More than 300 homologs were found in PanDaTox collection
for query gene Ping_1251 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008709  Ping_1251  CheY-like chemotaxis protein, response regulator receiver  100 
 
 
130 aa  265  1e-70  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0858286 
 
 
-
 
NC_008709  Ping_1747  response regulator receiver protein  89.23 
 
 
130 aa  238  1e-62  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0751  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
490 aa  72.8  0.000000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.664159  normal 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
470 aa  69.7  0.00000000001  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_002936  DET1294  DNA-binding response regulator  29.6 
 
 
180 aa  68.9  0.00000000002  Dehalococcoides ethenogenes 195  Bacteria  unclonable  0.00000125664  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  32.14 
 
 
470 aa  68.2  0.00000000004  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_013739  Cwoe_4508  two component transcriptional regulator, winged helix family  32.46 
 
 
231 aa  67.8  0.00000000005  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_0639  two component, sigma54 specific, Fis family transcriptional regulator  35.09 
 
 
455 aa  67.8  0.00000000005  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3647  two component, sigma-54 specific, Fis family transcriptional regulator  33.63 
 
 
471 aa  67  0.00000000009  Geobacter uraniireducens Rf4  Bacteria  normal  0.0209004  n/a   
 
 
-
 
NC_007406  Nwi_1138  Signal transduction histidine kinase  34.78 
 
 
888 aa  66.6  0.0000000001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.408537  normal 
 
 
-
 
NC_007492  Pfl01_4550  response regulator receiver domain-containing protein  32.14 
 
 
451 aa  66.6  0.0000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.01769  normal 
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  28.57 
 
 
472 aa  66.6  0.0000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_1078  DNA-binding response regulator  28.8 
 
 
180 aa  66.6  0.0000000001  Dehalococcoides sp. VS  Bacteria  unclonable  0.00000000000063084  n/a   
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  31.19 
 
 
508 aa  66.2  0.0000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3292  response regulator receiver modulated metal dependent phosphohydrolase  31.67 
 
 
502 aa  66.2  0.0000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.652795 
 
 
-
 
NC_007298  Daro_0966  type II secretion system protein E  34.29 
 
 
746 aa  65.9  0.0000000002  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.783688 
 
 
-
 
NC_007796  Mhun_2749  response regulator receiver domain-containing protein  31.82 
 
 
436 aa  65.5  0.0000000002  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_1106  response regulator receiver protein  28.8 
 
 
180 aa  65.5  0.0000000002  Dehalococcoides sp. BAV1  Bacteria  normal  0.0674112  n/a   
 
 
-
 
NC_012918  GM21_3098  two component, sigma54 specific, transcriptional regulator, Fis family  31.73 
 
 
491 aa  65.9  0.0000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  43.59 
 
 
457 aa  65.1  0.0000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1398  multi-sensor hybrid histidine kinase  33.04 
 
 
853 aa  64.7  0.0000000004  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1649  two component, sigma54 specific, Fis family transcriptional regulator  32.38 
 
 
479 aa  64.3  0.0000000005  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  36.79 
 
 
457 aa  64.3  0.0000000005  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3003  two component Fis family transcriptional regulator  35.78 
 
 
465 aa  64.3  0.0000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0697126  n/a   
 
 
-
 
NC_008554  Sfum_2292  two component, sigma54 specific, Fis family transcriptional regulator  32.17 
 
 
462 aa  63.9  0.0000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  34.62 
 
 
461 aa  63.9  0.0000000007  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_007298  Daro_3108  LuxR response regulator receiver  29.84 
 
 
202 aa  63.5  0.0000000008  Dechloromonas aromatica RCB  Bacteria  normal  0.786061  normal 
 
 
-
 
NC_009512  Pput_2745  response regulator receiver protein  30.89 
 
 
456 aa  63.5  0.0000000008  Pseudomonas putida F1  Bacteria  normal  0.862781  normal 
 
 
-
 
NC_011831  Cagg_2019  GAF sensor hybrid histidine kinase  35.58 
 
 
1016 aa  63.5  0.0000000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.25506  normal 
 
 
-
 
NC_011769  DvMF_1993  two component, sigma54 specific, transcriptional regulator, Fis family  30.43 
 
 
486 aa  63.5  0.0000000009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_3939  putative two-component response regulatory protein, response regulator receiver  33.02 
 
 
138 aa  63.5  0.0000000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.497488  normal  0.598376 
 
 
-
 
NC_012918  GM21_0268  two component, sigma54 specific, transcriptional regulator, Fis family  38.75 
 
 
456 aa  63.2  0.000000001  Geobacter sp. M21  Bacteria  n/a    normal  0.0540037 
 
 
-
 
NC_003910  CPS_1939  sensory box sensor histidine kinase/response regulator  35.51 
 
 
1328 aa  63.2  0.000000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.282055  n/a   
 
 
-
 
NC_011146  Gbem_0283  two component, sigma54 specific, transcriptional regulator, Fis family  38.75 
 
