| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2653 |
|---|
| Symbol | |
|---|
| ID | 8378337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 3038573 |
|---|
| End bp | 3040021 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645001879 |
|---|
| Product | putative two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_003159146 |
|---|
| Protein GI | 256830418 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGG ATGTCATAGG TTCGCCCCGC ACTGTCGCTG GGGCCCGGGT CGTCATTGTC
GACGATGAGG TGGATTTCGC GCGTGGTCTG GCCAGACTTG TCGGCGGACA TTTTCCTGAC
CTGGACGTGG TGGCCGTGCA CAGCGCAAAA GAAGCCCTCC TCGCCCTGTC CGCCAAATCG
GCGCAGCTCA TGATCACGGA TTTGCGCATG CCTGAAATGA CCGGGCTGCA GCTTCTGTCC
CAGGCGCTCG GCCTGCAGCC GGATCTGAGC ATGGTCGTGC TCACGGCCTA TGGAACCATC
GAGACCGCGG TGGAGGCCCT GAGGGCCGGG GCCTATGATT TTCTGACCAA GCCCATCGAG
CCGGAACAGC TTTTTCGCGT GGTGGAGAAA GGACTGGAGC GGAGCAGGCT GCTCGAAGAA
AACAATCGTC TGCGTCAGAT CCTGGCCAGC AAGGAATGCG GCGGGGAGCT GGTCGGGGAA
GGCGCGGCCA TGCGGCAACT CAAGCGCACC ATCGCGGCCG TGGCCCAGTC CGAGTACACG
GTGCTGGTCA GGGGCGAATC GGGCACCGGC AAGGAGCTGG TGGCCCGCAT GGTGCATCAT
CTTGGCGTGC GCGCTTCCCG GCCCTTTCTG GCGGTGAACT GTCCGTCCAT TCCCGAAAAC
CTGCTGGAGA GCGAACTCTT CGGTCACGTC AAGGGCGCCT TCACCGGGGC CGACCGTGAC
CACAAGGGCC TTTTCGCGGC GGCCGACAAG GGCACCATCC ATCTGGACGA AATCGGTGAT
ATTTCCCCGG CAGTGCAGAC CAAGCTGCTG CGGGTCATGC AGGACGGGGA GGTTCGGCCC
GTCGGCTCGA ACAAGTCTTT GCGGGTGAAT GTGCGCGTGG TCGCTTCCAC CAACCAGGAT
CTCGAAGCCC TCATGCAGGC CAAGACCTTT CGCGAAGACC TGTACTATCG TCTGAATGTA
TTGACCGTCA CCCTGCCGCC CCTGCGCGAA AGGGCCGAGG ACATCCCCCT GCTGGCCGGG
CATTTTTTCC GGGCGGCCTG CCGCGAAATG GGGCTGGCCG AAAAAGAGGT CGACCCCGAG
GTCATGCACT GGATGGCCGC CCACCCCTGG CCCGGCAACG TGCGCGAGTT GCAGAATTTC
GTGCGCCGGC TGACCGTCTT TGCCACCACG GAGCGGGTGG ACATGAATCT GCTGCGCATG
GTGCAGCAGG GCGGATGCCT GCCCGTGCCC ATGGGAGGGG ACATGAACGG CGGCGGGACT
GCGCTTGGGC CGTACAAGGT TGCCAAGGCC GAGGCGGTGG CGGTCTTCAC CCAATCCTAC
GTAAATGAAC TCCTGGCCCA GACCAAGGGC AACGTGTCCG AAGCCGCCCG CGTCTCAGGC
CTGTCCCGCG TGGCCGTGCA GAAAATCCTC TCGCGCATGG GCGAAAGCGC GGCGCGATTT
CGGGACTGA
|
|---|
| Protein sequence | MSMDVIGSPR TVAGARVVIV DDEVDFARGL ARLVGGHFPD LDVVAVHSAK EALLALSAKS
AQLMITDLRM PEMTGLQLLS QALGLQPDLS MVVLTAYGTI ETAVEALRAG AYDFLTKPIE
PEQLFRVVEK GLERSRLLEE NNRLRQILAS KECGGELVGE GAAMRQLKRT IAAVAQSEYT
VLVRGESGTG KELVARMVHH LGVRASRPFL AVNCPSIPEN LLESELFGHV KGAFTGADRD
HKGLFAAADK GTIHLDEIGD ISPAVQTKLL RVMQDGEVRP VGSNKSLRVN VRVVASTNQD
LEALMQAKTF REDLYYRLNV LTVTLPPLRE RAEDIPLLAG HFFRAACREM GLAEKEVDPE
VMHWMAAHPW PGNVRELQNF VRRLTVFATT ERVDMNLLRM VQQGGCLPVP MGGDMNGGGT
ALGPYKVAKA EAVAVFTQSY VNELLAQTKG NVSEAARVSG LSRVAVQKIL SRMGESAARF
RD
|
|---|
| |