More than 300 homologs were found in PanDaTox collection
for query gene Saro_3718 on replicon NC_009427
Organism: Novosphingobium aromaticivorans DSM 12444



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009427  Saro_3718  short-chain dehydrogenase/reductase SDR  100 
 
 
263 aa  524  1e-148  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0445415  n/a   
 
 
-
 
NC_007347  Reut_A1577  Short-chain dehydrogenase/reductase SDR  56.97 
 
 
265 aa  258  6e-68  Ralstonia eutropha JMP134  Bacteria  normal  0.458261  n/a   
 
 
-
 
NC_007794  Saro_3083  short-chain dehydrogenase/reductase SDR  54.9 
 
 
259 aa  248  6e-65  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1182  short-chain dehydrogenase/reductase SDR  46 
 
 
248 aa  201  7e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_4926  short-chain dehydrogenase/reductase SDR  36.48 
 
 
250 aa  135  8e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0706  short-chain dehydrogenase/reductase SDR  36.55 
 
 
287 aa  131  1.0000000000000001e-29  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1520  short-chain dehydrogenase/reductase SDR  36.82 
 
 
287 aa  130  3e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007348  Reut_B4775  NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR  35.8 
 
 
249 aa  130  3e-29  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0655  short chain dehydrogenase  32.21 
 
 
288 aa  127  2.0000000000000002e-28  Bacillus cereus E33L  Bacteria  hitchhiker  0.000332724  n/a   
 
 
-
 
NC_010552  BamMC406_4933  short-chain dehydrogenase/reductase SDR  37.25 
 
 
249 aa  127  2.0000000000000002e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  0.504822  normal 
 
 
-
 
NC_011729  PCC7424_0495  short-chain dehydrogenase/reductase SDR  34.68 
 
 
240 aa  126  3e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_012880  Dd703_0990  acetoin reductase  33.73 
 
 
257 aa  126  5e-28  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1200  short-chain dehydrogenase/reductase SDR  36.44 
 
 
287 aa  126  5e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0712  short chain dehydrogenase  31.84 
 
 
288 aa  125  8.000000000000001e-28  Bacillus anthracis str. Sterne  Bacteria  normal  0.712851  n/a   
 
 
-
 
NC_005957  BT9727_0663  short chain dehydrogenase  31.84 
 
 
288 aa  125  8.000000000000001e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0748  short chain dehydrogenase  31.84 
 
 
288 aa  125  8.000000000000001e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0824  short chain dehydrogenase  31.84 
 
 
288 aa  125  8.000000000000001e-28  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.87827e-53 
 
 
-
 
NC_013501  Rmar_2450  3-oxoacyl-(acyl-carrier-protein) reductase  34.85 
 
 
249 aa  125  9e-28  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0818  short chain dehydrogenase  31.84 
 
 
288 aa  124  1e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0303  acetoin reductase  34.14 
 
 
257 aa  124  2e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  0.506804  n/a   
 
 
-
 
NC_011729  PCC7424_1059  short-chain dehydrogenase/reductase SDR  33.33 
 
 
284 aa  124  2e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.102631 
 
 
-
 
NC_010681  Bphyt_3408  short-chain dehydrogenase/reductase SDR  35.27 
 
 
266 aa  124  2e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0359384  normal  0.0764099 
 
 
-
 
NC_008541  Arth_0841  short-chain dehydrogenase/reductase SDR  35.37 
 
 
257 aa  124  2e-27  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2434  short-chain dehydrogenase/reductase SDR  33.33 
 
 
252 aa  124  2e-27  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.000391653  normal  0.106705 
 
 
-
 
NC_003910  CPS_1680  short chain dehydrogenase/reductase family oxidoreductase  34.94 
 
 
251 aa  123  3e-27  Colwellia psychrerythraea 34H  Bacteria  normal  0.447885  n/a   
 
