More than 300 homologs were found in PanDaTox collection
for query gene Sfum_2292 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_2292  two component, sigma54 specific, Fis family transcriptional regulator  100 
 
 
462 aa  944    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1340  two component, sigma54 specific, Fis family transcriptional regulator  47.23 
 
 
457 aa  402  1e-111  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4272  sigma-54 dependent response regulator  46.24 
 
 
457 aa  400  9.999999999999999e-111  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2807  two component, sigma54 specific, Fis family transcriptional regulator  46.68 
 
 
466 aa  400  9.999999999999999e-111  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.75933  n/a   
 
 
-
 
NC_011149  SeAg_B2721  sigma-54 dependent transcriptional regulator/response regulator  47.01 
 
 
445 aa  395  1e-109  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2804  transcriptional regulatory protein ZraR  46.78 
 
 
445 aa  392  1e-108  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2825  transcriptional regulator ZraR  47.01 
 
 
445 aa  394  1e-108  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.479389  normal 
 
 
-
 
NC_007484  Noc_0785  Fis family two component transcriptional regulator  48.04 
 
 
456 aa  393  1e-108  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2763  transcriptional regulator ZraR  47.01 
 
 
445 aa  394  1e-108  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2938  transcriptional regulator ZraR  47.01 
 
 
445 aa  394  1e-108  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0911  two component, sigma54 specific, Fis family transcriptional regulator  45.61 
 
 
456 aa  392  1e-108  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1055  two component, sigma54 specific, Fis family transcriptional regulator  45.61 
 
 
456 aa  392  1e-108  Methylobacillus flagellatus KT  Bacteria  normal  0.523432  normal 
 
 
-
 
NC_011901  Tgr7_2494  response regulator receiver protein  47.59 
 
 
452 aa  392  1e-108  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0498  two component response regulator  47.44 
 
 
451 aa  389  1e-107  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2568  two component, sigma54 specific, transcriptional regulator, Fis family  48.04 
 
 
457 aa  389  1e-107  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0491002  normal 
 
 
-
 
NC_012880  Dd703_2768  putative two component, sigma54 specific, transcriptional regulator, Fis family  46.46 
 
 
445 aa  389  1e-107  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_2955  sigma-54 dependent DNA-binding response regulator, putative  48.04 
 
 
457 aa  389  1e-107  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1603  two component, sigma54 specific, Fis family transcriptional regulator  46.24 
 
 
449 aa  390  1e-107  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3039  two component, sigma54 specific, Fis family transcriptional regulator  45.9 
 
 
445 aa  386  1e-106  Enterobacter sp. 638  Bacteria  normal  0.992832  normal  0.337936 
 
 
-
 
NC_011206  Lferr_0608  two component, sigma54 specific, transcriptional regulator, Fis family  45.08 
 
 
461 aa  386  1e-106  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0965  putative two component, sigma54 specific, transcriptional regulator, Fis family  44.44 
 
 
462 aa  387  1e-106  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_0447  sigma-54 dependent DNA-binding response regulator  45.08 
 
 
461 aa  386  1e-106  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01723  two-component system response regulator  45.25 
 
 
446 aa  386  1e-106  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0872  two component, sigma54 specific, Fis family transcriptional regulator  45.13 
 
 
471 aa  386  1e-106  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0650247 
 
 
-
 
NC_012917  PC1_3049  putative two component, sigma54 specific, transcriptional regulator, Fis family  45.23 
 
 
445 aa  382  1e-105  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3651  two component, sigma54 specific, Fis family transcriptional regulator  45.8 
 
 
445 aa  383  1e-105  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1259  two component, sigma54 specific, Fis family transcriptional regulator  45.58 
 
 
445 aa  383  1e-105  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1226  putative two component, sigma54 specific, transcriptional regulator, Fis family  45.01 
 
 
445 aa  382  1e-105  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1152  sigma-54 dependent DNA-binding response regulator  45.58 
 
 
445 aa  383  1e-105  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1117  two component, sigma54 specific, Fis family transcriptional regulator  44.52 
 
 
466 aa  382  1e-105  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0717  two component, sigma54 specific, Fis family transcriptional regulator  44.69 
 
 
466 aa  384  1e-105  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3629  two-component system response regulator  45.58 
 
 
445 aa  383  1e-105  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3376  two component, sigma54 specific, Fis family transcriptional regulator  45.12 
 
 
462 aa  383  1e-105  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.193945  normal 
 
