| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0296 |
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| Symbol | |
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| ID | 8131209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 341202 |
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| End bp | 341975 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863576 |
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| Product | acetoin reductase |
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| Protein accession | YP_003015891 |
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| Protein GI | 253686701 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR02415] acetoin reductases |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.863325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGTCG AAGTGGCCCT TGTAACAGGT GCTGGTCAAG GTATTGGCCG TGCTATTGCT
CTCAGACTGG CGGCAGACGG TTTTGCCGTC GCCATCGTGG ACTACAATCA GGAAACCGCG
CACAGCGTGG CGCAAGAAAT CGAAAAAGCT GGCGGACAGG CTATCGCATT ACAGGCAGAC
GTCGCGGATC GTGAGGCCGT TTTCGCAGCC GTTGCCGCAG CTAAAAAGCG CTTTGGTGAC
TTTAACGTCA TCGTCAATAA CGCTGGCGTT GCCCCTTCAA CGCTGATTGA AGACATCACG
CCGGAAGTCA TCGATCGCGT TTATAACATC AACGTCAAAG GCGTTATCTG GGGGATTCAG
GCTGCGCTCG ACGCCTTTAA ATCCCTGGGT CACGGCGGAA AAATCATCAA CGCCTGTTCG
CAGGCCGGAC ATGTGGGCAA CCCTGAACTC GCCGTCTACA GCTCAAGTAA ATTTGCGGTT
CGTGGCCTGA CGCAAACTGC CGCACGCGAT TTAGCGCCGT TAGGCATCAC AGTCAACGGT
TACTGCCCGG GTATCGTAAA AACGCCAATG TGGGATGAAA TCGATCGGAA AATCTCCGAA
TCCGCAGGGA AACCGCGTGG CTATGCGACA GAAGAATTCG CCAAACGTAT TACGCTGGGT
CGCCTTTCTG AACCAGAAGA TGTCGCTGCC TGCGTATCCT ATTTGGCCAG CCACGATTCT
GACTATATGA CGGGGCAATC GCTATTGATT GATGGCGGAA TGGTATTCAA TTAA
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| Protein sequence | MAVEVALVTG AGQGIGRAIA LRLAADGFAV AIVDYNQETA HSVAQEIEKA GGQAIALQAD
VADREAVFAA VAAAKKRFGD FNVIVNNAGV APSTLIEDIT PEVIDRVYNI NVKGVIWGIQ
AALDAFKSLG HGGKIINACS QAGHVGNPEL AVYSSSKFAV RGLTQTAARD LAPLGITVNG
YCPGIVKTPM WDEIDRKISE SAGKPRGYAT EEFAKRITLG RLSEPEDVAA CVSYLASHDS
DYMTGQSLLI DGGMVFN
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