| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5491 |
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| Symbol | |
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| ID | 5151643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5707315 |
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| End bp | 5709993 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560237 |
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| Product | cell cycle control histidine kinase CckA |
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| Protein accession | YP_001241359 |
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| Protein GI | 148256774 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.606378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATATC GGCTTGACGG GCTTGCGCTT GACCCGTCGA TTCAGGCAGG TGGAAGCGGG
GGCCGCCCGG ATCGACCGAG GCTCCCAGCC GACAGGTCGC GTCCTTTTGC CATGAGCGCC
GAACCAGACA ACGATGCGTT ACAGGACCAG GTGAACCTGC CGGAGCGGCC GCGCCGCAGC
GGCAGCATTC TCTTGATCCT GCTCGTCGCG TTCGGCCTGG TCGCCGTGGC GATCGCGCTG
ATGACGATCG GCCGCGCCCA GGCGCAGCCC TATATTCTAG GCCTGCTGTC GCTGCTGGCC
ACCGTGGGCC TGTTCAATCT GTTCGCTTTC GCCGCGGGGA TCGTCCGCTT CGCCGACAAG
ACGACCGACG ATCCGGTGAT GGGCGCGATC GCCGACCACG CCTTTGACGG GCTGGCGGTC
ACCGATCCGC GCGGCCACGT GGTCTATGCC AACGCCGCCT ATCTCGCCAT GACAGGGGCG
GCGAGCGCGC AGGAGGCGCG TCCGGTCGAG CGCGTGTTCA TCGGCAATCC CGACGTCTCC
GAGGCCGTGT TCCGCCTGCT CAAGGCCGCG CGCGAGGGCA AGCGGCAGCA GGAGGAGGTG
CGTATCACCG CTGCCGAGGG CGGCCAGGCC CGCTGGCTGC GGATGCGCGT CCGGCCGCTG
GGCCAGACCA AGCGCTATGC GCGATATGCG GTGTGGTCGA TCGCCGACAT CACCCGGGAT
CGCGAGCGCC AGGAGGACGT CTTCCAGGAG CTGCAGCATG CGATCGAATA TCTCGACCAT
GCGCCCTGCG GCTTCTTCTC CGTCAGTCCG GAGGGCAGCC TCGTTTATGT CAACGCGACC
CTTGCCAACT GGCTGGATTA CGACCTTGCC GAGATCGCGT CGGGGGGCCT GAAGCTGTCG
GACGTGGTCT CCGGTGACGG CGCGTCATTG CTGACATCGA TCGTGGCGGT GCCGGGCGAG
GTTCGGACCG AGGTATTCGA CATCGACCTG AAGATGCGCA GCGGCAAGAC CATGCCGGCG
CGGCTTTATC ACAAGCTCGC CTTCGGCGCC GACGGCAAGC CGGGTGCCTC GCGCACCCTG
GTCATCAGCC GCGCCCGCGA CGAGCGTTCC GATCCGGAGC GCGCCGCCGA GGTGCGCTTC
ATGCGCTTCT TCGACCACAC GCCGATGGCC ATCGCGACCG TCGACCGCGG CGGCGCGGTC
GTCAGGGCCA ATGCGCGCTA CGCCAAGCTG GCGCAGAGCG TCAGCGGCGA TGCGGCGGCG
GCGAAGTCGA TCTTCCGCAC CGTCAGCCAG CGCGACCGGC ACCTGTTGAT CGCCGCGATC
AATCAGGCGG CGGAAGGGCA GGCCGACATT CCGCCGGTCG AGGTGATGCT GGACGGCGCC
AAGGAGCGGT TCGGCCAGTT CTTCGTCACC GCCGTCGAGG AGGACGAGCG CGAGACCGAA
GCCGCGATCG TCTACATGCT CGAGACCACC GAGCGCCGCG CGCTGGAGAA CCAGATCAAC
