Gene Ndas_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1378 
Symbol 
ID9245228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1693993 
End bp1694748 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content75% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003679316 
Protein GI297560342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.179495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.922727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACA CCAGGCACCG CGGAGTCACC GCCGTGGTCA CCGGCGCGGC CCGCGGCATC 
GGGGAGGCCA CCGCCCGCCG CCTGGCCGCC GAGGGCGCCT CGGTGGTGCT GACCGACCTG
TCCCCGAGCC TGGAGGAGAC CGCCGAACGC ATCCGCGCCG AGGGCGGGCG CGCCCTGGCG
GTGCGTGCCG ACGTGAGCGA CGAGGCCTCC TGGGACGGGG TCGTGGCGGC GGCCCGGGAC
GCCTTCGGGC CGGTGGGCGT CCTGGTCTCC AACGCCTACA CCTTCGAGCA GGCGCCCGCC
CACGAGACCA CACTCGTGTC CTGGGAGCGC CAGCTCGCCG TCAACCTCAC GGGCGCGTTC
CTGGGGGTGC GCGCCTGCCT GGACGACCTC TCCGCCAGCG GCGGCAGCGT CGTCATCACC
TCCTCGGTCC ACGCCTGGTT CGGGCTCCCC GGCCGACCGG CCTACGCCAC CACCAAGGGC
GGGCTCACCG CCCTGACCCG CCAGCTCGCC GTCGAGTACG GGCCGCGGGT GCGCGTCAAC
TGCGTGCTGC CCGGCCCCAT CCTCACCGCC GCCTGGGAGG GCGTGGGCGA GGAGGACCGC
CGCGACAGCG TCGCGCAGAC CGCCGCGGGC CGCTTCGGCG ACCCCGACGA GGTGGCCTCC
GTCATCTCCT TCCTCGCCTC CGCGGAGGCC TCCTACGTCA CCGGGACGAG CCTGCCGGTC
GACGGAGGGT GGAGTATCTA CAAGGCGTCG TCGTGA
 
Protein sequence
MTHTRHRGVT AVVTGAARGI GEATARRLAA EGASVVLTDL SPSLEETAER IRAEGGRALA 
VRADVSDEAS WDGVVAAARD AFGPVGVLVS NAYTFEQAPA HETTLVSWER QLAVNLTGAF
LGVRACLDDL SASGGSVVIT SSVHAWFGLP GRPAYATTKG GLTALTRQLA VEYGPRVRVN
CVLPGPILTA AWEGVGEEDR RDSVAQTAAG RFGDPDEVAS VISFLASAEA SYVTGTSLPV
DGGWSIYKAS S