More than 300 homologs were found in PanDaTox collection
for query gene Phep_1952 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013061  Phep_1952  response regulator receiver  100 
 
 		 127 aa  252  1.0000000000000001e-66  Pedobacter heparinus DSM 2366  Bacteria  normal  0.121981  hitchhiker  0.00128473 
 
 
-
 
NC_013037  Dfer_0161  response regulator receiver protein  42.02 
 
 		 129 aa  104  3e-22  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.433786 
 
 
-
 
NC_013132  Cpin_3706  response regulator receiver protein  39.67 
 
 		 143 aa  91.3  4e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.322274  normal  0.186621 
 
 
-
 
NC_013730  Slin_1028  response regulator receiver protein  40.52 
 
 		 141 aa  89.4  1e-17  Spirosoma linguale DSM 74  Bacteria  normal  0.24862  normal  1 
 
 
-
 
NC_013730  Slin_3850  response regulator receiver protein  36.21 
 
 		 158 aa  84  6e-16  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_2946  response regulator receiver modulated serine phosphatase  33.6 
 
 		 384 aa  78.2  0.00000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011059  Paes_1429  response regulator receiver protein  35.9 
 
 		 122 aa  78.2  0.00000000000003  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.275463 
 
 
-
 
NC_010003  Pmob_0875  two component transcriptional regulator  40.98 
 
 		 242 aa  78.2  0.00000000000004  Petrotoga mobilis SJ95  Bacteria  decreased coverage  0.000486966  n/a   
 
 
-
 
NC_007298  Daro_3813  PAS/PAC sensor hybrid histidine kinase  33.33 
 
 		 963 aa  76.3  0.0000000000001  Dechloromonas aromatica RCB  Bacteria  decreased coverage  0.000539796  normal  0.0501343 
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  35.65 
 
 		 308 aa  75.9  0.0000000000002  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007604  Synpcc7942_2416  two component transcriptional regulator  36.07 
 
 		 255 aa  75.9  0.0000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.0279623 
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  35 
 
 		 353 aa  75.9  0.0000000000002  Magnetococcus sp. MC-1  Bacteria  normal  1  hitchhiker  0.000480818 
 
 
-
 
NC_011146  Gbem_0378  response regulator receiver protein  40.17 
 
 		 204 aa  75.1  0.0000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  35.43 
 
 		 331 aa  75.1  0.0000000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  36.97 
 
 		 231 aa  75.1  0.0000000000003  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0605  adenylate/guanylate cyclase  37.17 
 
 		 355 aa  74.7  0.0000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.657653  n/a   
 
 
-
 
NC_007484  Noc_2401  phosphate regulon transcriptional regulatory protein phoB  38.46 
 
 		 229 aa  73.9  0.0000000000006  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1208  phosphate regulon response regulator PhoB  38.66 
 
 		 233 aa  73.9  0.0000000000007  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  32.54 
 
 		 365 aa  73.6  0.0000000000009  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_1878  two component transcriptional regulator  36.22 
 
 		 242 aa  73.2  0.000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.559477 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  34.13 
 
 		 365 aa  73.6  0.000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0748941 
 
 
-
 
NC_009972  Haur_0447  two component transcriptional regulator  34.19 
 
 		 229 aa  72.8  0.000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000245325  n/a   
 
 
-
 
NC_014165  Tbis_3276  winged helix family two component transcriptional regulator  38.1 
 
 		 234 aa  72  0.000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.208422  normal  0.192837 
 
 
-
 
NC_007955  Mbur_2185  response regulator receiver  36.44 
 
 		 356 aa  72.4  0.000000000002  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  32.14 
 
 		 308 aa  72.4  0.000000000002  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0360  response regulator receiver protein  38.46 
 
 		 204 aa  72  0.000000000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000726536 
 
 
-
 
NC_013757  Gobs_4657  two component transcriptional regulator, winged helix family  39.05 
 
 		 240 aa  71.6  0.000000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_2712  response regulator receiver sensor signal transduction histidine kinase  36.75 
 
 		 414 aa  71.6  0.000000000003  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007955  Mbur_0825  response regulator receiver  35.04 
 
 		 204 aa  71.6  0.000000000003  Methanococcoides burtonii DSM 6242  Archaea  normal  0.751719  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  33.6 
 
 		 331 aa  72  0.000000000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  33.33 
 
 		 367 aa  72  0.000000000003  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  31.62 
 
 		 377 aa  71.2  0.000000000004  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_013161  Cyan8802_2353  two component transcriptional regulator, winged helix family  35.77 
 
 		 243 aa  70.9  0.000000000005  Cyanothece sp. PCC 8802  Bacteria  normal  0.0794558  normal  1 
 
 
-
 
NC_009976  P9211_01481  two-component response regulator  33.86 
 
 		 248 aa  70.9  0.000000000005  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011726  PCC8801_2302  two component transcriptional regulator, winged helix family  35.77 
 
 		 243 aa  70.9  0.000000000005  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010524  Lcho_3702  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  34.48 
 
 		 863 aa  71.2  0.000000000005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.170309 
 
 
-
 
NC_007516  Syncc9605_2384  two component transcriptional regulator  33.86 
 
 		 259 aa  71.2  0.000000000005  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  34.71 
 
 		 239 aa  71.2  0.000000000005  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009972  Haur_4036  two component transcriptional regulator  30.71 
 
