| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4715 |
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| Symbol | |
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| ID | 8360891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5879019 |
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| End bp | 5880419 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966868 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003124353 |
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| Protein GI | 256423700 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.112239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0159313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAACTA TCCTGATCGT TGATGATGAG ATCCAGATCT GCACCTTGCT GACTAAGATC
CTGACTAAAG AAGGATATGA CGTTTCCCAC AGCGTATCCG GTTCCTCCGC ATTGAAAATG
GTAAAAGAGA AACACTACGA TGTGATCTTC TGCGACTACC GTTTAAAAGA TAAAGAAATC
GACGGCAGCG TACTTTCTCT TAAAATCAGG GAAATCAGTC CTGCTACCGG CATTATTGTG
ATGACAGGTT ACCCCGATGT GCGGGTTGCT ATTCAACTGA TCAAAGGCGG TATCTATGAT
TATGTGGTCA AACCGCTGAA TGCCGAACAG GCGATCCTGC TCGTACAGAA AGTACTGCTC
CATCAGTCAC TACATTCTAA AGAACAGTTG CCGGCGGCAA CGATTGCTTC CGAAACACCT
GTCTCTACCC TGGTCTCTCC CAAAGGAAGG CTTAGTCAGT TTGTATACGG TAATGGGAAT
TCTTCCAAGG AACTCCATGT ACAGATCAAA CTGATTGCAC CCACCAACTA TAGTGTGGTC
ATCCTGGGAG AAACCGGTAC CGGAAAAGAA TCCGTTGCCC ACCTGATCCA TAGTCAGAGT
AAGCGGAAGG ATCAACCGTT TGTCGCGATA GATTGTGGCA GCCTGTCACC CGAACTGGCC
TGCAGCGAAT TATTCGGACA TGAAAAGGGC GCCTTTACCG GGGCGATACA GGCCAAAACA
GGCGCATTCC ATGAAGCACA TGGCGGTACC CTGTTCCTTG ATGAAATCGG GAATCTCTCT
TATGAAGTGC AGACCGCCCT GCTGCGGGTC ATACAGGAAA GGGTGGTCAG ACCCGTAGGC
AGCACCAAGG AAACAAAGGT GGATATCCGG CTGATTGTGG CCTCTAATGA AGACCTCCAA
CACGCTGTTT TGAATGGGCG TTTCCGGGAT GACCTCTATT ACCGCCTGAA TGAATTTACG
GTAAATGTGC CGCCCCTGAG GGCCCGTAAA GACGATTTAC CACTGTTTAT CGCCACATTC
AAACAAACCA TCGAAGCAGA ACTCGGCAGG GAATGCGGAG AGATCACGGA GGAGGTTTAC
CATGCTTTTT ATAATTACTG CTGGCCGGGG AATATCCGGG AACTCAAGAA TGTCATGCGG
AGGATCTGTC TTCTGGCAAC GGACAATTCT CTGATCACCA GCGCCAATCT GCCGGAAGAA
TTATTACCCC AGGATGTAGA GCCGGGTCTC CCCCCGGGTA GCGACGAGAA TCTGAAAAAT
GTGTCCCGGC AGGCCGAATA CAAAAAGATA TTAGACGTCC TTCAGCAGGT TCGCTTTAAT
AAATCGGAAG CTGCCCGCCT GATGAACATT GACCGGAAAA CACTTTACAA TAAATTACAT
ACACTGAATA TTGTCCTGTG A
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| Protein sequence | MKTILIVDDE IQICTLLTKI LTKEGYDVSH SVSGSSALKM VKEKHYDVIF CDYRLKDKEI
DGSVLSLKIR EISPATGIIV MTGYPDVRVA IQLIKGGIYD YVVKPLNAEQ AILLVQKVLL
HQSLHSKEQL PAATIASETP VSTLVSPKGR LSQFVYGNGN SSKELHVQIK LIAPTNYSVV
ILGETGTGKE SVAHLIHSQS KRKDQPFVAI DCGSLSPELA CSELFGHEKG AFTGAIQAKT
GAFHEAHGGT LFLDEIGNLS YEVQTALLRV IQERVVRPVG STKETKVDIR LIVASNEDLQ
HAVLNGRFRD DLYYRLNEFT VNVPPLRARK DDLPLFIATF KQTIEAELGR ECGEITEEVY
HAFYNYCWPG NIRELKNVMR RICLLATDNS LITSANLPEE LLPQDVEPGL PPGSDENLKN
VSRQAEYKKI LDVLQQVRFN KSEAARLMNI DRKTLYNKLH TLNIVL
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