| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6308 |
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| Symbol | |
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| ID | 4315212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 905326 |
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| End bp | 906114 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638154152 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_778186 |
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| Protein GI | 115361049 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.435974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.367823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCC TTGCTGGCAA AGTCGCGCTC GTCACCGGCG GCGCCACGCT GATCGGCGCC
GCCGTCGCGC AGGACCTGAG CCGCGCCGGC GCATGCGTCG CGATCCTCGA TCTCGATGCG
GAAAACGGTG CGCGCGTGGC CGATGCGCTC GGCGAACGCG GGATGTTCAT CGCGACCGAC
ATCACCGACG ACCGCGCGAT CGAACACGCG GTATCGGCCG TCGCCGAACG CTTCGGCGCG
ATCGACCTGC TGATCAACCT CGCCTGCAGC TACGTCGACA ACGGCATCCA GGCGTCGCGC
CGCGACTGGC TCGCGGCGAT GGACGTCAAC GTCGTGTCGG CCGCGATGCT GGTCAAGGCC
GTTCATCCGC ACCTGGTGCG GCGCGGCGGC GGCGCGATCG TGAACTTCAG TTCGATCTCC
GCGCAATGCG CGCAGACCGG CCGCTGGCTC TACCCGACCT CGAAGGCCGC GATACGCCAG
CTCACGCGCA GCATGGCGAT GGATCTCTCC GCCGACCGGA TACGTGTCAA CTCGGTGTCG
CCCGGCTGGA CGTGGTCGCG CGTGATGGAC GAGCTGACGC ACGGCGACCG CGCGAAGACC
GATCGCGTGG CCGCGCCGTT TCATCTGCTC GGTCGTGTCG GCGATCCGTC GGAAGTCGCG
CAGGTCGTCA CGTTCCTGTG CAGCGACGCC GCGAGCTTCG TGACGGGCGC CGACTACGCG
GTGGACGGCG GCTATTCCGC GATGGGCCCT GAGCAGGCGG TGCCGGCGAT TCCGCGCCTC
GCGGAGTAA
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| Protein sequence | MTALAGKVAL VTGGATLIGA AVAQDLSRAG ACVAILDLDA ENGARVADAL GERGMFIATD
ITDDRAIEHA VSAVAERFGA IDLLINLACS YVDNGIQASR RDWLAAMDVN VVSAAMLVKA
VHPHLVRRGG GAIVNFSSIS AQCAQTGRWL YPTSKAAIRQ LTRSMAMDLS ADRIRVNSVS
PGWTWSRVMD ELTHGDRAKT DRVAAPFHLL GRVGDPSEVA QVVTFLCSDA ASFVTGADYA
VDGGYSAMGP EQAVPAIPRL AE
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