000000000001e-126  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.156891 
 
 
-
 
NC_010505  Mrad2831_0570  carbamoyl-phosphate synthase, small subunit  61.64 
 
 		 410 aa  452  1.0000000000000001e-126  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.308304 
 
 
-
 
NC_011757  Mchl_0626  carbamoyl-phosphate synthase, small subunit  61.05 
 
 		 416 aa  452  1.0000000000000001e-126  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.265795 
 
 
-
 
NC_011365  Gdia_3032  carbamoyl phosphate synthase small subunit  59.53 
 
 		 467 aa  450  1e-125  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.11486  normal  0.0418192 
 
 
-
 
NC_010725  Mpop_0591  carbamoyl-phosphate synthase, small subunit  61.05 
 
 		 416 aa  451  1e-125  Methylobacterium populi BJ001  Bacteria  normal  0.88824  normal  0.101077 
 
 
-
 
NC_009484  Acry_0912  carbamoyl phosphate synthase small subunit  59.33 
 
 		 447 aa  446  1.0000000000000001e-124  Acidiphilium cryptum JF-5  Bacteria  normal  0.203932  n/a   
 
 
-
 
NC_010581  Bind_3531  carbamoyl-phosphate synthase, small subunit  57.92 
 
 		 421 aa  442  1e-123  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.56559  normal  1 
 
 
-
 
NC_008048  Sala_0983  carbamoyl phosphate synthase small subunit  55.32 
 
 		 423 aa  435  1e-121  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.2906  normal  1 
 
 
-
 
NC_007794  Saro_2231  carbamoyl phosphate synthase small subunit  58.7 
 
 		 391 aa  429  1e-119  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.961008  n/a   
 
 
-
 
NC_008347  Mmar10_2132  carbamoyl-phosphate synthase small subunit  55.82 
 
 		 390 aa  413  1e-114  Maricaulis maris MCS10  Bacteria  normal  1  normal  0.172352 
 
 
-
 
NC_011662  Tmz1t_1731  carbamoyl phosphate synthase small subunit  55.97 
 
 		 380 aa  410  1e-113  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_007963  Csal_3086  carbamoyl-phosphate synthase small subunit  54.5 
 
 		 381 aa  403  1e-111  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0580438  n/a   
 
 
-
 
NC_010513  Xfasm12_0451  carbamoyl phosphate synthase small subunit  54.09 
 
 		 399 aa  401  9.999999999999999e-111  Xylella fastidiosa M12  Bacteria  normal  0.758109  n/a   
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  53.54 
 
 		 381 aa  400  9.999999999999999e-111  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  53.46 
 
 		 378 aa  399  9.999999999999999e-111  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  54.13 
 
 		 381 aa  400  9.999999999999999e-111  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  53.46 
 
 		 378 aa  399  9.999999999999999e-111  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal  1 
 
 
-
 
NC_010577  XfasM23_0392  carbamoyl phosphate synthase small subunit  54.42 
 
 		 399 aa  399  9.999999999999999e-111  Xylella fastidiosa M23  Bacteria  normal  0.166847  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  53.28 
 
 		 381 aa  398  1e-109  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc1519  carbamoyl phosphate synthase small subunit  52.77 
 
 		 378 aa  397  1e-109  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  53.28 
 
 		 381 aa  398  1e-109  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  53.52 
 
 		 390 aa  395  1e-109  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  53.28 
 
 		 381 aa  398  1e-109  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  53.21 
 
 		 380 aa  395  1e-109  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal  1 
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  53.02 
 
 		 381 aa  395  1e-109  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_007951  Bxe_A1256  carbamoyl phosphate synthase small subunit  54.67 
 
 		 391 aa  395  1e-109  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008060  Bcen_0809  carbamoyl phosphate synthase small subunit  53.21 
 
 		 380 aa  397  1e-109  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  53.02 
 
 		 381 aa  397  1e-109  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_010508  Bcenmc03_1261  carbamoyl phosphate synthase small subunit  53.21 
 
 		 380 aa  398  1e-109  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0131767  normal  0.191599 
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  53.28 
 
 		 381 aa  398  1e-109  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  53.02 
 
 		 381 aa  396  1e-109  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_010681  Bphyt_2868  carbamoyl phosphate synthase small subunit  54.13 
 
 		 384 aa  395  1e-109  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00228162  normal  1 
 
 
-
 
NC_008542  Bcen2424_1290  carbamoyl phosphate synthase small subunit  53.21 
 
 		 380 aa  397  1e-109  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0948613  n/a   
 
 
-
 
NC_002947  PP_4724  carbamoyl phosphate synthase small subunit  55.06 
 
 		 378 aa  390  1e-107  Pseudomonas putida KT2440  Bacteria  normal  0.103863  hitchhiker  0.00276318 
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  54.32 
 