 
-
 
NC_011368  Rleg2_5146  short chain dehydrogenase  34.94 
 
 
249 aa  123  3e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.485132 
 
 
-
 
NC_008391  Bamb_4414  short-chain dehydrogenase/reductase SDR  37.25 
 
 
249 aa  123  3e-27  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0262262 
 
 
-
 
NC_012793  GWCH70_1182  3-ketoacyl-(acyl-carrier-protein) reductase  35.42 
 
 
238 aa  123  3e-27  Geobacillus sp. WCH70  Bacteria  normal  0.049347  n/a   
 
 
-
 
NC_009512  Pput_1853  short chain dehydrogenase  33.06 
 
 
248 aa  122  4e-27  Pseudomonas putida F1  Bacteria  normal  normal  0.0255739 
 
 
-
 
NC_007413  Ava_2428  Short-chain dehydrogenase/reductase SDR  32.35 
 
 
285 aa  122  5e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  hitchhiker  0.00441007 
 
 
-
 
NC_012850  Rleg_4625  short chain dehydrogenase  34.69 
 
 
249 aa  122  5e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.402352  normal  0.18483 
 
 
-
 
NC_007509  Bcep18194_C7178  short chain dehydrogenase  35.66 
 
 
262 aa  122  6e-27  Burkholderia sp. 383  Bacteria  normal  normal  0.0959368 
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  34.15 
 
 
258 aa  122  7e-27  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_007348  Reut_B4376  Short-chain dehydrogenase/reductase SDR  36.13 
 
 
285 aa  122  9e-27  Ralstonia eutropha JMP134  Bacteria  normal  0.896027  n/a   
 
 
-
 
NC_010622  Bphy_2612  short-chain dehydrogenase/reductase SDR  34.44 
 
 
266 aa  121  9.999999999999999e-27  Burkholderia phymatum STM815  Bacteria  normal  normal  0.227086 
 
 
-
 
NC_011658  BCAH187_A0912  short chain dehydrogenase  31.46 
 
 
288 aa  121  9.999999999999999e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4525  short chain dehydrogenase  32.51 
 
 
288 aa  121  9.999999999999999e-27  Bacillus cereus G9842  Bacteria  normal  normal  0.193288 
 
 
-
 
CP001800  Ssol_0856  short-chain dehydrogenase/reductase SDR  32.92 
 
 
252 aa  120  1.9999999999999998e-26  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009953  Sare_3002  short-chain dehydrogenase/reductase SDR  33.73 
 
 
266 aa  120  1.9999999999999998e-26  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.00000526062 
 
 
-
 
NC_007514  Cag_1662  3-oxoacyl-(acyl-carrier-protein) reductase  32.64 
 
 
245 aa  120  1.9999999999999998e-26  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0549  putative short-chain dehydrogenase/reductase, FabG-like  33.07 
 
 
266 aa  120  1.9999999999999998e-26  Burkholderia xenovorans LB400  Bacteria  normal  0.204322  normal  0.437639 
 
 
-
 
NC_010557  BamMC406_6012  short chain dehydrogenase  34.02 
 
 
262 aa  120  1.9999999999999998e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.998031 
 
 
-
 
NC_008825  Mpe_A2921  dehydrogenase  35.66 
 
 
261 aa  120  1.9999999999999998e-26  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.932836 
 
 
-
 
NC_013739  Cwoe_4407  short-chain dehydrogenase/reductase SDR  35.63 
 
 
268 aa  120  3e-26  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0296  acetoin reductase  34.54 
 
 
257 aa  120  3e-26  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.863325  n/a   
 
 
-
 
NC_008392  Bamb_6308  short chain dehydrogenase  33.61 
 
 
262 aa  120  3e-26  Burkholderia ambifaria AMMD  Bacteria  normal  0.435974  normal  0.367823 
 
 
-
 
NC_014210  Ndas_1378  short-chain dehydrogenase/reductase SDR  37.55 
 
 
251 aa  119  3.9999999999999996e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.179495  normal  0.922727 
 
 
-
 
NC_010511  M446_2746  short-chain dehydrogenase/reductase SDR  35.39 
 
 
249 aa  119  3.9999999999999996e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.458004  normal  0.197887 
 
 
-
 
NC_008752  Aave_1089  short-chain dehydrogenase/reductase SDR  36.14 
 
 
259 aa  119  3.9999999999999996e-26  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_008781  Pnap_2307  3-oxoacyl-(acyl-carrier-protein) reductase  34.6 
 
