| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2576 |
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| Symbol | |
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| ID | 5456935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2775763 |
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| End bp | 2778285 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878153 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001413842 |
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| Protein GI | 154253018 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0149194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGA CACCGGCCGA TTACGCCGAC ACGATCGATA ATTTGGATGA CAGCGACGAA
GCCGCCGGCG AGAGCGGCTG GGCGCTGCCC GCGCGGCGCT GGATCGTCAT CGGCGGGGTG
GCCATCGGTA TCGTGGCGAC GCTTCTCGAT GCCCTGGGCG TCCATGCGTT CGGCGTGCCT
GGCGGGCTCA CCGTTTTCGG CCTCTTCTCC ATCGCCACCG TGGTGCTTTA CGGGCTTTCC
GGCAGCAATG CCGATGCGTT GACCCGCTCG CCGCTTGCCG CGGCCGATGC GCTGACGGCG
CTTCCAGATC CCTGTTATGT GACGGACCGG CGCGGTTCGG TGCTGTTTGC AAACGAGGCC
TATCGCTCGC TGGCCGGCGA TTTCGATGCC GGGCGGCCGG CGCCGCTCGA ACGGTTGTTG
GCGGGGCAGG GCGATGCGGC GGAGGTCGTG TTCCGGCTGG CGCAGGCGGC GCGAACGGGA
TTTGCCGCCG AGGAAGAAGT GCGGCTCGGG CCGCGCGGGG GGCCACGCAT CTACCGTGTC
GTCGTCCGGC CGCTCAGCGG GCGCGCGGGT GGCGCGGTCT GGCTTTTCCG CGACCTGACG
GCGGAGCGCG AACGGGCGGA AGCGGCGGAA AACATACACA AGCGTTCGCT CGCCTATGTC
GAACATGCAC CGTTCGGCTT TTTCGCGGCG GACAGCGACG GCACCCTCAT TTTCATGAAT
GCCCGCCTCG GCGGCTGGCT CGGCATGGAA CCTCTCAGCA TCGTCCAACG GCGAATGAAG
CTCGACGAGC TTGTGCAGGG CGAGGCGCCG GCGCTGGCGG AAGGTGAGGC GGAGGAAAGC
GGACAATTGC CGCCGCTCGA TGTCGACCTG CGGGGCGCGG AAGGCCGGAT CATTCCGGTT
CGCATCATGC GGACGCGCGT CAGGGCGGAG AATGGACGGC AGGGGCGCAT TTTTGCGCTG
GTGCTGAACC GGACGACGGG CGACAAGGCC GAAGAAACAG CGCGCGATGC CGAGATGCGT
TTTGCGCGCT TCTTCAACAA TGCGCCGATC GGCATTGCAA CCGTCGATGC GGATTGCCGG
ATCGACAACG CCAACAAGTC ATTTGTTGCC TATGTCGGCG AAGGTGTGGA GCGCGGTACG
AAGCTCACCG ATCTTGTGGT GGAAGAAGAC CGTGCGGCCG TTGCGGAAAC GATCGGGCAG
GCGCTTTCGG GGCGGCTTTC GGCGGCGCCG GTGGATGTAC GCCTCGTGCG CAATGCCGAG
CGGGTGGGGC AGCTCTATGC CGCGCGCGTC GATACCGGGG CGGGCGCTTC CCTCGTTGTC
TACCTGATCG ACGCGACGGA GCAGAAGTCG CTCGAATTGC AATTCGCGCA GTCGCAGAAG
ATGCAGGCGG TGGGCCAGCT CGCGGGCGGC GTCGCACATG ACTTCAACAA CCTGCTGACG
