Gene Lferr_2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2568 
Symbol 
ID6878567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2539149 
End bp2540522 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content63% 
IMG OID642790425 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_002220969 
Protein GI198284648 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0491002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG GCAGAATCTT ACTCGTGGAT GATGACGCCG ATCTCCTGCG TCTGTTGTCC 
CTGCGCATGA AGGCGGCCGG CTATGTGGTC AGCACCGCGG CCAGCGGCAG CGAAGCGTTG
TCGGTACTGG CGATGGAGCA CCCGTCCCTG GTCATCACCG ATCTCAAGAT GGATGAGATG
GACGGTATGG CGCTGCTGGA CGCCATTCGC CGCGACTACC CGACGTTGCC CGTCATCATC
CTTACCGCCC ACGGTTCCAT CCCCGATGCC CTGCTGGCCG CTGACCAGGG TGTCTTTGCC
TTCCTCACCA AGCCTTTTGA TGGCAAGGAT CTGATGGCGC AGGTGGAGCG TGCCTTCAAC
CTGACGGCGG CGGTTCCCCC TTCTTCGGGC AAGAAGGGCC GGGACTCCAG TTGGGACCGG
ATCCTGACCC GCAGCCCCAA AATGCAGACG GTGCTGGATC AGGCGCGTCT GGTGGCGGCA
TCCGATGCCA GCGTCTTCAT TCATGGCGCC AGTGGTACCG GTAAGGAACT GCTGGCCCAG
GCCATCCATC AGGCGAGTCC GCGCCATGGC CACGCCTTTA TTGCCGTCAA CTGCGCGGCC
TTTCCCGAGC AACTGCTGGA GTCGGAACTC TTCGGGCACA AAAAGGGCGC CTTCACCGGA
GCGGCCAGCA GTCATCAGGG CCTGTTCCAG GCGGCGGAGG GCGGCACGCT TTTTCTGGAC
GAAATTGGCG ATATGCCTCT CCCGTTACAG GTCAAACTGC TGCGCGCCCT GCAGGAACGG
ATGATTCGTC CGGTCGGCGC CACCGAGAGC ATCGCCGTCG ACGTGCGGAT CATCTCCGCC
AGTCACCGGG ATTTGGAGCA GGAGATGGCT GCCCGGCGTT TCCGGGATGA TCTCTACTAT
CGCCTTTGCG TGGTGACCCT GGAACTTCCC GCCCTGGCGG AGCGCCCGGA GGATATCCCG
CTGCTGGCCG AGTTTTTCCT GCGAGATGCG GCGGCCAAGA ATCGCAAGGA CGTTCGCGGG
ATCGCGCCGG AAGCCATGGA ACTGCTCGTA TCGGCGCCCT GGCCGGGCAA TGTCCGGCAG
CTCGCCAACG TCATCGAACA GGCGGTGGTG CTGTCCACTA CCCCGCGAAT CGGGGCGCCC
CTCATCCGTC ATGCCTTGCG TGACCGGGAA GGGGAGGTCA TGCCTCTGGC CGATGCCAAG
GGCCGTTTCG AGATGAATTA TCTGATCCAG ATCATGCGCA TGACCCGCGG CAACGTGAGT
CAGGCCGCAC AACTCGCACA GCGCAACCGC ACCGAGTTTT ATCGCCTCCT GCACCGCTAC
CACCTCGATC CCGCCGCCTT CAAGGAAGCC GGTGGTGAAG CGGAGGAGGA GTAG
 
Protein sequence
MEKGRILLVD DDADLLRLLS LRMKAAGYVV STAASGSEAL SVLAMEHPSL VITDLKMDEM 
DGMALLDAIR RDYPTLPVII LTAHGSIPDA LLAADQGVFA FLTKPFDGKD LMAQVERAFN
LTAAVPPSSG KKGRDSSWDR ILTRSPKMQT VLDQARLVAA SDASVFIHGA SGTGKELLAQ
AIHQASPRHG HAFIAVNCAA FPEQLLESEL FGHKKGAFTG AASSHQGLFQ AAEGGTLFLD
EIGDMPLPLQ VKLLRALQER MIRPVGATES IAVDVRIISA SHRDLEQEMA ARRFRDDLYY
RLCVVTLELP ALAERPEDIP LLAEFFLRDA AAKNRKDVRG IAPEAMELLV SAPWPGNVRQ
LANVIEQAVV LSTTPRIGAP LIRHALRDRE GEVMPLADAK GRFEMNYLIQ IMRMTRGNVS
QAAQLAQRNR TEFYRLLHRY HLDPAAFKEA GGEAEEE