 
456 aa  63.5  0.000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1343  response regulator receiver protein  30.95 
 
 
121 aa  62.8  0.000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4663  two component transcriptional regulator  29.91 
 
 
232 aa  63.2  0.000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3680  response regulator receiver domain-containing protein  30.77 
 
 
127 aa  63.2  0.000000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.383377  normal  0.047176 
 
 
-
 
NC_011145  AnaeK_0673  two component, sigma54 specific, transcriptional regulator, Fis family  32.46 
 
 
457 aa  63.2  0.000000001  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0673  two component, sigma54 specific, transcriptional regulator, Fis family  32.46 
 
 
458 aa  63.2  0.000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2942  response regulator  31.25 
 
 
456 aa  62.4  0.000000002  Pseudomonas putida KT2440  Bacteria  normal  0.714666  normal  0.271158 
 
 
-
 
NC_007333  Tfu_0257  response regulator receiver  29.31 
 
 
241 aa  62.8  0.000000002  Thermobifida fusca YX  Bacteria  normal  0.926332  n/a   
 
 
-
 
NC_009972  Haur_4259  multi-sensor hybrid histidine kinase  38.68 
 
 
804 aa  62.8  0.000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_1446  multi-sensor hybrid histidine kinase  32.17 
 
 
811 aa  62  0.000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5491  cell cycle control histidine kinase CckA  32.17 
 
 
892 aa  62  0.000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.606378  normal 
 
 
-
 
NC_011146  Gbem_0010  multi-sensor signal transduction histidine kinase  34.51 
 
 
511 aa  62.8  0.000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2194  response regulator receiver sensor signal transduction histidine kinase  30 
 
 
452 aa  62.4  0.000000002  Geobacter sp. M21  Bacteria  n/a    normal  0.514859 
 
 
-
 
NC_009507  Swit_5319  cell cycle transcriptional regulator CtrA  29.09 
 
 
233 aa  62  0.000000002  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0983847 
 
 
-
 
NC_009972  Haur_4036  two component transcriptional regulator  29.6 
 
 
248 aa  62  0.000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2813  two component transcriptional regulator  32.17 
 
 
231 aa  62  0.000000002  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00000151023  n/a   
 
 
-
 
CP001637  EcDH1_3989  two component, sigma54 specific, transcriptional regulator, Fis family  26.5 
 
 
441 aa  62  0.000000003  Escherichia coli DH1  Bacteria  normal  0.716922  n/a   
 
 
-
 
NC_011146  Gbem_2025  response regulator receiver sensor signal transduction histidine kinase  29.91 
 
 
452 aa  62  0.000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2848  nitrogen regulation protein NtrX, putative  40.51 
 
 
455 aa  61.6  0.000000003  Methylococcus capsulatus str. Bath  Bacteria  normal  0.754871  n/a   
 
 
-
 
NC_007298  Daro_0970  response regulator receiver  27.73 
 
 
438 aa  62  0.000000003  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A4238  transcriptional regulatory protein ZraR  26.5 
 
 
441 aa  62  0.000000003  Escherichia coli HS  Bacteria  normal  0.020936  n/a   
 
 
-
 
NC_010658  SbBS512_E4497  transcriptional regulatory protein ZraR  26.5 
 
 
441 aa  62  0.000000003  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000279415  n/a   
 
 
-
 
NC_010498  EcSMS35_4454  transcriptional regulatory protein ZraR  26.5 
 
 
441 aa  62  0.000000003  Escherichia coli SMS-3-5  Bacteria  normal  0.209341  hitchhiker  0.000519331 
 
 
-
 
NC_009801  EcE24377A_4549  transcriptional regulatory protein ZraR  26.5 
 
 
441 aa  62  0.000000003  Escherichia coli E24377A  Bacteria  hitchhiker  0.000369022  n/a   
 
 
-
 
NC_009972  Haur_3293  multi-sensor hybrid histidine kinase  28.3 
 
 
692 aa  61.6  0.000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0009  multi-sensor signal transduction histidine kinase  34.51 
 
 
509 aa  62  0.000000003  Geobacter sp. M21  Bacteria  n/a    normal  0.923259 
 
 
-
 
NC_008789  Hhal_1215  nitrogen metabolism transcriptional regulator, NtrC, Fis family  30.39 
 
 
471 aa  61.6  0.000000003  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03881  fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein  26.5 
 
 
441 aa  61.2  0.000000004  Escherichia coli BL21(DE3)  Bacteria  normal  0.0124745  n/a   
 
 
-
 
NC_013172  Bfae_02960  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  33.64 
 
 
229 aa  61.2  0.000000004  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  32.52 
 
 
237 aa  61.2  0.000000004  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2294  two component transcriptional regulator  31.9 
 
 
228 aa  61.2  0.000000004  Jannaschia sp. CCS1  Bacteria  normal  0.305192  normal 
 
 
-
 
NC_008531  LEUM_0585  DNA-binding response regulator  29.57 
 
 
230 aa  61.6  0.000000004  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00125793  n/a   
 
