| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1524 |
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| Symbol | |
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| ID | 3971960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1660324 |
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| End bp | 1662885 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924639 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_531405 |
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| Protein GI | 90423035 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.334346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG ACGCCAACGA CGATCCGCCC GGCGATTCCT TGACCAACCC CGAGCCGCCG
CGGCGCAGCG GTAGCATCGT GTTGGTGTTG CTGATCGCCG CCGCCATCGT CGCCGCCGCG
GTGGCGTTCA TGACGCTCGG CCGCGCCGCC GCGCAGCCCT ATATCATGGG CTCGCTGGCG
CTGCTGGCGA TGGTCGGGCT GTTCACGCTG TTTGCGTTTG CCGCCGGCAT CGTCCGTTTC
GCCGATCGGA TGGCGGACGA TCCGGTGATG CGGCCGATGG CGGACCACGC CTTCGACGGG
CTGGCGGTGA CCGATCCGCG CGGCCACGTG GTCTATGCCA ACCACAATTA CCTCACCCAG
ACCGGGGCGG CGACGCTGCA GGACGTCCGC CCTGTGGAGC GGGTGTTCAT CGGCAATCCC
GACGTCTCCG AGGCGGTGTT CCGGCTGTTG AAGGCGGCCC GCGAGGCCAA GCGCCACACC
GAGGAGGTGC GGGTCGCGGG AAGCGAGGGC GCGCCGGGGC GCTGGCTGCG GATGCGGGTG
CGCCCGCTCG GGCTCTCCAA GCGCGAGGCG AAATTCACGG TGTGGTCGCT GGCCGACATC
ACCCGCGACC GCGAGCGCCA GGAAGACGTG TTTCAGGAAT TGCAGCACGC CATCGAATAT
CTCGACCACG CCCCGGCCGG GTTCTTCTCG GTCGATGCCG CGGGCGACCT CGTCTATGTC
AACGCCACGC TGGCGGATTG GCTCGGCCAT GATCTGGCGG AAATCGGCTC CGGAGGGCTG
AAGCTCAACG ACATCATGTC GGGCGACGGC GCCTCGCTGC TGACCTCGAT TTCGGCGCTG
CCGGGCGAAG TCAAAACCGA AGTGTTCGAC GTCGACCTGC GGATGCGCAA CGGCAAGACC
ATGCCGGCGC GGCTGTTCCA CAAGTTGGCG TTCGGCGCCG ACGGCAAGCC CGGCGCCTCG
CGCACCCTGG TGATCAGCCG GGCGCGCGAC GAGCGCGCCG ATCCGCAGCG CACCGCCGAA
GTGCGTTTCA TGCGGTTCTT CGACCATACT CCGATGGCGA TCGCCACCGT CGACAAGACC
GGCGCGGTGG TGCGCGGCAA TGCCCGCTTC GCCAAGCTGG CGCAGAGCCT CAATCCCGGC
GGCGCCGTCA ACAAGTCGGT GCTGGCCGCG GTCAGCGACC GCGAGCGCGG CCAACTTTCG
GATGCGATCG ACCTCGCCGC GCAAGGCCAG GGCGACATCC CGCCGGTCGA GGCGATGCTC
GACAGCACCC GCGAGCGCTG GGCGCAGTTC TTCGTCACCG CGATCGAGGA GGACGAGCGC
GATACCGAAG CCGCGATCGT CTACATGCTG GAGACCACCG AGCGCCGCAC GCTGGAAAAC
CAGATCAACC AGTCGCAGAA GATGGACATG GTCGGCCAGC TCGCCGGCGG CATCGCGCAC
GATTTCAACA ATGTGCTGTC CGCCATCATG ATGGCCAACG ACTTCCTGCT GAACGCCCAC
