Gene Ssol_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0856 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp798348 
End bp799106 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content40% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionACX91104 
Protein GI261601501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAT TCTGTGATTT AAGCGGGAGA ATAGCCATTG TAACTGGAGG TGCTAGTGGA 
ATAGGAAGGG CCATAGCGTT CAAATTAGCG AGTCTGGGAG CTACCGTAGT TTTAGGCGAT
GTGAAATTAG AGGAACTTAA AAACGTCGTG AATGAAATCA CCCAACAGAC AAGTTCTAAA
GTCCTTCCCC TTTATGTAAA TGTGGGGGAT TTCAATTCAG CTAAGGAGTT CTATCAAAAA
GCTACTGAGA TCCTAGGAAT AGATTACGTA GATATTTTAG TAAACAATGC GGGGATAAAT
AGGGACGCCT TATTTGTTAA GATGACTTTT GAACAGTGGG ATGAGGTAAT GAAAGTCGAC
CTATATAGTA TGTTCAATAT GACTAAACAA GTTGTTGATG GAATGATAAG AAGAAACTAC
GGAAGAATAA TAAATATGTC GTCAATGAGT TGGTTGGGGA ATATTGGACA AGCTAATTAT
TCAGCAGCTA AGGCTGGGGT TATAGGCTTC ACGAAAACTC TAGCAAGGGA ATTGGCTAAA
TATAACATCA CCGTAAACGC CATAACTCCA GGTTTCATTG ATACTCCAAT GACGAGGGCA
GTTCCAGAGA AGGTTAGACA AAAAATTATA GAGAGAATAC CAATGGGTAG AGTTGGTAGT
CCAGAAGAGG TAGCTAATCT AATAGCTTTC CTATCCTCTG AAGAAGCATC CTACATAACG
GGAGAGGTAA TAGGAGTTAC CGGGGGTTTG GTGTTGTGA
 
Protein sequence
MRKFCDLSGR IAIVTGGASG IGRAIAFKLA SLGATVVLGD VKLEELKNVV NEITQQTSSK 
VLPLYVNVGD FNSAKEFYQK ATEILGIDYV DILVNNAGIN RDALFVKMTF EQWDEVMKVD
LYSMFNMTKQ VVDGMIRRNY GRIINMSSMS WLGNIGQANY SAAKAGVIGF TKTLARELAK
YNITVNAITP GFIDTPMTRA VPEKVRQKII ERIPMGRVGS PEEVANLIAF LSSEEASYIT
GEVIGVTGGL VL