 		 385 aa  391  1e-107  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal  1 
 
 
-
 
NC_009439  Pmen_3621  carbamoyl phosphate synthase small subunit  52.97 
 
 		 382 aa  391  1e-107  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_4725  carbamoyl phosphate synthase small subunit  55.06 
 
 		 378 aa  389  1e-107  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  51.19 
 
 		 383 aa  389  1e-107  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_2195  carbamoyl phosphate synthase small subunit  52.79 
 
 		 382 aa  389  1e-107  Cupriavidus metallidurans CH34  Bacteria  normal  0.0764461  normal  0.137113 
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  54.72 
 
 		 384 aa  389  1e-107  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  51.45 
 
 		 381 aa  388  1e-107  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_008782  Ajs_2392  carbamoyl-phosphate synthase small subunit  51.97 
 
 		 390 aa  390  1e-107  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_4590  carbamoyl phosphate synthase small subunit  55.06 
 
 		 386 aa  389  1e-107  Pseudomonas putida F1  Bacteria  normal  1  normal  0.740896 
 
 
-
 
NC_012560  Avin_42940  carbamoyl phosphate synthase small subunit  52.89 
 
 		 378 aa  388  1e-107  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_1456  carbamoyl-phosphate synthase, small subunit  51.97 
 
 		 390 aa  390  1e-107  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  49.21 
 
 		 384 aa  386  1e-106  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_002977  MCA1853  carbamoyl phosphate synthase small subunit  53.58 
 
 		 378 aa  386  1e-106  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0936768  n/a   
 
 
-
 
NC_004578  PSPTO_4502  carbamoyl-phosphate synthase, small subunit  55.09 
 
 		 378 aa  385  1e-106  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.723109  n/a   
 
 
-
 
NC_007005  Psyr_4192  carbamoyl phosphate synthase small subunit  55.61 
 
 		 378 aa  386  1e-106  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A2177  carbamoyl phosphate synthase small subunit  53.19 
 
 		 378 aa  385  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_0766  carbamoyl phosphate synthase small subunit  55.12 
 
 		 386 aa  386  1e-106  Pseudomonas fluorescens Pf0-1  Bacteria  decreased coverage  0.00373051  normal  0.380766 
 
 
-
 
NC_010501  PputW619_0708  carbamoyl phosphate synthase small subunit  55.32 
 
 		 386 aa  386  1e-106  Pseudomonas putida W619  Bacteria  normal  0.44923  normal  0.0111499 
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  51.45 
 
 		 393 aa  387  1e-106  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.0283036 
 
 
-
 
NC_008463  PA14_62930  carbamoyl phosphate synthase small subunit  53.75 
 
 		 378 aa  387  1e-106  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1261  carbamoyl-phosphate synthase small subunit  52.59 
 
 		 383 aa  382  1e-105  Methylibium petroleiphilum PM1  Bacteria  normal  1  decreased coverage  0.00672288 
 
 
-
 
NC_008786  Veis_1148  carbamoyl-phosphate synthase, small subunit  52.13 
 
 		 387 aa  382  1e-105  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0863472  normal  1 
 
 
-
 
NC_009656  PSPA7_5478  carbamoyl phosphate synthase small subunit  53.26 
 
 		 378 aa  384  1e-105  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010084  Bmul_2030  carbamoyl phosphate synthase small subunit  52.94 
 
 		 380 aa  381  1e-105  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.115427  normal  1 
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  52.97 
 
 		 397 aa  383  1e-105  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  52.39 
 
 		 387 aa  383  1e-105  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal  1 
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  50.79 
 
 		 401 aa  384  1e-105  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_4932  carbamoyl-phosphate synthase, small subunit  51.31 
 
 		 388 aa  384  1e-105  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.259128 
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  52 
 
 		 393 aa  382  1e-105  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.0542874 
 
 
-
 
NC_013422  Hneap_1563  carbamoyl-phosphate synthase, small subunit  54.05 
 
 		 377 aa  384  1e-105  Halothiobacillus neapolitanus c2  Bacteria  normal  0.878317  n/a   
 
 
-
 
NC_007404  Tbd_1127  carbamoyl-phosphate synthase small subunit  55.2 
 
 		 379 aa  381  1e-104  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.390679  normal  1 
 
 
-
 
NC_009801  EcE24377A_0033  carbamoyl phosphate synthase small subunit  51.05 
 
 		 382 aa  380  1e-104  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0778  carbamoyl-phosphate synthase small subunit  52.41 
 
 		 376 aa  381  1e-104  Methylobacillus flagellatus KT  Bacteria  normal  0.42563  hitchhiker  0.000147727 
 
 
-
 
NC_010468  EcolC_3623  carbamoyl phosphate synthase small subunit  50.79 
 
 		 382 aa  379  1e-104  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.314254 
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  50 
 
 		 382 aa  380  1e-104  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
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