AAGCCGACCG ATCCGTCGTT CCAGGACATC ATGCAGATCA AGCAGAACGC CACGCGGGCT
GCGACCCTGG TGCGGCAGCT CTTGGCGTTC TCGCGCCGTC AGACGCTGCG GCCGCAGGTG
CTGCATCTCG GCGACGCGCT CAGCGATTTG ACCATGCTGC TGCGCCGGCT GATCGGCGAG
AAGGTCAAGC TCGACCTGGT GCACGGCCGC GACCTGTGGC CGGTCAAGGT CGACGTCTCG
CAATTCGAAC AGGTGATCGT CAATCTGGCG GTCAACGCCC GCGACGCCAT GCCGGCCGGC
GGCAAGCTCA CGGTGCGCAC CGCCAACGTC TCGGCGCAGG AGGCCGAGCG GCTGTCCTAC
AAGGGGATGC CGCCCGCCGA TTACGTGCGG ATCGACGTCA GCGACACCGG CACCGGCATT
CCCGCCGAGA TCGTCGACAA GATCTTCGAG CCGTTCTTCT CCACCAAGGA AGTCGGCAAG
GGCACCGGGC TTGGGCTGTC GACGGTGTAC GGCATCGTCA AACAGACCGG CGGCTTCATC
TATGTCGCCT CCGAAGCCGA CAAGGGCACC ACCTTCCACA TCTTCCTGCC GCGCTACAAT
GCCGACCGCG ACGTGCAGCC GGAGCCGGCC GCCGTCGCCG CCGCCGCCGT GGTGGAGCCC
AAGCCGGAAG CCAAGCCGCG CGCCGCCGAT CTCACCGGGC AGGGCACCAT CCTGCTGGTC
GAGGACGAGG AGGGGCTGCG CTCGCTGAAC GCCCGCGGCC TGCGCTCGCG CGGCTACAGC
GTGATCGAGG CCGGCAACGG GCTCGAGGCG ATCGACGCCA TCGAGGCGCA GCACGGCGCC
ATCGACCTCG TGGTGTCCGA CGTGGTGATG CCGGAAATGG ACGGCCCGAC GCTGCTCAAG
GAAATGCGCA CCCGCAATCC GGACCTCAAG ATCATCTTCG TCTCCGGCTA TGCGGAGGAT
GCGTTCGAAA AGAGCCTGCC GGAAAACCAG CAATTCGCCT TCCTGCCGAA GCCGTTCACG
CTGAGCCAGC TGGTGGCGGC GGTGAAGGAG ACGATGGCGT GA
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| Protein sequence | MTSDANDDPP GDSLTNPEPP RRSGSIVLVL LIAAAIVAAA VAFMTLGRAA AQPYIMGSLA
LLAMVGLFTL FAFAAGIVRF ADRMADDPVM RPMADHAFDG LAVTDPRGHV VYANHNYLTQ
TGAATLQDVR PVERVFIGNP DVSEAVFRLL KAAREAKRHT EEVRVAGSEG APGRWLRMRV
RPLGLSKREA KFTVWSLADI TRDRERQEDV FQELQHAIEY LDHAPAGFFS VDAAGDLVYV
NATLADWLGH DLAEIGSGGL KLNDIMSGDG ASLLTSISAL PGEVKTEVFD VDLRMRNGKT
MPARLFHKLA FGADGKPGAS RTLVISRARD ERADPQRTAE VRFMRFFDHT PMAIATVDKT
GAVVRGNARF AKLAQSLNPG GAVNKSVLAA VSDRERGQLS DAIDLAAQGQ GDIPPVEAML
DSTRERWAQF FVTAIEEDER DTEAAIVYML ETTERRTLEN QINQSQKMDM VGQLAGGIAH
DFNNVLSAIM MANDFLLNAH KPTDPSFQDI MQIKQNATRA ATLVRQLLAF SRRQTLRPQV
LHLGDALSDL TMLLRRLIGE KVKLDLVHGR DLWPVKVDVS QFEQVIVNLA VNARDAMPAG
GKLTVRTANV SAQEAERLSY KGMPPADYVR IDVSDTGTGI PAEIVDKIFE PFFSTKEVGK
GTGLGLSTVY GIVKQTGGFI YVASEADKGT TFHIFLPRYN ADRDVQPEPA AVAAAAVVEP
KPEAKPRAAD LTGQGTILLV EDEEGLRSLN ARGLRSRGYS VIEAGNGLEA IDAIEAQHGA
IDLVVSDVVM PEMDGPTLLK EMRTRNPDLK IIFVSGYAED AFEKSLPENQ QFAFLPKPFT
LSQLVAAVKE TMA
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