Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2568 |
Symbol | |
ID | 6878567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2539149 |
End bp | 2540522 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642790425 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_002220969 |
Protein GI | 198284648 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0491002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAG GCAGAATCTT ACTCGTGGAT GATGACGCCG ATCTCCTGCG TCTGTTGTCC CTGCGCATGA AGGCGGCCGG CTATGTGGTC AGCACCGCGG CCAGCGGCAG CGAAGCGTTG TCGGTACTGG CGATGGAGCA CCCGTCCCTG GTCATCACCG ATCTCAAGAT GGATGAGATG GACGGTATGG CGCTGCTGGA CGCCATTCGC CGCGACTACC CGACGTTGCC CGTCATCATC CTTACCGCCC ACGGTTCCAT CCCCGATGCC CTGCTGGCCG CTGACCAGGG TGTCTTTGCC TTCCTCACCA AGCCTTTTGA TGGCAAGGAT CTGATGGCGC AGGTGGAGCG TGCCTTCAAC CTGACGGCGG CGGTTCCCCC TTCTTCGGGC AAGAAGGGCC GGGACTCCAG TTGGGACCGG ATCCTGACCC GCAGCCCCAA AATGCAGACG GTGCTGGATC AGGCGCGTCT GGTGGCGGCA TCCGATGCCA GCGTCTTCAT TCATGGCGCC AGTGGTACCG GTAAGGAACT GCTGGCCCAG GCCATCCATC AGGCGAGTCC GCGCCATGGC CACGCCTTTA TTGCCGTCAA CTGCGCGGCC TTTCCCGAGC AACTGCTGGA GTCGGAACTC TTCGGGCACA AAAAGGGCGC CTTCACCGGA GCGGCCAGCA GTCATCAGGG CCTGTTCCAG GCGGCGGAGG GCGGCACGCT TTTTCTGGAC GAAATTGGCG ATATGCCTCT CCCGTTACAG GTCAAACTGC TGCGCGCCCT GCAGGAACGG ATGATTCGTC CGGTCGGCGC CACCGAGAGC ATCGCCGTCG ACGTGCGGAT CATCTCCGCC AGTCACCGGG ATTTGGAGCA GGAGATGGCT GCCCGGCGTT TCCGGGATGA TCTCTACTAT CGCCTTTGCG TGGTGACCCT GGAACTTCCC GCCCTGGCGG AGCGCCCGGA GGATATCCCG CTGCTGGCCG AGTTTTTCCT GCGAGATGCG GCGGCCAAGA ATCGCAAGGA CGTTCGCGGG ATCGCGCCGG AAGCCATGGA ACTGCTCGTA TCGGCGCCCT GGCCGGGCAA TGTCCGGCAG CTCGCCAACG TCATCGAACA GGCGGTGGTG CTGTCCACTA CCCCGCGAAT CGGGGCGCCC CTCATCCGTC ATGCCTTGCG TGACCGGGAA GGGGAGGTCA TGCCTCTGGC CGATGCCAAG GGCCGTTTCG AGATGAATTA TCTGATCCAG ATCATGCGCA TGACCCGCGG CAACGTGAGT CAGGCCGCAC AACTCGCACA GCGCAACCGC ACCGAGTTTT ATCGCCTCCT GCACCGCTAC CACCTCGATC CCGCCGCCTT CAAGGAAGCC GGTGGTGAAG CGGAGGAGGA GTAG
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Protein sequence | MEKGRILLVD DDADLLRLLS LRMKAAGYVV STAASGSEAL SVLAMEHPSL VITDLKMDEM DGMALLDAIR RDYPTLPVII LTAHGSIPDA LLAADQGVFA FLTKPFDGKD LMAQVERAFN LTAAVPPSSG KKGRDSSWDR ILTRSPKMQT VLDQARLVAA SDASVFIHGA SGTGKELLAQ AIHQASPRHG HAFIAVNCAA FPEQLLESEL FGHKKGAFTG AASSHQGLFQ AAEGGTLFLD EIGDMPLPLQ VKLLRALQER MIRPVGATES IAVDVRIISA SHRDLEQEMA ARRFRDDLYY RLCVVTLELP ALAERPEDIP LLAEFFLRDA AAKNRKDVRG IAPEAMELLV SAPWPGNVRQ LANVIEQAVV LSTTPRIGAP LIRHALRDRE GEVMPLADAK GRFEMNYLIQ IMRMTRGNVS QAAQLAQRNR TEFYRLLHRY HLDPAAFKEA GGEAEEE
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