Gene ECH74115_3788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3788 
Symbol 
ID6966578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3511952 
End bp3513286 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content54% 
IMG OID643387575 
Productsigma-54 dependent response regulator 
Protein accessionYP_002272028 
Protein GI209397901 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATA AACCTGCGCA TTTATTATTG GTCGATGACG ATCCGGGATT GCTGAAACTG 
CTTGGCCTGC GCCTGACCAG CGAAGGCTAC AGCGTGGTCA CGGCGGAAAG TGGCGCTGAA
GGATTACGGG TACTGAATCG CGAAAAAGTA GATTTAGTCA TCAGCGACCT GCGGATGGAT
GAAATGGACG GTATGCAGCT GTTTGCTGAA ATCCAGAAAG TGCAGCCGGG AATGCCGGTA
ATTATTCTTA CCGCGCATGG TTCTATTCCC GATGCCGTTG CTGCAACACA GCAGGGCGTT
TTTAGTTTCC TCACCAAGCC TGTTGATAAA GACGCGCTAT ATCAGGCAAT TGATGATGCG
CTGGAACAAT CCGCGCCAGC CACCGACGAA CGCTGGCGCG AGGCGATTGT CACCCGCAGC
CCGCTGATGC TGCGTTTGCT GGAACAGGCG CGGCTGGTGG CGCAATCAGA CGTCAGCGTT
TTGATTAATG GCCAGAGCGG CACCGGGAAA GAGATTTTCG CCCAGGCTAT CCACAACGCC
AGCCCGCGCA ATAGCAAACC ATTTATTGCT ATTAACTGTG GTGCATTGCC TGAGCAATTG
CTGGAGTCGG AGCTGTTTGG TCATGCGCGT GGCGCGTTTA CTGGCGCTGT CAGCAATCGC
GAAGGTTTAT TCCAGGCGGC GGAAGGCGGA ACGCTATTTC TCGATGAGAT TGGCGATATG
CCTGCGCCGT TGCAGGTCAA ACTGTTGCGC GTGTTGCAGG AGCGTAAAGT GCGCCCGCTG
GGCAGTAACC GCGATATTGA TATCAATGTG CGGATTATTT CTGCCACTCA CCGTGATCTG
CCAAAAGCGA TGGCGCGCGG GGAATTCCGC GAAGATCTCT ATTACCGCCT CAACGTTGTC
AGCCTGAAAA TTCCGGCACT GGCGGAGCGC ACAGAAGACA TTCCGCTACT GGCAAATCAC
CTGTTGCGCC AGGCGGCAGA GCGACATAAA CCGTTTGTCC GCGCGTTTTC CACCGATGCG
ATGAAACGCC TGATGACCGC GAGCTGGCCG GGTAATGTGC GCCAGTTGGT CAACGTGATT
GAACAGTGCG TGGCGCTGAC CTCATCTCCG GTGATTAGCG ATGCATTAGT AGAGCAGGCG
CTGGAGGGTG AAAATACGGC GCTGCCAACC TTTGTTGAGG CACGTAATCA GTTTGAACTC
AACTATTTGC GTAAGCTGCT GCAAATTACC AAAGGCAACG TCACCCACGC GGCGAGAATG
GCGGGGCGCA ACCGGACAGA ATTTTATAAA CTGCTTTCCC GACACGAGCT GGATGCAAAC
GATTTCAAGG AATGA
 
Protein sequence
MSHKPAHLLL VDDDPGLLKL LGLRLTSEGY SVVTAESGAE GLRVLNREKV DLVISDLRMD 
EMDGMQLFAE IQKVQPGMPV IILTAHGSIP DAVAATQQGV FSFLTKPVDK DALYQAIDDA
LEQSAPATDE RWREAIVTRS PLMLRLLEQA RLVAQSDVSV LINGQSGTGK EIFAQAIHNA
SPRNSKPFIA INCGALPEQL LESELFGHAR GAFTGAVSNR EGLFQAAEGG TLFLDEIGDM
PAPLQVKLLR VLQERKVRPL GSNRDIDINV RIISATHRDL PKAMARGEFR EDLYYRLNVV
SLKIPALAER TEDIPLLANH LLRQAAERHK PFVRAFSTDA MKRLMTASWP GNVRQLVNVI
EQCVALTSSP VISDALVEQA LEGENTALPT FVEARNQFEL NYLRKLLQIT KGNVTHAARM
AGRNRTEFYK LLSRHELDAN DFKE