| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0970 |
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| Symbol | |
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| ID | 8418792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1144970 |
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| End bp | 1146391 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037539 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003197836 |
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| Protein GI | 258405094 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0157817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000223455 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGAGA CGGCAGAGGC TCCTGTATTC GATATACTGA TAGTCGACGA TGAACAGGAT
TTTGCCGTGG GCCTGAAGCG GATTCTCGAA CGGGCCTTTC CCGACTGCAC CTGTCTTGTC
GCCCATGACG GGGAGCAGGC CCTTGCTCAC CTTTCCCAGC GCCGCATCGG GGTTATGCTC
ACTGATCTGC GCATGCCGGG TATGGATGGG ATGACGCTTT TGCCCAAGGC TCTGGACATC
GATCCCTTGG TCAGCGTTGT GCTGCTCACG GCATATGGCA GCATCGAACG CGCTGTCGAG
GCCCTCAAAG TGGGCGCCTA CGACTTTTTG ACCAAGCCCG TAGATTATCA GGACCTGCAG
CGGGTGGTGG AAAAAGCACT CGAGCGCAGC CGGTTGCTGT GGGAAAATCA CCGGTTGCGG
GAGAAGGTCG GCTCCGGCGC ATCCGGGTCC CGCCTGGTCG GGGAATCCGC GGCCATGACT
CGTTTGAAAG ACCACCTGGA GATGGTCGCG GCCACGGACT ACACGGTGCT CGTTCTCGGT
GAATCCGGAA CCGGCAAGGA ATTGGTGGCC CGGACAGTCC ACGAGATGAG TCCCCGAGCC
AACCAGCCGT GGCTGACTGT GAACTGCCCG GCGATCCCGG ATCAACTCCT GGAAAGTGAA
TTGTTCGGCC ATGTCCAGGG GGCGTTTACC GGGGCCAACC GGGAGCACAA AGGGGTTTTT
CTGACAGCAG ACAAGGGAAC CTTGTTGCTC GATGAAATCG GAGACATTAC TCCGGACATC
CAGACCAAAC TCTTGCGCGT CTTACAGGAG CAGGAGATCC GCCAAGTCGG GGCGAGCAAG
AGCGTGTCCA TTGATGTGCG CATAGTGGCG ACCACGAATC AGGATCTGGA AGACAAGATC
CAGGACGGTA GTTTTCGCGA AGACCTTTTT TACCGTCTCA ATGTCCTCAC CGTCCGAGTG
CCGCCCCTGC GGGAGCGCAA GGAAGACATC CCCCTTCTGG CCCACGCCTT TGTCCGCCAG
ACCTGCCAGG AAATGGGCAC GGATCCCAAG GAGATCCGTC CGGAGGCGAT GTCGCTTCTC
AGTGCCCGGA ACTGGCCCGG CAATGTCCGC GAATTGCAGA ATTTTATGCG TAAGCTGGTC
GTCTTTTCCG GACAGGGGCC GGTAGACCAC CATGTGGTGC GCATCGTGGA CGGCGGCAAC
AGTCAAAGCC CGGAGGAGCA AAGGATTTTG CCCTACAAGG AAGCCAAATC CCAGGTCGTG
GACGATTTCA CCCGTTCCTA TGTCCAGGCG GTGCTCCGGG AGACCGAGGG CAATGTGTCC
GAGGCCGCCC GACTAAGCGG TCTGGAACGG GTTTCATTAC AAAAGATTCT GCGGCGGCTG
GATATCCAGG CCAAGGATTT CCGGCAGCCC TCATCGTCGT GA
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| Protein sequence | MSETAEAPVF DILIVDDEQD FAVGLKRILE RAFPDCTCLV AHDGEQALAH LSQRRIGVML
TDLRMPGMDG MTLLPKALDI DPLVSVVLLT AYGSIERAVE ALKVGAYDFL TKPVDYQDLQ
RVVEKALERS RLLWENHRLR EKVGSGASGS RLVGESAAMT RLKDHLEMVA ATDYTVLVLG
ESGTGKELVA RTVHEMSPRA NQPWLTVNCP AIPDQLLESE LFGHVQGAFT GANREHKGVF
LTADKGTLLL DEIGDITPDI QTKLLRVLQE QEIRQVGASK SVSIDVRIVA TTNQDLEDKI
QDGSFREDLF YRLNVLTVRV PPLRERKEDI PLLAHAFVRQ TCQEMGTDPK EIRPEAMSLL
SARNWPGNVR ELQNFMRKLV VFSGQGPVDH HVVRIVDGGN SQSPEEQRIL PYKEAKSQVV
DDFTRSYVQA VLRETEGNVS EAARLSGLER VSLQKILRRL DIQAKDFRQP SSS
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