 
-
 
NC_012912  Dd1591_1085  putative two component, sigma54 specific, transcriptional regulator, Fis family  46.12 
 
 
445 aa  381  1e-104  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  43.57 
 
 
470 aa  380  1e-104  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_011883  Ddes_0769  two component, sigma54 specific, transcriptional regulator, Fis family  46.9 
 
 
453 aa  379  1e-104  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.165448  n/a   
 
 
-
 
NC_007614  Nmul_A1161  two component, sigma54 specific, Fis family transcriptional regulator  47.15 
 
 
453 aa  381  1e-104  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2839  sigma-54 dependent response regulator  47.01 
 
 
444 aa  380  1e-104  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2707  sigma-54 dependent response regulator  47.01 
 
 
444 aa  380  1e-104  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2786  two component, sigma54 specific, Fis family transcriptional regulator  44.4 
 
 
477 aa  379  1e-104  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2942  two component, sigma54 specific, transcriptional regulator, Fis family  45.39 
 
 
451 aa  381  1e-104  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2707  sigma-54 dependent response regulator  47.01 
 
 
444 aa  380  1e-104  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_4152  two component, sigma54 specific, Fis family transcriptional regulator  45.33 
 
 
480 aa  380  1e-104  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.038607 
 
 
-
 
CP001509  ECD_02446  predicted DNA-binding response regulator in two-component system  46.78 
 
 
444 aa  378  1e-103  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02410  hypothetical protein  46.78 
 
 
444 aa  378  1e-103  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1114  putative two component, sigma54 specific, transcriptional regulator, Fis family  46.78 
 
 
444 aa  378  1e-103  Escherichia coli DH1  Bacteria  normal  0.922386  n/a   
 
 
-
 
NC_010468  EcolC_1123  two component, sigma54 specific, Fis family transcriptional regulator  46.78 
 
 
444 aa  378  1e-103  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  43.57 
 
 
470 aa  375  1e-103  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_007298  Daro_1804  two component, sigma54 specific, Fis family transcriptional regulator  44.64 
 
 
469 aa  377  1e-103  Dechloromonas aromatica RCB  Bacteria  normal  0.0358984  normal  0.379225 
 
 
-
 
NC_010658  SbBS512_E2919  sigma-54 dependent response regulator  46.78 
 
 
444 aa  378  1e-103  Shigella boydii CDC 3083-94  Bacteria  normal  0.70731  n/a   
 
 
-
 
NC_009675  Anae109_1798  two component, sigma54 specific, Fis family transcriptional regulator  45.07 
 
 
466 aa  378  1e-103  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.634231  normal 
 
 
-
 
NC_011353  ECH74115_3788  sigma-54 dependent response regulator  46.78 
 
 
444 aa  378  1e-103  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1713  sigma-54 dependent DNA-binding response regulator  44.52 
 
 
460 aa  375  1e-102  Methylococcus capsulatus str. Bath  Bacteria  normal  0.91858  n/a   
 
 
-
 
NC_007404  Tbd_2771  two component Fis family transcriptional regulator  45.8 
 
 
449 aa  374  1e-102  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.195731 
 
 
-
 
NC_007498  Pcar_2145  two component signal transduction response regulator  47.83 
 
 
492 aa  373  1e-102  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2001  two component, sigma54 specific, Fis family transcriptional regulator  44.03 
 
 
454 aa  372  1e-102  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0823  two component, sigma54 specific, transcriptional regulator, Fis family  42.54 
 
 
456 aa  375  1e-102  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.449732 
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  43.98 
 
 
457 aa  369  1e-101  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3647  two component, sigma-54 specific, Fis family transcriptional regulator  42.61 
 
 
471 aa  369  1e-101  Geobacter uraniireducens Rf4  Bacteria  normal  0.0209004  n/a   
 
 
-
 
NC_007517  Gmet_0702  two component, sigma54 specific, Fis family transcriptional regulator  42.39 
 
 
460 aa  369  1e-101  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_0445  two component, sigma54 specific, transcriptional regulator, Fis family  44.2 
 
 
481 aa  370  1e-101  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0427  two component, sigma54 specific, Fis family transcriptional regulator  41.78 
 
 
458 aa  370  1e-101  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2187  two component, sigma54 specific, Fis family transcriptional regulator  44.3 
 
 
456 aa  370  1e-101  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2280  two component, sigma54 specific, transcriptional regulator, Fis family  41.36 
 
 
453 aa  369  1e-101  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.620123 
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  45.77 
 
 
465 aa  366  1e-100  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1869  two component, sigma54 specific, transcriptional regulator, Fis family  43.95 
 
