Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3293 |
Symbol | |
ID | 5735163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 4157721 |
End bp | 4159799 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641280441 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001546058 |
Protein GI | 159899811 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACCCAC ACCACGCCAG CGAACAGCCC ACCGTTGCCC AGCATGCTAG CCTTGCTCGC CATGAATATG CCGCCGAAGC TGTTCAGCCC CAGTCTGATC GTGGTGGCTT GCTTGAACAG ACGCAAACGA TTTTGGGCCA AAACTTGCCC TTGGATATGC TCTATCGCCA AATTGTGACG GCGATTGCGC GTAGTTTTGC TAATAGCTTA ATCAGCATTT ACGCCGCCCA CACCGATATT TTGCAACTGC AATGTCAGCA TGGCTTTGGG CATAACCCTG AGCAACTGAG TTTCCAACAG GGCATTGTTG GGCGTTGCGC CCGCACCAAA CAAGCTTATT TGATTGCCTA TGTTGATCAA GACCCCGATT TTATTCGTAG CCATCCGCAT ATTCAATCGT CGATCTGTAT TCCACTCTTG GCTGAGCAAC AATTGCTCGG GGTATTGATG GTTGAGAGCA TTGTGGATAC GCTGAATCAA GCTGATGCGG AAATTTTGGC AAATGTTTGT CAACAACTCA GTAATGCGAT TGCTCAAGCA GCGCTTTGGC GACCAAATAG CCTGATCGAT CAACATTATC GGGCGATGCT CGATGCCATG CCTGATGGCA TTGTAGTGCA ACAGGCGGGC CGAATTGTCT ATATTAATGC AATTGGGATT GAATTGTTAG GCTTTGAAAA TCGTCATCAA CTGCTTGGGA GCGATCTCGC AGGCTTGCTC GAACAAACAT CGAATACCAT CCAAAAATTA TTTGATCAGG CCATTACTAC GAATCAAGCG CTGAGCCACG AACTGCAATA TGATACAACC AAAACGCCAG AAATCCCCCT AAGGTTGACC ATTATTCCCA TAACTTTTGC TGGTAATACA GCGGTACAGA TAGTAATTCG CGATCATACG GCCATCCAAC AACGTGAAGC TGCCCAACAA CTTGCCAACG AACGCGAAAA ACGCAAAAGT CTTGGCCTGC TCGCCGGAGG CATCGCCCAC GATTTCAACA ATATTTTGAT GGGCATTCGT GGCAATGTTA GCCTTGGTTT GCTCGATCTC ATTCCGACCC ACCCAATTTA TCACCAACTG CAAGAGATCG AAAAGCTCGC AATTCGAGCA ACCGAGCTAA CCCAGCAGAT TGTCGCCTAC ACCGGAGGCA GCCTTTTTGT CAGTAGTACG GTCGATCTGA ATGAGCAATT GCGTGAGCTA ACCACGACGT TTAGTGAGCA GGCCCATCCA ACGACCAGCA TAACCTATGA GCTTGACGAT CAATTAGGGC TACTCAAAGG CGATGTTAAT CAAATCCGCC AAATGATCTT GAGTATCTTC AAAAATAGTG TTGAAGCGAT CGAGCATCGC TATGGAGCCA TTCAGATTAC CAGCAAGCTC CAAACCTACA CCCAAGCTCC ACATACCGCT ACTGGCTTAC CCAAACTTGC GCCTGGCAGC TATCTCACCC TGAGTATTCG GGATAATGGT GTTGGTATGG ATGCTCGCAC CCAACGGCTG ATGTTTGATC CCTATTTTAG TACCAAGTTT ACTGGACGCG GCCTTGGTTT AGCCGCTGTT TTGGGTATGG TACGAGCGCA TCATGGGTCA ATTGCCGTGT GGAGCCAACC GCAAATGGGA ACGGAGGTCA CTGTGTTATT ACCACCACAT TCGATCTTGC AGCCAACCCC CGCAGCGCCG AACGAGGACG TTCATTCAGT TCATAATGTC GTGATGCTGA TCGACGATGA ACCAGCAGTT CGCATGGTTA CTGAACGCAT GCTGCAACGT TTAGGCCTAA CTGTTCAAGG ATTTAGTGAT GGTGAGAGTG CGATCAAGGT CTTTCGTGAG CATGCCCATG AATATCAATT GGTGCTGCTT GATTTGACCA TGCCCCAATT TAATGGCATC GATACAGCCC ATGGCTTGCG GGCCATTCGC GCCGATGTGC CAATTGTTTT GATGAGTGGC TATAGTGTCG ATTCGATGCT CGACCCACTG TTGAATGATG GTCTGGCGGG ATTCCTACAA AAACCTTTTA CGCTCGGCGA TTTGCAACGC ACAGTCAATA GCGTTTCGGC CTTGAAAGCA CGGAATTGA
|
Protein sequence | MDPHHASEQP TVAQHASLAR HEYAAEAVQP QSDRGGLLEQ TQTILGQNLP LDMLYRQIVT AIARSFANSL ISIYAAHTDI LQLQCQHGFG HNPEQLSFQQ GIVGRCARTK QAYLIAYVDQ DPDFIRSHPH IQSSICIPLL AEQQLLGVLM VESIVDTLNQ ADAEILANVC QQLSNAIAQA ALWRPNSLID QHYRAMLDAM PDGIVVQQAG RIVYINAIGI ELLGFENRHQ LLGSDLAGLL EQTSNTIQKL FDQAITTNQA LSHELQYDTT KTPEIPLRLT IIPITFAGNT AVQIVIRDHT AIQQREAAQQ LANEREKRKS LGLLAGGIAH DFNNILMGIR GNVSLGLLDL IPTHPIYHQL QEIEKLAIRA TELTQQIVAY TGGSLFVSST VDLNEQLREL TTTFSEQAHP TTSITYELDD QLGLLKGDVN QIRQMILSIF KNSVEAIEHR YGAIQITSKL QTYTQAPHTA TGLPKLAPGS YLTLSIRDNG VGMDARTQRL MFDPYFSTKF TGRGLGLAAV LGMVRAHHGS IAVWSQPQMG TEVTVLLPPH SILQPTPAAP NEDVHSVHNV VMLIDDEPAV RMVTERMLQR LGLTVQGFSD GESAIKVFRE HAHEYQLVLL DLTMPQFNGI DTAHGLRAIR ADVPIVLMSG YSVDSMLDPL LNDGLAGFLQ KPFTLGDLQR TVNSVSALKA RN
|
| |