 
247 aa  119  3.9999999999999996e-26  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_0167  3-oxoacyl-(acyl-carrier-protein) reductase  32.24 
 
 
245 aa  119  3.9999999999999996e-26  Chlorobium limicola DSM 245  Bacteria  normal  0.619009  n/a   
 
 
-
 
NC_008062  Bcen_5486  short chain dehydrogenase  35.25 
 
 
262 aa  119  6e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.398056  n/a   
 
 
-
 
NC_008544  Bcen2424_6772  short chain dehydrogenase  35.25 
 
 
262 aa  119  6e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.646299 
 
 
-
 
NC_014148  Plim_0297  short-chain dehydrogenase/reductase SDR  35.2 
 
 
251 aa  118  7.999999999999999e-26  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.677514  n/a   
 
 
-
 
NC_008390  Bamb_0525  short-chain dehydrogenase/reductase SDR  34.16 
 
 
271 aa  118  7.999999999999999e-26  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0805  short chain dehydrogenase  32.51 
 
 
288 aa  118  7.999999999999999e-26  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B3095  3-oxoacyl-[acyl-carrier-protein] reductase  32.07 
 
 
246 aa  118  9e-26  Burkholderia sp. 383  Bacteria  normal  normal  0.025547 
 
 
-
 
NC_009674  Bcer98_0632  short chain dehydrogenase  30.71 
 
 
288 aa  118  9e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.000000680928  n/a   
 
 
-
 
NC_011830  Dhaf_3817  3-oxoacyl-(acyl-carrier-protein) reductase  32.92 
 
 
247 aa  118  9e-26  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.00000000000000217117  n/a   
 
 
-
 
NC_006348  BMA2483  short chain dehydrogenase/reductase family oxidoreductase  34.02 
 
 
268 aa  117  9.999999999999999e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  0.709099  n/a   
 
 
-
 
NC_007434  BURPS1710b_3480  short chain dehydrogenase/reductase family oxidoreductase  34.02 
 
 
268 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  0.538943  n/a   
 
 
-
 
NC_009080  BMA10247_3302  short chain dehydrogenase/reductase family oxidoreductase  34.02 
 
 
268 aa  117  9.999999999999999e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0509  3-oxoacyl-(acyl-carrier-protein) reductase  29.88 
 
 
245 aa  118  9.999999999999999e-26  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3445  NAD dependent epimerase/dehydratase family protein  34.02 
 
 
268 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1454  short-chain dehydrogenase/reductase SDR  34.3 
 
 
249 aa  117  9.999999999999999e-26  Polaromonas sp. JS666  Bacteria  normal  0.77933  normal  0.490701 
 
 
-
 
NC_009487  SaurJH9_0113  acetoin reductase  33.86 
 
 
258 aa  117  9.999999999999999e-26  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_2288  short-chain dehydrogenase/reductase SDR  33.88 
 
 
306 aa  118  9.999999999999999e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_3483  NAD dependent epimerase/dehydratase family protein  34.02 
 
 
271 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0117  acetoin reductase  33.86 
 
 
258 aa  117  9.999999999999999e-26  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0403  short chain dehydrogenase/reductase family oxidoreductase  34.02 
 
 
268 aa  117  9.999999999999999e-26  Burkholderia mallei SAVP1  Bacteria  normal  0.253369  n/a   
 
 
-
 
NC_008836  BMA10229_A1263  short chain dehydrogenase/reductase family oxidoreductase  34.02 
 
 
268 aa  117  9.999999999999999e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2499  short chain dehydrogenase  34.39 
 
 
272 aa  117  1.9999999999999998e-25  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.496805  n/a   
 
 
-
 
NC_009511  Swit_0897  short-chain dehydrogenase/reductase SDR  34.39 
 
 
275 aa  117  1.9999999999999998e-25  Sphingomonas wittichii RW1  Bacteria  normal  0.216969  normal  0.388897 
 
 
-
 
NC_008254  Meso_3434  short-chain dehydrogenase/reductase SDR  36.9 
 
 
263 aa  117  1.9999999999999998e-25  Chelativorans sp. BNC1  Bacteria  normal  0.101369  n/a   
 