CAGTCGCAGA AGATGGAGAT GGTCGGCCAG CTCGCCGGCG GCATCGCCCA CGACTTCAAC
AACGTGCTCT CGGCCATCAT GATGGCCAAC GATTTCCTGC TGAACGCGCA TAAGCCGACC
GACCCGTCGT TCCAGGACAT TATGCAGATC AAGCAGAATG CGACCCGCGC CGCCACCCTG
GTGCGGCAGT TGCTCGCTTT CTCCCGCCGC CAGACCTTGC GGCCGCAGGT GCTGGATCTC
GGTGACGCGC TGTCCGATCT GACGATGCTG TTGCGCCGGC TGATCGGCGA GAAGGTCAAG
CTCGACCTCG TGCACGGCCG CGATCTGTGG CCGGTCAAGG TCGACGTCTC GCAGTTCGAG
CAGGTGGTCG TGAACCTCGC GGTCAATGCC CGCGACGCCA TGCCGGACGG CGGCAAGCTC
TCGGTTCGCA CCGCCAATGT GTCGGCGGAC GAGGCGGCGC AGGGCGCCTA TAAAGGCATG
CCGGTCGCCG ACTATGTCCG CATCGAGATC AGCGATACCG GCACCGGCAT TCCGGCCGAG
ATCCGCGAGA AGATCTTCGA GCCGTTCTTC TCGACCAAGG AGGTCGGCAA GGGAACCGGC
CTCGGCCTGT CGACCGTCTA CGGCATCATC AAGCAGACCG GCGGCTTCAT CTATGTCGAC
AGCGAGGTCG GCAAGGGCAC CACGTTCCAG ATCTTCCTGC CGCGCCATCA CGTGGTGGCG
GAGGTCCCGG CCGAGCCGCA GGCCAGCAAT GGCGCCGCCA AGGAAGCGCC TGCCGCCGAG
GCGCCGAAGC CGCGGACCGA TCTGACCGGG CAGGGCACGA TCCTGCTGGT CGAGGACGAG
GAGGGCCTGA GGGCGCTGAA TGCGCGCGGC CTGCGCTCGC GCGGCTACAG CGTCATCGAG
GCCTCCAATG GCATCGAGGC GATGGAGGCG CTGGAGGAAT GCAACGGCGC GCTCGATCTC
GTGGTGTCCG ACGTGGTGAT GCCGGAGATG GATGGGCCGA CGCTGCTGAA GGTGATGCGT
GAGAAGAATC CCGACATCAA GATCATCTTC GTCTCGGGCT ATGCCGAGGA CGCGTTCGAG
AAGAGCCTGC CGGAGAACCA GCAATTCGCG TTCCTGCCGA AGCCCTTCAC GCTCAGCCAA
CTGGTCGCGG CGGTGAAGGA AACGATGGCG CCGCAATAG
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| Protein sequence | MEYRLDGLAL DPSIQAGGSG GRPDRPRLPA DRSRPFAMSA EPDNDALQDQ VNLPERPRRS
GSILLILLVA FGLVAVAIAL MTIGRAQAQP YILGLLSLLA TVGLFNLFAF AAGIVRFADK
TTDDPVMGAI ADHAFDGLAV TDPRGHVVYA NAAYLAMTGA ASAQEARPVE RVFIGNPDVS
EAVFRLLKAA REGKRQQEEV RITAAEGGQA RWLRMRVRPL GQTKRYARYA VWSIADITRD
RERQEDVFQE LQHAIEYLDH APCGFFSVSP EGSLVYVNAT LANWLDYDLA EIASGGLKLS
DVVSGDGASL LTSIVAVPGE VRTEVFDIDL KMRSGKTMPA RLYHKLAFGA DGKPGASRTL
VISRARDERS DPERAAEVRF MRFFDHTPMA IATVDRGGAV VRANARYAKL AQSVSGDAAA
AKSIFRTVSQ RDRHLLIAAI NQAAEGQADI PPVEVMLDGA KERFGQFFVT AVEEDERETE
AAIVYMLETT ERRALENQIN QSQKMEMVGQ LAGGIAHDFN NVLSAIMMAN DFLLNAHKPT
DPSFQDIMQI KQNATRAATL VRQLLAFSRR QTLRPQVLDL GDALSDLTML LRRLIGEKVK
LDLVHGRDLW PVKVDVSQFE QVVVNLAVNA RDAMPDGGKL SVRTANVSAD EAAQGAYKGM
PVADYVRIEI SDTGTGIPAE IREKIFEPFF STKEVGKGTG LGLSTVYGII KQTGGFIYVD
SEVGKGTTFQ IFLPRHHVVA EVPAEPQASN GAAKEAPAAE APKPRTDLTG QGTILLVEDE
EGLRALNARG LRSRGYSVIE ASNGIEAMEA LEECNGALDL VVSDVVMPEM DGPTLLKVMR
EKNPDIKIIF VSGYAEDAFE KSLPENQQFA FLPKPFTLSQ LVAAVKETMA PQ
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