Gene MCA1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1713 
Symbol 
ID3102781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1828656 
End bp1830038 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content63% 
IMG OID637170874 
Productsigma-54 dependent DNA-binding response regulator 
Protein accessionYP_114152 
Protein GI53803974 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.91858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAG CGCGCAAGCG AGTGTTGCTG GTGGACGACG ATCCCGACCT GTTGCGTCTG 
ATCGGGCTGC GCCTGACCGC GGCGGGGTTC GATGTGGCGA AAGCGGCGAA CGGCCAGTCG
GCACTGTCGC AGGTAGTGGT CTTCCGGCCC CATGTCGTCG TCACCGATCT GAGGATGGAC
GGTATGGACG GCATGGCATT GTTCGACGCC TTGAACGAAC GCCATCCCAC CTTGCCAGTG
ATCATCATGA CGGCACACGG TACCATCAAC GACGCAGTCG CGGCGACCCG GCGGGGCGTA
TTCGGATTCG TCACCAAGCC GGTGGACAAG AACGAACTGA TTGAGCACAT CTCCGAAGCG
ATCCGCATCA ACGGAAACAC GACCGTCATT CCCGACAAGG AGGAGTGGCG CGCCCGGATC
GTCACCCAGA GCCCTTTGAT GGAAGAGGTC CTGGGGCAGG CCCAGCGTGT GGCCCAGAAC
CGGGCCAGCG TGTTCATCGG TGGTGAAAGC GGTACCGGCA AGGAACTGCT GGCTCGGGCC
ATTCACGACC TCAGTCCTCG TGCCAAGGGG CCGTTCGTGG CGGTCAATTG CAGCGCCATC
CCGGAAAATC TGCTCGAGTC CGAGCTGTTC GGTTACCGCA AGGGGGCGTT CACCGGGGCG
ACGCGGGACC ACCAGGGCCT GTTCAAAGCG GCCGACGGTG GCACGCTGTT CCTGGATGAA
GTCGGTGACA TGCCACGATC CTTTCAGGTG AAACTGTTGC GCGCCCTTCA GGAGATGAAG
GTGCGTCCCG TCGGAGCGAC CCATGACGAG CCGGTCGACG TCCGGGTGAT CTCGGCCACC
CATGTCGACC TTGAACAGGC GATGGCGGAG GGGAACTTCC GCGAGGATCT GTATTACCGC
CTCAACGTCG TGACCCTGCT GTTGCCGCCC CTGGTCAAAC GTCCCGAGGA CATTCCCTTG
CTGGCCATGC ATTTTCTTCG GGAGCTGGTG AGTTCGTACG GCGACCAGGT CAAGGGCTTC
TCTCCGGAGG CGATGGAGGC GCTGGTGAAT TTTCAGTGGC CCGGCAACGT CCGGCAACTG
CGCAACGTGG TGGAACAGTG CGTGGCGCTG TCGACCACGC CACTGATCCC CGTGACCCTG
GTGCAACGTG CTTTGCGGGA GGCGCCGTCG TCTTTCCCTT CGTTGCAGGA AGCCAGGGAC
CAGTTCGAAC TCAACTACCT CATCCGCCTA TTGCAGATGA CCCGAGGGAA CGTGACCCAG
GCCGCCCGTC TGGCTAAGCG CAACCGTACC GAGTTTTACC GGCTCCTGAG CCGGCATGGC
ATGAATCCGG CGATGTTCAA GGGAGGCGGA GATGCCGCCG GCGATGCGCA GCCGCCTTCG
TGA
 
Protein sequence
MSEARKRVLL VDDDPDLLRL IGLRLTAAGF DVAKAANGQS ALSQVVVFRP HVVVTDLRMD 
GMDGMALFDA LNERHPTLPV IIMTAHGTIN DAVAATRRGV FGFVTKPVDK NELIEHISEA
IRINGNTTVI PDKEEWRARI VTQSPLMEEV LGQAQRVAQN RASVFIGGES GTGKELLARA
IHDLSPRAKG PFVAVNCSAI PENLLESELF GYRKGAFTGA TRDHQGLFKA ADGGTLFLDE
VGDMPRSFQV KLLRALQEMK VRPVGATHDE PVDVRVISAT HVDLEQAMAE GNFREDLYYR
LNVVTLLLPP LVKRPEDIPL LAMHFLRELV SSYGDQVKGF SPEAMEALVN FQWPGNVRQL
RNVVEQCVAL STTPLIPVTL VQRALREAPS SFPSLQEARD QFELNYLIRL LQMTRGNVTQ
AARLAKRNRT EFYRLLSRHG MNPAMFKGGG DAAGDAQPPS