Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1378 |
Symbol | |
ID | 9245228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1693993 |
End bp | 1694748 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003679316 |
Protein GI | 297560342 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.179495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.922727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACACA CCAGGCACCG CGGAGTCACC GCCGTGGTCA CCGGCGCGGC CCGCGGCATC GGGGAGGCCA CCGCCCGCCG CCTGGCCGCC GAGGGCGCCT CGGTGGTGCT GACCGACCTG TCCCCGAGCC TGGAGGAGAC CGCCGAACGC ATCCGCGCCG AGGGCGGGCG CGCCCTGGCG GTGCGTGCCG ACGTGAGCGA CGAGGCCTCC TGGGACGGGG TCGTGGCGGC GGCCCGGGAC GCCTTCGGGC CGGTGGGCGT CCTGGTCTCC AACGCCTACA CCTTCGAGCA GGCGCCCGCC CACGAGACCA CACTCGTGTC CTGGGAGCGC CAGCTCGCCG TCAACCTCAC GGGCGCGTTC CTGGGGGTGC GCGCCTGCCT GGACGACCTC TCCGCCAGCG GCGGCAGCGT CGTCATCACC TCCTCGGTCC ACGCCTGGTT CGGGCTCCCC GGCCGACCGG CCTACGCCAC CACCAAGGGC GGGCTCACCG CCCTGACCCG CCAGCTCGCC GTCGAGTACG GGCCGCGGGT GCGCGTCAAC TGCGTGCTGC CCGGCCCCAT CCTCACCGCC GCCTGGGAGG GCGTGGGCGA GGAGGACCGC CGCGACAGCG TCGCGCAGAC CGCCGCGGGC CGCTTCGGCG ACCCCGACGA GGTGGCCTCC GTCATCTCCT TCCTCGCCTC CGCGGAGGCC TCCTACGTCA CCGGGACGAG CCTGCCGGTC GACGGAGGGT GGAGTATCTA CAAGGCGTCG TCGTGA
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Protein sequence | MTHTRHRGVT AVVTGAARGI GEATARRLAA EGASVVLTDL SPSLEETAER IRAEGGRALA VRADVSDEAS WDGVVAAARD AFGPVGVLVS NAYTFEQAPA HETTLVSWER QLAVNLTGAF LGVRACLDDL SASGGSVVIT SSVHAWFGLP GRPAYATTKG GLTALTRQLA VEYGPRVRVN CVLPGPILTA AWEGVGEEDR RDSVAQTAAG RFGDPDEVAS VISFLASAEA SYVTGTSLPV DGGWSIYKAS S
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