| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1853 |
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| Symbol | |
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| ID | 5190789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2126622 |
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| End bp | 2127368 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640586320 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001267188 |
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| Protein GI | 148547086 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0255739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGAT TGCAAGGCAA ACGCGCACTG ATCACCGGTG GCACCAGCGG AATTGGTCTC
GAAGCCGCTA AGCATTTTCT GAATGAGGGG GCCAGAGTTG TCGTTACAGG CGTGAACCCA
GATTCAATCG CTAAAGCTAA GAATCAGCTA GGGAGCGAGG TACTTGTGCT CCAGGCGGAC
TCCGCTGACG TGGAAGCCCA GAAAAAACTC GCTCTCGACA TCCGTGATCA TTTTGGACAG
CTTGATATCG CTTTCCTCAA TGCTGGTGTT TCTGTATGGA TGCCTATGGA AGCGTGGACT
GAAGAGATGT TTGATCGGTC TTTTGACATC AATGTCAAAG GGCCTTACTT CCTGATCCAG
GCACTCCTGC CGGTGTTCGC AAATCCGGCT TCCGTAGTAT TGAATACTTC TGTGAGTGTT
CATGTGGGTG ATGCCAACTC TTCGGTTTAC GCGGCGACCA AAGCAGCGCT GCTGAATATG
TCGAAAACAC TTTCAACAGA GCTGCTTGAT CGCGGTGTTC GTCTGAATGC TGTGAGTCCT
GGCCCTGTGG ATACACCACT TTATGACAAG CTCGGTATTC CAGTTGAGTA CAGGGAGCAG
GTAAACGCTG AAATCGTTTC TTCCATTCCC GCAGGTCGTT TCGGCACGCC AGAAGAGATC
GCCAAAGCGG TAGTGTACCT AGCATCTGAT GAGTCCAAAT GGACGATTGG GTCTGAAATC
ATCGTGGACG GCGGACGTCG ACTGTAA
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| Protein sequence | MARLQGKRAL ITGGTSGIGL EAAKHFLNEG ARVVVTGVNP DSIAKAKNQL GSEVLVLQAD
SADVEAQKKL ALDIRDHFGQ LDIAFLNAGV SVWMPMEAWT EEMFDRSFDI NVKGPYFLIQ
ALLPVFANPA SVVLNTSVSV HVGDANSSVY AATKAALLNM SKTLSTELLD RGVRLNAVSP
GPVDTPLYDK LGIPVEYREQ VNAEIVSSIP AGRFGTPEEI AKAVVYLASD ESKWTIGSEI
IVDGGRRL
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