 
464 aa  367  1e-100  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0446  two component, sigma54 specific, transcriptional regulator, Fis family  43.97 
 
 
481 aa  368  1e-100  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1385  acetoacetate metabolism regulatory protein AtoC  42.79 
 
 
460 aa  365  1e-100  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1954  two component, sigma54 specific, transcriptional regulator, Fis family  43.02 
 
 
464 aa  365  1e-100  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.611403  n/a   
 
 
-
 
NC_007760  Adeh_0417  two component, sigma54 specific, Fis family transcriptional regulator  43.97 
 
 
474 aa  367  1e-100  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.45134  n/a   
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  45.05 
 
 
463 aa  367  1e-100  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_013223  Dret_0970  two component, sigma54 specific, transcriptional regulator, Fis family  44.16 
 
 
473 aa  365  1e-100  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0157817  hitchhiker  0.00000223455 
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  43.33 
 
 
457 aa  363  3e-99  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0085  two component, sigma-54 specific, Fis family transcriptional regulator  45.92 
 
 
452 aa  362  6e-99  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0198  two component, sigma54 specific, transcriptional regulator, Fis family  42.05 
 
 
461 aa  362  7.0000000000000005e-99  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1222  putative two component, sigma54 specific, transcriptional regulator, Fis family  46.7 
 
 
475 aa  362  8e-99  Thauera sp. MZ1T  Bacteria  normal  0.20015  n/a   
 
 
-
 
NC_009483  Gura_1428  two component, sigma-54 specific, Fis family transcriptional regulator  42.57 
 
 
460 aa  362  1e-98  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2009  two component, sigma54 specific, Fis family transcriptional regulator  43.47 
 
 
463 aa  361  1e-98  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0621  two component, sigma54 specific, Fis family transcriptional regulator  41.24 
 
 
472 aa  361  2e-98  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2764  two component, sigma54 specific, Fis family transcriptional regulator  42.03 
 
 
466 aa  361  2e-98  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2694  two component, sigma54 specific, transcriptional regulator, Fis family  43.39 
 
 
461 aa  360  3e-98  Geobacter sp. M21  Bacteria  n/a    hitchhiker  7.62039e-17 
 
 
-
 
NC_011146  Gbem_1522  two component, sigma54 specific, transcriptional regulator, Fis family  44.3 
 
 
461 aa  359  5e-98  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1032  two component, sigma54 specific, Fis family transcriptional regulator  43.82 
 
 
461 aa  359  5e-98  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.454426 
 
 
-
 
NC_002939  GSU0963  sigma-54 dependent DNA-binding response regulator  42.64 
 
 
467 aa  359  6e-98  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2678  two component, sigma-54 specific, Fis family transcriptional regulator  44.01 
 
 
457 aa  359  7e-98  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2442  two component, sigma54 specific, Fis family transcriptional regulator  43.67 
 
 
480 aa  358  9e-98  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3302  two component, sigma54 specific, transcriptional regulator, Fis family  43.15 
 
 
472 aa  358  9.999999999999999e-98  Haliangium ochraceum DSM 14365  Bacteria  normal  0.334689  normal  0.605218 
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  45.12 
 
 
460 aa  357  1.9999999999999998e-97  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  40.26 
 
 
461 aa  357  1.9999999999999998e-97  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  43.76 
 
 
456 aa  357  1.9999999999999998e-97  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  40.26 
 
 
461 aa  356  3.9999999999999996e-97  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  40.26 
 
 
461 aa  356  3.9999999999999996e-97  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  40.26 
 
 
461 aa  356  3.9999999999999996e-97  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  40.26 
 
 
461 aa  356  3.9999999999999996e-97  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_013173  Dbac_2653  putative two component, sigma54 specific, transcriptional regulator, Fis family  42.44 
 
 
482 aa  356  5e-97  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0984  two component, sigma54 specific, Fis family transcriptional regulator  42.83 
 
 
455 aa  356  5e-97  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1802  two component, sigma-54 specific, Fis family transcriptional regulator  44.47 
 
 
459 aa  355  6.999999999999999e-97  Geobacter uraniireducens Rf4  Bacteria  normal  0.0135454  n/a   
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  40.04 
 
 
461 aa  355  7.999999999999999e-97  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  42.04 
 
 
455 aa  355  1e-96  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_007517  Gmet_3158  two component, sigma54 specific, Fis family transcriptional regulator  44.1 
 
 
462 aa  355  1e-96  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
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