Gene BBta_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3939 
Symbol 
ID5151317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4135099 
End bp4135515 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content60% 
IMG OID640558773 
Productputative two-component response regulatory protein, response regulator receiver 
Protein accessionYP_001239915 
Protein GI148255330 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.497488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.598376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA TCCTGGTCGT TGATGACGAA GTTGGCGTCT GCTGTGTCAT TCAGCATCTT 
CTCGTTCGTG AGGGATATGC GGTGACTGCC CTGACCGACG GACGCCAGGC GCTTGACGTT
GTTGCCCGCA GCGATTTCGC CGCGGCCCTG ATCGATCTCA ATCTGGCCGA CATCGACGGC
AACGACGTCA TACGAGCGGC ACGTGCGGCG CGCCCGAACA TGCCGATCGT CATGATGTCG
GGCATGGTCC TCGAATCAGA CCACGGAATG CCGGAGTCCC TGGGACTATC GGCGAGGGTT
CAGAGACTTC ATCGACTGGC CAAACCCTTC AAGCCGAAGG ACCTCGCGCA ATTGATGCGC
GAGATTCTTA CCCCCGATGA AGCGTTCGCC CCTGCCAGGA TGCAGTGCCG GCAGTAA
 
Protein sequence
MTNILVVDDE VGVCCVIQHL LVREGYAVTA LTDGRQALDV VARSDFAAAL IDLNLADIDG 
NDVIRAARAA RPNMPIVMMS GMVLESDHGM PESLGLSARV QRLHRLAKPF KPKDLAQLMR
EILTPDEAFA PARMQCRQ