| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1340 |
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| Symbol | |
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| ID | 4710896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1447775 |
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| End bp | 1449148 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639855807 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001002909 |
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| Protein GI | 121998122 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAC GTCCACGAAT CCTCGTCGTC GACGACGACC CGAGCCTCTG CCGGCTCATG
GAGATGCGCC TGGAGGCCTC CGGCTACGCA CCGACCACGT GCGAAAGCGG CGAACGGGCC
CTGGCCGAGC TGGAGCGCCA GCCCGCGGAC GCCGTGATCA CCGACCTGCG CATGGAAGGC
ATGGACGGGC TGGCGCTGTT CGATGCCGTA CGCGAACGCT GGCCGGCGCT ACCCGTCATC
ATCCTGACCG CCCACGGCTC CATCCAGGAC GCGGTCGAGG CGACCCGCCG TGGCGTGCAC
GAATTCCTCA CCAAGCCCTT CGACCCCCCT GAACTGCTCG AGCAACTGGA GAAGGCCCTC
ACCGCCCGCG GCGGGCAGAC CTCCGATACC GCCCGCGAAG CCGGTCGGCG TCACGGCCTG
GTGACCCGCA GCCCGCGCAT GGAAGAGGTC CTTGAGCGTG CCCTGTTGGT GGCCGACTCC
GACGCCAATG TCCTGATCCA GGGAGCGAGC GGCTCAGGTA AGGAGATCGT CGCCCGCGCC
GTGCACGGTA ACAGCCCCCG CTCGCAAGGG CCGTTCATCC CGGTGAACTG CGGCGCCATC
CCTGAGACCC TGCTCGAATC CGAACTCTTC GGCCATGTCC GCGGCGCCTT CACCGGCGCC
GATCGGGATC GCGCCGGCCT ATTCCGCGAC GCCGACGGCG GCACCCTGTT CCTCGACGAG
ATCGGTGATA TGCCCCTGCA GCTGCAGGTC AAGCTCCTGC GGGCCCTCCA GGAGCAGGTC
ATCCGACCGG TCGGCGGACG GGATCCGATC CCCATCAACG TGCGCGTCAT CTCCGCCACC
CACCGCGACC TGGAGGCAGC CCGCGCCGAC GGGTCCTTCC GGGAAGACCT CTACTTCCGC
CTGGCCGTCG TCACCCTCGC CCTGCCCCCG CTGGCCGAAC GGCGTGAAGA CATCCCCCTG
CTGGCCCGGC ACTTCCTGGC CGAGGCCACG CGTCGTCACG GGCGCCAGGT CGAAGACCTG
TCACCGGAAG CCATCGAGGC GTTGGTCCAG GCCGAGTGGC CGGGCAACGT GCGCCAGCTG
CAGAACGTCA TCGAGCAGTG CGTGGCCCTG AGCACCAACG AGATCCTGCC GGAGCGCCTG
GTACGGCAGG CGCTGAACCA GGATCAGGAG CCCTCGATTC CGACGCTGGC GGAGGCCCGT
GAGGCGTTCG AGCGCGACTA CCTGATCCGC CTGCTCAAGC TCACCGAGGG GAATGTGAGC
CAGGCTGCCC GGCTCGCCGG CCGCAACCGC ACCGAGTTTT ACCGCCTGCT CGGTCGCCAC
CACCTCCAGG TGGCCGACTT CAAGGGCGGC ACCGATCCGA ACGAGGACAA CTAG
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| Protein sequence | MSERPRILVV DDDPSLCRLM EMRLEASGYA PTTCESGERA LAELERQPAD AVITDLRMEG
MDGLALFDAV RERWPALPVI ILTAHGSIQD AVEATRRGVH EFLTKPFDPP ELLEQLEKAL
TARGGQTSDT AREAGRRHGL VTRSPRMEEV LERALLVADS DANVLIQGAS GSGKEIVARA
VHGNSPRSQG PFIPVNCGAI PETLLESELF GHVRGAFTGA DRDRAGLFRD ADGGTLFLDE
IGDMPLQLQV KLLRALQEQV IRPVGGRDPI PINVRVISAT HRDLEAARAD GSFREDLYFR
LAVVTLALPP LAERREDIPL LARHFLAEAT RRHGRQVEDL SPEAIEALVQ AEWPGNVRQL
QNVIEQCVAL STNEILPERL VRQALNQDQE PSIPTLAEAR EAFERDYLIR LLKLTEGNVS
QAARLAGRNR TEFYRLLGRH HLQVADFKGG TDPNEDN
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