Gene Rleg2_5146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5146 
Symbol 
ID6978240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp784337 
End bp785086 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content61% 
IMG OID643394274 
Productshort chain dehydrogenase 
Protein accessionYP_002279092 
Protein GI209547174 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.485132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGAC TAGCCAACAA GACCGCTCTG ATCACTGGGG GCACCAGCGG CATCGGCCTT 
GAAACCGCCC GTCAGTTCGT CGCCGAAGGC GCGCGGGTCG CCGTCACTGG CAGCAGCGCA
GCCAGCGTGG AGAAGGCCCG CATCGAGCTC GGCGACAACG TCATCGTCAT TCAGTCAGAC
GCGGGCGACG TCAACGGCCA GAAGAAGGTC GTCAGCCAAA TCGAGGAGGC GTTCGGTCAC
CTCGACATCC TGTTCGTCAA CGCAGGTGTC GCTCAATTCG GACCGGTCGA AAACTGGTCG
GAGGCGGACT TTGACAAGTC GTTTGCAACG AACGTGAAGG GTCCCTACTT CCTGATCCAG
GGCCTCCTGC CACTGTTCTC GAAGGGTGCC TCCATCGTGC TGAACACGTC GATCAACGCG
CATATCGGCA TGCCGAACTC GAGCGTCTAT TCACTAACAA AGGGAGCGCT CCTGACGCTG
GCGAAGACCC TCTCGGGCGA ACTGGTTGGT CGTGGCATCC GCGTGAACGC CGTCAGCCCC
GGCCCGATCG CTACCCCGCT TTACGGAAAG CTCGGTATGT CCGAGGCGGA CATGAAGGCG
ATGGCCGACG GCGTGCAGAA GCAGATTCCG GTCGGTCGCT TCGGTGACGT GTCGGAGGTA
GCAAAGACCG TGGTCTTCTT CGCATCTGAC GAGGCGGCTT ATATCGTCGG CAGCGAGCTC
GTCATCGACG GTGGCATGAG CAACCTTTAA
 
Protein sequence
MSRLANKTAL ITGGTSGIGL ETARQFVAEG ARVAVTGSSA ASVEKARIEL GDNVIVIQSD 
AGDVNGQKKV VSQIEEAFGH LDILFVNAGV AQFGPVENWS EADFDKSFAT NVKGPYFLIQ
GLLPLFSKGA SIVLNTSINA HIGMPNSSVY SLTKGALLTL AKTLSGELVG RGIRVNAVSP
GPIATPLYGK LGMSEADMKA MADGVQKQIP VGRFGDVSEV AKTVVFFASD EAAYIVGSEL
VIDGGMSNL