Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1713 |
Symbol | |
ID | 3102781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1828656 |
End bp | 1830038 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637170874 |
Product | sigma-54 dependent DNA-binding response regulator |
Protein accession | YP_114152 |
Protein GI | 53803974 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.91858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAG CGCGCAAGCG AGTGTTGCTG GTGGACGACG ATCCCGACCT GTTGCGTCTG ATCGGGCTGC GCCTGACCGC GGCGGGGTTC GATGTGGCGA AAGCGGCGAA CGGCCAGTCG GCACTGTCGC AGGTAGTGGT CTTCCGGCCC CATGTCGTCG TCACCGATCT GAGGATGGAC GGTATGGACG GCATGGCATT GTTCGACGCC TTGAACGAAC GCCATCCCAC CTTGCCAGTG ATCATCATGA CGGCACACGG TACCATCAAC GACGCAGTCG CGGCGACCCG GCGGGGCGTA TTCGGATTCG TCACCAAGCC GGTGGACAAG AACGAACTGA TTGAGCACAT CTCCGAAGCG ATCCGCATCA ACGGAAACAC GACCGTCATT CCCGACAAGG AGGAGTGGCG CGCCCGGATC GTCACCCAGA GCCCTTTGAT GGAAGAGGTC CTGGGGCAGG CCCAGCGTGT GGCCCAGAAC CGGGCCAGCG TGTTCATCGG TGGTGAAAGC GGTACCGGCA AGGAACTGCT GGCTCGGGCC ATTCACGACC TCAGTCCTCG TGCCAAGGGG CCGTTCGTGG CGGTCAATTG CAGCGCCATC CCGGAAAATC TGCTCGAGTC CGAGCTGTTC GGTTACCGCA AGGGGGCGTT CACCGGGGCG ACGCGGGACC ACCAGGGCCT GTTCAAAGCG GCCGACGGTG GCACGCTGTT CCTGGATGAA GTCGGTGACA TGCCACGATC CTTTCAGGTG AAACTGTTGC GCGCCCTTCA GGAGATGAAG GTGCGTCCCG TCGGAGCGAC CCATGACGAG CCGGTCGACG TCCGGGTGAT CTCGGCCACC CATGTCGACC TTGAACAGGC GATGGCGGAG GGGAACTTCC GCGAGGATCT GTATTACCGC CTCAACGTCG TGACCCTGCT GTTGCCGCCC CTGGTCAAAC GTCCCGAGGA CATTCCCTTG CTGGCCATGC ATTTTCTTCG GGAGCTGGTG AGTTCGTACG GCGACCAGGT CAAGGGCTTC TCTCCGGAGG CGATGGAGGC GCTGGTGAAT TTTCAGTGGC CCGGCAACGT CCGGCAACTG CGCAACGTGG TGGAACAGTG CGTGGCGCTG TCGACCACGC CACTGATCCC CGTGACCCTG GTGCAACGTG CTTTGCGGGA GGCGCCGTCG TCTTTCCCTT CGTTGCAGGA AGCCAGGGAC CAGTTCGAAC TCAACTACCT CATCCGCCTA TTGCAGATGA CCCGAGGGAA CGTGACCCAG GCCGCCCGTC TGGCTAAGCG CAACCGTACC GAGTTTTACC GGCTCCTGAG CCGGCATGGC ATGAATCCGG CGATGTTCAA GGGAGGCGGA GATGCCGCCG GCGATGCGCA GCCGCCTTCG TGA
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Protein sequence | MSEARKRVLL VDDDPDLLRL IGLRLTAAGF DVAKAANGQS ALSQVVVFRP HVVVTDLRMD GMDGMALFDA LNERHPTLPV IIMTAHGTIN DAVAATRRGV FGFVTKPVDK NELIEHISEA IRINGNTTVI PDKEEWRARI VTQSPLMEEV LGQAQRVAQN RASVFIGGES GTGKELLARA IHDLSPRAKG PFVAVNCSAI PENLLESELF GYRKGAFTGA TRDHQGLFKA ADGGTLFLDE VGDMPRSFQV KLLRALQEMK VRPVGATHDE PVDVRVISAT HVDLEQAMAE GNFREDLYYR LNVVTLLLPP LVKRPEDIPL LAMHFLRELV SSYGDQVKGF SPEAMEALVN FQWPGNVRQL RNVVEQCVAL STTPLIPVTL VQRALREAPS SFPSLQEARD QFELNYLIRL LQMTRGNVTQ AARLAKRNRT EFYRLLSRHG MNPAMFKGGG DAAGDAQPPS
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