GCGATCATCG GTTTTTGCGA CCTGCTGCTG GCGCGGCATC AGGCGGGCGA TCCTTCCTTC
GCGGATGTCG TGCAGATCAA GCAGAACGCC AATCGCGCCG CGAACCTGAC GCGGCAATTG
CTCGCCTTCT CGCGGCGGCA GACGCTCAGG CCGAAGGTTC TTTCGCTCAC CGACGCGGTG
GCGGAACTGC AGAACCTGCT GGCGCGGCTC CTCACCGAGA AAGTCGAACT CAAGATCGTG
CATGGCCGCG ATCTCGGCCT TGTGAAGGTC GACCAGAACC AGCTCGAACA GGTCATCATC
AATCTCGCCG TCAATGCGCG CGACGCGATG CCGGATGGCG GCAAGCTCAC CATCCGCACC
GCCAATGTGT CGGAGGCGGA CAGCCGCGCG CTCGATCACC CGCTGATGCC GCATGGCGAA
TATCTGCTGA TCGAAGTGGC CGATACGGGG CACGGCATCC CGAAGGAAAA TCTCGGCAAG
ATCTTCGAGC CCTTCTACAC GACGAAAGAT CCTTCCAAGG GCACGGGGCT CGGCCTGTCG
ACGGTCTATG GCATCGTGAA GCAGACCGGC GGCTTCATCT TCCCCTATTC GACGATCGGC
AAGGGCACGA CCTTCCGCAT CTATCTGCCG CGCTATGTCG AGACCGCCGC CGACCGTGTG
GCGGAGGAGG CGGCTGCGGC GGCGACGCGG GTGGAGCCGG CCGATCTCAC CGGCAAGGGC
ACCATCCTTC TCGTCGAGGA CGAGGATGCG GTGCGGACCT TCGCGGCGCG GGCGCTTCAG
ACGCGGGGCT ATGACGTATT GCAGGCGGAA AGCGGCGAGG TGGCGCTGGC CGTGGTCGAA
CAATATGAGG GCCGGATCGA CCTCGTGGTG TCGGACGTCG TGATGCCGAA CATGGACGGG
CCCACCATGG CCAAGGCGCT CAAGGGCATG CTTCCCGACA CGCCGATCAT CTTCGTTTCG
GGCTATGCGG AGGACGCCTT CGCCAAGAGC CTCGACCCGA GCCAGGAGTT TCATTTCCTG
CCGAAACCCT TTTCGCTCAA GCAATTGGCC GCCGCCGTTA AGGAAGTCAT GAGCGCGAAG
TAG
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| Protein sequence | MAETPADYAD TIDNLDDSDE AAGESGWALP ARRWIVIGGV AIGIVATLLD ALGVHAFGVP
GGLTVFGLFS IATVVLYGLS GSNADALTRS PLAAADALTA LPDPCYVTDR RGSVLFANEA
YRSLAGDFDA GRPAPLERLL AGQGDAAEVV FRLAQAARTG FAAEEEVRLG PRGGPRIYRV
VVRPLSGRAG GAVWLFRDLT AERERAEAAE NIHKRSLAYV EHAPFGFFAA DSDGTLIFMN
ARLGGWLGME PLSIVQRRMK LDELVQGEAP ALAEGEAEES GQLPPLDVDL RGAEGRIIPV
RIMRTRVRAE NGRQGRIFAL VLNRTTGDKA EETARDAEMR FARFFNNAPI GIATVDADCR
IDNANKSFVA YVGEGVERGT KLTDLVVEED RAAVAETIGQ ALSGRLSAAP VDVRLVRNAE
RVGQLYAARV DTGAGASLVV YLIDATEQKS LELQFAQSQK MQAVGQLAGG VAHDFNNLLT
AIIGFCDLLL ARHQAGDPSF ADVVQIKQNA NRAANLTRQL LAFSRRQTLR PKVLSLTDAV
AELQNLLARL LTEKVELKIV HGRDLGLVKV DQNQLEQVII NLAVNARDAM PDGGKLTIRT
ANVSEADSRA LDHPLMPHGE YLLIEVADTG HGIPKENLGK IFEPFYTTKD PSKGTGLGLS
TVYGIVKQTG GFIFPYSTIG KGTTFRIYLP RYVETAADRV AEEAAAAATR VEPADLTGKG
TILLVEDEDA VRTFAARALQ TRGYDVLQAE SGEVALAVVE QYEGRIDLVV SDVVMPNMDG
PTMAKALKGM LPDTPIIFVS GYAEDAFAKS LDPSQEFHFL PKPFSLKQLA AAVKEVMSAK
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