Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2919 |
Symbol | |
ID | 6269459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2722584 |
End bp | 2723918 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641726862 |
Product | sigma-54 dependent response regulator |
Protein accession | YP_001881333 |
Protein GI | 187732936 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.70731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCATA AACCTGCGCA TTTATTATTG GTCGATGACG ATCCGGGATT GCTGAAACTG CTTGGCCTGC GCCTGACCAG CGAAGGCTAC AGTGTGGTCA CGGCGGAAAG TGGCGCTGAA GGATTACGGG TACTGAATCG CGAAAAAGTA GATTTAGTTA TCAGCGACCT GCGGATGGAT GAAATGGACG GTATGCAGCT ATTTGCTGAA ATCCAGAAAG TGCAGCCGGG AATGCCAGTA ATTATTCTTA CTGCGCATGG TTCTATCCCC GATGCCGTTG CTGCAACACA GCAGGGCGTT TTTAGTTTCC TCACCAAGCC TGTCGACAAA GACGCGCTAT ATCAGGCAAT TGACGATGCG CTGGAGCAAT CCGCGCCAGC CACCGATGAA CGCTGGCGCG AGGCAATTGT CACCCGCAGC CCGCTGATGC TGCGTTTGCT GGAACAGGCG CGGCTGGTGG CGCAATCAGA CGTCAGCGTT TTGATTAACG GTCAGAGCGG CACCGGGAAA GAGATTTTCG CCCAGGCTAT CCACAACGCC AGCCCGCGCA ACAGCAAACC ATTTATTGCT ATTAACTGTG GCGCATTGCC CGAGCAATTG CTGGAGTCGG AGCTGTTTGG TCATGCGCGT GGCGCGTTTA CTGGCGCTGT CAGCAATCGC GAAGGTTTAT TCCAGGCGGC GGAAGGCGGA ACGCTATTTC TCGATGAAAT TGGCGATATG CCTGCGCCGT TACAGGTCAA ACTGCTGCGC GTGTTGCAGG AGCGTAAAGT GCGCCCGCTG GGCAGTAACC GCGATATTGA TATCAATGTG CGGATTATTT CTGCCACTCA CCGTGATCTG CCAAAAGCGA TGGCGCGCGG GGAATTCCGC GAAGATCTCT ATTACCGCCT CAACGTTGTC AGCCTGAAAA TTCCGGCTCT GGCAGAGCGC ACAGAAGACA TTCCGCTTCT GGCAAATCAC CTGTTGCGCC AGGCGGCAGA GCGACATAAA CCGTTTGTCC GCGCGTTCTC CACTGATGCG ATGAAACGCC TGATGACCGC TAGCTGGCCG GGTAATGTGC GCCAGTTGGT CAACGTGATT GAACAGTGCG TGGCGCTGAC CTCATCTCCG GTTATTAGCG ATGCATTAGT AGAGCAGGCG CTGGAGGGTG AAAACACGGC GCTGCCAACC TTTGTTGAGG CACGTAATCA GTTTGAACTC AACTATTTGC GTAAGCTGCT GCAAATTACC AAAGGCAACG TCACCCACGC GGCGAGAATG GCGGGGCGCA ACCGGACAGA ATTTTATAAA CTGCTTTCCC GACACGAGCT GGATGCAAAC GATTTCAAGG AATGA
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Protein sequence | MSHKPAHLLL VDDDPGLLKL LGLRLTSEGY SVVTAESGAE GLRVLNREKV DLVISDLRMD EMDGMQLFAE IQKVQPGMPV IILTAHGSIP DAVAATQQGV FSFLTKPVDK DALYQAIDDA LEQSAPATDE RWREAIVTRS PLMLRLLEQA RLVAQSDVSV LINGQSGTGK EIFAQAIHNA SPRNSKPFIA INCGALPEQL LESELFGHAR GAFTGAVSNR EGLFQAAEGG TLFLDEIGDM PAPLQVKLLR VLQERKVRPL GSNRDIDINV RIISATHRDL PKAMARGEFR EDLYYRLNVV SLKIPALAER TEDIPLLANH LLRQAAERHK PFVRAFSTDA MKRLMTASWP GNVRQLVNVI EQCVALTSSP VISDALVEQA LEGENTALPT FVEARNQFEL NYLRKLLQIT KGNVTHAARM AGRNRTEFYK LLSRHELDAN DFKE
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