 
-
 
NC_010468  EcolC_4021  transcriptional regulatory protein ZraR  26.5 
 
 
441 aa  61.2  0.000000004  Escherichia coli ATCC 8739  Bacteria  normal  0.0128092  normal  0.0227655 
 
 
-
 
NC_012892  B21_03834  hypothetical protein  26.5 
 
 
441 aa  61.2  0.000000004  Escherichia coli BL21  Bacteria  normal  0.0118236  n/a   
 
 
-
 
NC_011353  ECH74115_5475  transcriptional regulatory protein ZraR  26.72 
 
 
441 aa  60.8  0.000000005  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0303  two component transcriptional regulator  28.7 
 
 
233 aa  60.8  0.000000005  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0684  two component, sigma54 specific, transcriptional regulator, Fis family  29.82 
 
 
469 aa  61.2  0.000000005  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000150794 
 
 
-
 
NC_009719  Plav_2576  multi-sensor hybrid histidine kinase  28.93 
 
 
840 aa  61.2  0.000000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0149194 
 
 
-
 
NC_009675  Anae109_0684  two component, sigma54 specific, Fis family transcriptional regulator  28.57 
 
 
456 aa  60.8  0.000000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1524  multi-sensor hybrid histidine kinase  30.43 
 
 
853 aa  60.8  0.000000006  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.334346 
 
 
-
 
NC_009511  Swit_0268  two component LuxR family transcriptional regulator  31.25 
 
 
203 aa  60.5  0.000000007  Sphingomonas wittichii RW1  Bacteria  normal  0.0126561  normal  0.200699 
 
 
-
 
NC_013173  Dbac_0387  response regulator receiver modulated metal dependent phosphohydrolase  29.36 
 
 
487 aa  60.5  0.000000007  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0207452  n/a   
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  32 
 
 
458 aa  60.5  0.000000007  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_009664  Krad_3620  two component transcriptional regulator, winged helix family  33.05 
 
 
239 aa  60.5  0.000000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0253056  normal  0.477246 
 
 
-
 
NC_013132  Cpin_4715  two component, sigma54 specific, transcriptional regulator, Fis family  37.84 
 
 
466 aa  60.5  0.000000008  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.112239  normal  0.0159313 
 
 
-
 
NC_009675  Anae109_1850  response regulator receiver protein  33.93 
 
 
126 aa  60.1  0.000000009  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.549411  normal 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  38.46 
 
 
456 aa  60.1  0.000000009  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3044  DMSO/TMAO-sensor hybrid histidine kinase  33.91 
 
 
813 aa  60.5  0.000000009  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0252  response regulator receiver protein  30.36 
 
 
239 aa  60.1  0.000000009  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.114255 
 
 
-
 
NC_011891  A2cp1_1183  two component, sigma54 specific, transcriptional regulator, Fis family  25.83 
 
 
481 aa  60.1  0.000000009  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1114  two component, sigma54 specific, transcriptional regulator, Fis family  25.83 
 
 
501 aa  60.1  0.000000009  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3771  Hpt sensor hybrid histidine kinase  33.91 
 
 
455 aa  60.5  0.000000009  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  28.32 
 
 
490 aa  60.1  0.00000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
NC_013223  Dret_1184  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  29.46 
 
 
738 aa  60.1  0.00000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0150  sensory box sensor histidine kinase/response regulator  31.25 
 
 
1177 aa  59.7  0.00000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1055  two component, sigma54 specific, Fis family transcriptional regulator  25.83 
 
 
481 aa  60.1  0.00000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.874499  n/a   
 
 
-
 
NC_014148  Plim_2937  sigma-54 factor interaction domain-containing protein  32.74 
 
 
524 aa  60.1  0.00000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.726194  n/a   
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  27.27 
 
 
480 aa  59.7  0.00000001  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_007760  Adeh_3471  two component, sigma54 specific, Fis family transcriptional regulator  34.62 
 
 
489 aa  60.1  0.00000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0200  two component transcriptional regulator  33.05 
 
 
243 aa  59.3  0.00000001  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1980  response regulator receiver modulated metal dependent phosphohydrolase  28.44 
 
 
449 aa  59.7  0.00000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.247955  n/a   
 
 
-
 
NC_009523  RoseRS_4619  two component transcriptional regulator  30.43 
 
 
245 aa  59.7  0.00000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0926269 
 
 
-
 
NC_007925  RPC_4054  response regulator receiver domain-containing protein  29.2 
 
 
136 aa  60.1  0.00000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3848  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  31.43 
 
 
703 aa  59.7  0.00000001  Thauera sp. MZ1T  Bacteria  normal  0.343403  n/a   
 
 
-
 
NC_009253  Dred_1510  two component, sigma54 specific, Fis family transcriptional regulator  31.48 
 
 
448 aa  60.1  0.00000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2891  response regulator receiver protein  30.84 
 
 
135 aa  59.7  0.00000001  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00486665  n/a   
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  28.7 
 
 
229 aa  58.9  0.00000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.179681 
 
 
-
 
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