 
-
 
NC_008391  Bamb_3531  short chain dehydrogenase  34.01 
 
 
250 aa  117  1.9999999999999998e-25  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009632  SaurJH1_2549  short chain dehydrogenase  34.39 
 
 
272 aa  117  1.9999999999999998e-25  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0974  acetoin reductase  33.73 
 
 
257 aa  116  3e-25  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1182  short chain dehydrogenase/reductase family oxidoreductase  35.25 
 
 
271 aa  116  3e-25  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_4047  3-oxoacyl-(acyl-carrier-protein) reductase  33.87 
 
 
249 aa  116  3e-25  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6360  short chain dehydrogenase  34.84 
 
 
262 aa  117  3e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2516  short-chain dehydrogenase/reductase SDR  34.84 
 
 
256 aa  116  3e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010581  Bind_2338  short-chain dehydrogenase/reductase SDR  31.06 
 
 
263 aa  116  3e-25  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.288132 
 
 
-
 
NC_009767  Rcas_0104  short-chain dehydrogenase/reductase SDR  32.49 
 
 
246 aa  116  3e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.650868  normal 
 
 
-
 
NC_008261  CPF_2925  short chain dehydrogenase/reductase family oxidoreductase  30.58 
 
 
296 aa  116  3e-25  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4381  short-chain dehydrogenase/reductase SDR  35.39 
 
 
254 aa  116  3e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2028  acetoin reductase  32.93 
 
 
256 aa  116  3.9999999999999997e-25  Enterobacter sp. 638  Bacteria  normal  normal  0.24531 
 
 
-
 
NC_009621  Smed_5843  short-chain dehydrogenase/reductase SDR  32 
 
 
261 aa  116  3.9999999999999997e-25  Sinorhizobium medicae WSM419  Bacteria  normal  0.861263  normal 
 
 
-
 
NC_007512  Plut_0131  3-oxoacyl-(acyl-carrier-protein) reductase  33.47 
 
 
245 aa  116  3.9999999999999997e-25  Chlorobium luteolum DSM 273  Bacteria  normal  0.120855  normal 
 
 
-
 
NC_010184  BcerKBAB4_0667  short chain dehydrogenase  29.96 
 
 
288 aa  116  3.9999999999999997e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.401827  n/a   
 
 
-
 
NC_010524  Lcho_3979  short-chain dehydrogenase/reductase SDR  34.18 
 
 
246 aa  116  3.9999999999999997e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00235885 
 
 
-
 
NC_009523  RoseRS_4552  short-chain dehydrogenase/reductase SDR  32.23 
 
 
246 aa  116  3.9999999999999997e-25  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1486  short-chain dehydrogenase/reductase SDR  32.79 
 
 
241 aa  116  3.9999999999999997e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.727774  normal 
 
 
-
 
NC_013170  Ccur_11130  3-oxoacyl-(acyl-carrier-protein) reductase  33.61 
 
 
255 aa  115  5e-25  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1849  short chain dehydrogenase  35.22 
 
 
255 aa  115  5e-25  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.838313 
 
 
-
 
NC_009901  Spea_2148  short-chain dehydrogenase/reductase SDR  31.09 
 
 
247 aa  115  6e-25  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1440  short chain dehydrogenase  34.3 
 
 
250 aa  115  6e-25  Pectobacterium wasabiae WPP163  Bacteria  normal  0.637118  n/a   
 
 
-
 
NC_008639  Cpha266_2492  3-oxoacyl-[acyl-carrier-protein] reductase  31.82 
 
 
245 aa  115  6e-25  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2799  3-oxoacyl-(acyl-carrier-protein) reductase  32.77 
 
 
246 aa  115  6e-25  Salinispora tropica CNB-440  Bacteria  normal  0.786413  normal 
 
 
-
 
NC_010676  Bphyt_6140  short-chain dehydrogenase/reductase SDR  32.82 
 
 
254 aa  115  6.9999999999999995e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  0.601598  normal 
 
 
-
 
NC_010551  BamMC406_0549  short-chain dehydrogenase/reductase SDR  34.16 
 
 
270 aa  115  6.9999999999999995e-25  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.00753595  normal  0.67708 
 
 
-
 
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