Gene Haur_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3293 
Symbol 
ID5735163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4157721 
End bp4159799 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content49% 
IMG OID641280441 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_001546058 
Protein GI159899811 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCAC ACCACGCCAG CGAACAGCCC ACCGTTGCCC AGCATGCTAG CCTTGCTCGC 
CATGAATATG CCGCCGAAGC TGTTCAGCCC CAGTCTGATC GTGGTGGCTT GCTTGAACAG
ACGCAAACGA TTTTGGGCCA AAACTTGCCC TTGGATATGC TCTATCGCCA AATTGTGACG
GCGATTGCGC GTAGTTTTGC TAATAGCTTA ATCAGCATTT ACGCCGCCCA CACCGATATT
TTGCAACTGC AATGTCAGCA TGGCTTTGGG CATAACCCTG AGCAACTGAG TTTCCAACAG
GGCATTGTTG GGCGTTGCGC CCGCACCAAA CAAGCTTATT TGATTGCCTA TGTTGATCAA
GACCCCGATT TTATTCGTAG CCATCCGCAT ATTCAATCGT CGATCTGTAT TCCACTCTTG
GCTGAGCAAC AATTGCTCGG GGTATTGATG GTTGAGAGCA TTGTGGATAC GCTGAATCAA
GCTGATGCGG AAATTTTGGC AAATGTTTGT CAACAACTCA GTAATGCGAT TGCTCAAGCA
GCGCTTTGGC GACCAAATAG CCTGATCGAT CAACATTATC GGGCGATGCT CGATGCCATG
CCTGATGGCA TTGTAGTGCA ACAGGCGGGC CGAATTGTCT ATATTAATGC AATTGGGATT
GAATTGTTAG GCTTTGAAAA TCGTCATCAA CTGCTTGGGA GCGATCTCGC AGGCTTGCTC
GAACAAACAT CGAATACCAT CCAAAAATTA TTTGATCAGG CCATTACTAC GAATCAAGCG
CTGAGCCACG AACTGCAATA TGATACAACC AAAACGCCAG AAATCCCCCT AAGGTTGACC
ATTATTCCCA TAACTTTTGC TGGTAATACA GCGGTACAGA TAGTAATTCG CGATCATACG
GCCATCCAAC AACGTGAAGC TGCCCAACAA CTTGCCAACG AACGCGAAAA ACGCAAAAGT
CTTGGCCTGC TCGCCGGAGG CATCGCCCAC GATTTCAACA ATATTTTGAT GGGCATTCGT
GGCAATGTTA GCCTTGGTTT GCTCGATCTC ATTCCGACCC ACCCAATTTA TCACCAACTG
CAAGAGATCG AAAAGCTCGC AATTCGAGCA ACCGAGCTAA CCCAGCAGAT TGTCGCCTAC
ACCGGAGGCA GCCTTTTTGT CAGTAGTACG GTCGATCTGA ATGAGCAATT GCGTGAGCTA
ACCACGACGT TTAGTGAGCA GGCCCATCCA ACGACCAGCA TAACCTATGA GCTTGACGAT
CAATTAGGGC TACTCAAAGG CGATGTTAAT CAAATCCGCC AAATGATCTT GAGTATCTTC
AAAAATAGTG TTGAAGCGAT CGAGCATCGC TATGGAGCCA TTCAGATTAC CAGCAAGCTC
CAAACCTACA CCCAAGCTCC ACATACCGCT ACTGGCTTAC CCAAACTTGC GCCTGGCAGC
TATCTCACCC TGAGTATTCG GGATAATGGT GTTGGTATGG ATGCTCGCAC CCAACGGCTG
ATGTTTGATC CCTATTTTAG TACCAAGTTT ACTGGACGCG GCCTTGGTTT AGCCGCTGTT
TTGGGTATGG TACGAGCGCA TCATGGGTCA ATTGCCGTGT GGAGCCAACC GCAAATGGGA
ACGGAGGTCA CTGTGTTATT ACCACCACAT TCGATCTTGC AGCCAACCCC CGCAGCGCCG
AACGAGGACG TTCATTCAGT TCATAATGTC GTGATGCTGA TCGACGATGA ACCAGCAGTT
CGCATGGTTA CTGAACGCAT GCTGCAACGT TTAGGCCTAA CTGTTCAAGG ATTTAGTGAT
GGTGAGAGTG CGATCAAGGT CTTTCGTGAG CATGCCCATG AATATCAATT GGTGCTGCTT
GATTTGACCA TGCCCCAATT TAATGGCATC GATACAGCCC ATGGCTTGCG GGCCATTCGC
GCCGATGTGC CAATTGTTTT GATGAGTGGC TATAGTGTCG ATTCGATGCT CGACCCACTG
TTGAATGATG GTCTGGCGGG ATTCCTACAA AAACCTTTTA CGCTCGGCGA TTTGCAACGC
ACAGTCAATA GCGTTTCGGC CTTGAAAGCA CGGAATTGA
 
Protein sequence
MDPHHASEQP TVAQHASLAR HEYAAEAVQP QSDRGGLLEQ TQTILGQNLP LDMLYRQIVT 
AIARSFANSL ISIYAAHTDI LQLQCQHGFG HNPEQLSFQQ GIVGRCARTK QAYLIAYVDQ
DPDFIRSHPH IQSSICIPLL AEQQLLGVLM VESIVDTLNQ ADAEILANVC QQLSNAIAQA
ALWRPNSLID QHYRAMLDAM PDGIVVQQAG RIVYINAIGI ELLGFENRHQ LLGSDLAGLL
EQTSNTIQKL FDQAITTNQA LSHELQYDTT KTPEIPLRLT IIPITFAGNT AVQIVIRDHT
AIQQREAAQQ LANEREKRKS LGLLAGGIAH DFNNILMGIR GNVSLGLLDL IPTHPIYHQL
QEIEKLAIRA TELTQQIVAY TGGSLFVSST VDLNEQLREL TTTFSEQAHP TTSITYELDD
QLGLLKGDVN QIRQMILSIF KNSVEAIEHR YGAIQITSKL QTYTQAPHTA TGLPKLAPGS
YLTLSIRDNG VGMDARTQRL MFDPYFSTKF TGRGLGLAAV LGMVRAHHGS IAVWSQPQMG
TEVTVLLPPH SILQPTPAAP NEDVHSVHNV VMLIDDEPAV RMVTERMLQR LGLTVQGFSD
GESAIKVFRE HAHEYQLVLL DLTMPQFNGI DTAHGLRAIR ADVPIVLMSG YSVDSMLDPL
LNDGLAGFLQ KPFTLGDLQR TVNSVSALKA RN