| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3788 |
|---|
| Symbol | |
|---|
| ID | 6966578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 3511952 |
|---|
| End bp | 3513286 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643387575 |
|---|
| Product | sigma-54 dependent response regulator |
|---|
| Protein accession | YP_002272028 |
|---|
| Protein GI | 209397901 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATA AACCTGCGCA TTTATTATTG GTCGATGACG ATCCGGGATT GCTGAAACTG
CTTGGCCTGC GCCTGACCAG CGAAGGCTAC AGCGTGGTCA CGGCGGAAAG TGGCGCTGAA
GGATTACGGG TACTGAATCG CGAAAAAGTA GATTTAGTCA TCAGCGACCT GCGGATGGAT
GAAATGGACG GTATGCAGCT GTTTGCTGAA ATCCAGAAAG TGCAGCCGGG AATGCCGGTA
ATTATTCTTA CCGCGCATGG TTCTATTCCC GATGCCGTTG CTGCAACACA GCAGGGCGTT
TTTAGTTTCC TCACCAAGCC TGTTGATAAA GACGCGCTAT ATCAGGCAAT TGATGATGCG
CTGGAACAAT CCGCGCCAGC CACCGACGAA CGCTGGCGCG AGGCGATTGT CACCCGCAGC
CCGCTGATGC TGCGTTTGCT GGAACAGGCG CGGCTGGTGG CGCAATCAGA CGTCAGCGTT
TTGATTAATG GCCAGAGCGG CACCGGGAAA GAGATTTTCG CCCAGGCTAT CCACAACGCC
AGCCCGCGCA ATAGCAAACC ATTTATTGCT ATTAACTGTG GTGCATTGCC TGAGCAATTG
CTGGAGTCGG AGCTGTTTGG TCATGCGCGT GGCGCGTTTA CTGGCGCTGT CAGCAATCGC
GAAGGTTTAT TCCAGGCGGC GGAAGGCGGA ACGCTATTTC TCGATGAGAT TGGCGATATG
CCTGCGCCGT TGCAGGTCAA ACTGTTGCGC GTGTTGCAGG AGCGTAAAGT GCGCCCGCTG
GGCAGTAACC GCGATATTGA TATCAATGTG CGGATTATTT CTGCCACTCA CCGTGATCTG
CCAAAAGCGA TGGCGCGCGG GGAATTCCGC GAAGATCTCT ATTACCGCCT CAACGTTGTC
AGCCTGAAAA TTCCGGCACT GGCGGAGCGC ACAGAAGACA TTCCGCTACT GGCAAATCAC
CTGTTGCGCC AGGCGGCAGA GCGACATAAA CCGTTTGTCC GCGCGTTTTC CACCGATGCG
ATGAAACGCC TGATGACCGC GAGCTGGCCG GGTAATGTGC GCCAGTTGGT CAACGTGATT
GAACAGTGCG TGGCGCTGAC CTCATCTCCG GTGATTAGCG ATGCATTAGT AGAGCAGGCG
CTGGAGGGTG AAAATACGGC GCTGCCAACC TTTGTTGAGG CACGTAATCA GTTTGAACTC
AACTATTTGC GTAAGCTGCT GCAAATTACC AAAGGCAACG TCACCCACGC GGCGAGAATG
GCGGGGCGCA ACCGGACAGA ATTTTATAAA CTGCTTTCCC GACACGAGCT GGATGCAAAC
GATTTCAAGG AATGA
|
|---|
| Protein sequence | MSHKPAHLLL VDDDPGLLKL LGLRLTSEGY SVVTAESGAE GLRVLNREKV DLVISDLRMD
EMDGMQLFAE IQKVQPGMPV IILTAHGSIP DAVAATQQGV FSFLTKPVDK DALYQAIDDA
LEQSAPATDE RWREAIVTRS PLMLRLLEQA RLVAQSDVSV LINGQSGTGK EIFAQAIHNA
SPRNSKPFIA INCGALPEQL LESELFGHAR GAFTGAVSNR EGLFQAAEGG TLFLDEIGDM
PAPLQVKLLR VLQERKVRPL GSNRDIDINV RIISATHRDL PKAMARGEFR EDLYYRLNVV
SLKIPALAER TEDIPLLANH LLRQAAERHK PFVRAFSTDA MKRLMTASWP GNVRQLVNVI
EQCVALTSSP VISDALVEQA LEGENTALPT FVEARNQFEL NYLRKLLQIT KGNVTHAARM
AGRNRTEFYK LLSRHELDAN DFKE
|
|---|
| |