 		 248 aa  71.2  0.000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  34.71 
 
 		 239 aa  71.2  0.000000000005  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  31.62 
 
 		 377 aa  70.9  0.000000000005  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.0516082 
 
 
-
 
NC_013501  Rmar_0589  response regulator receiver modulated serine phosphatase  37.07 
 
 		 371 aa  70.9  0.000000000006  Rhodothermus marinus DSM 4252  Bacteria  normal  0.420228  n/a   
 
 
-
 
NC_011729  PCC7424_4207  two component transcriptional regulator, winged helix family  34.65 
 
 		 247 aa  70.9  0.000000000006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  33.9 
 
 		 229 aa  70.9  0.000000000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_011884  Cyan7425_1115  two component transcriptional regulator, winged helix family  35.83 
 
 		 243 aa  70.9  0.000000000006  Cyanothece sp. PCC 7425  Bacteria  normal  0.0950226  normal  1 
 
 
-
 
NC_009511  Swit_3187  response regulator receiver protein  33.87 
 
 		 136 aa  70.9  0.000000000006  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008817  P9515_01621  two-component response regulator  33.07 
 
 		 248 aa  70.9  0.000000000006  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.367767  n/a   
 
 
-
 
NC_010803  Clim_0176  response regulator receiver protein  34.45 
 
 		 124 aa  70.5  0.000000000007  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  31.93 
 
 		 310 aa  70.5  0.000000000007  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_008789  Hhal_0205  response regulator receiver protein  31.3 
 
 		 395 aa  70.5  0.000000000008  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_2062  response regulator receiver protein  33.33 
 
 		 217 aa  70.5  0.000000000008  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  31.67 
 
 		 379 aa  70.1  0.000000000009  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_008709  Ping_2984  two component transcriptional regulator, LuxR family protein  37.29 
 
 		 295 aa  70.1  0.000000000009  Psychromonas ingrahamii 37  Bacteria  normal  0.43543  normal  0.546259 
 
 
-
 
NC_007577  PMT9312_0136  two component transcriptional regulator  32.28 
 
 		 248 aa  70.1  0.000000000009  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  32.77 
 
 		 328 aa  69.7  0.00000000001  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  38.71 
 
 		 237 aa  69.3  0.00000000001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_0653  two-component response regulator PhoB  33.88 
 
 		 230 aa  69.7  0.00000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.131558  n/a   
 
 
-
 
NC_008820  P9303_01831  two-component response regulator  31.67 
 
 		 290 aa  70.1  0.00000000001  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  1 
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  31.36 
 
 		 391 aa  69.7  0.00000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_011146  Gbem_2025  response regulator receiver sensor signal transduction histidine kinase  32.81 
 
 		 452 aa  69.7  0.00000000001  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_0581  winged helix family two component transcriptional regulator  35 
 
 		 242 aa  70.1  0.00000000001  'Nostoc azollae' 0708  Bacteria  normal  0.296955  n/a   
 
 
-
 
NC_008820  P9303_26531  two-component response regulator  33.86 
 
 		 248 aa  69.7  0.00000000001  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  1 
 
 
-
 
NC_012669  Bcav_0840  two component transcriptional regulator, winged helix family  38.1 
 
 		 241 aa  69.3  0.00000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.214337  normal  0.533835 
 
 
-
 
NC_011729  PCC7424_2881  two component transcriptional regulator, LuxR family  32 
 
 		 212 aa  69.3  0.00000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_007604  Synpcc7942_1453  two component transcriptional regulator  34.15 
 
 		 244 aa  68.9  0.00000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.952418  normal  0.0249242 
 
 
-
 
NC_007954  Sden_2689  phosphate regulon transcriptional regulatory protein phoB  37.29 
 
 		 229 aa  69.3  0.00000000002  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000627834  n/a   
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  32.28 
 
 		 170 aa  68.6  0.00000000002  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_008819  NATL1_02061  two-component response regulator  33.86 
 
 		 248 aa  69.3  0.00000000002  Prochlorococcus marinus str. NATL1A  Bacteria  normal  1  normal  0.540525 
 
 
-
 
NC_008312  Tery_0954  two component transcriptional regulator  35.43 
 
 		 243 aa  68.9  0.00000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.0817018 
 
 
-
 
NC_008541  Arth_0784  two component transcriptional regulator  39.13 
 
 		 239 aa  69.3  0.00000000002  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_010816  BLD_0005  response regulator  37.61 
 
 		 243 aa  68.9  0.00000000002  Bifidobacterium longum DJO10A  Bacteria  normal  0.201532  n/a   
 
 
-
 
NC_009091  P9301_18111  two-component response regulator  33.33 
 
 		 248 aa  68.6  0.00000000003  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1016  two component transcriptional regulator, winged helix family  35 
 
 		 243 aa  68.6  0.00000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_4003  response regulator  32.5 
 
 		 357 aa  68.2  0.00000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013061  Phep_0505  response regulator receiver  33.9 
 
 		 1334 aa  68.6  0.00000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_3005  response regulator receiver  34.48 
 
 		 361 aa  68.6  0.00000000003  Dechloromonas aromatica RCB  Bacteria  normal  0.931132  normal  1 
 
 
-
 
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  34.45 
 
 		 236 aa  68.6  0.00000000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  decreased coverage  0.0000906935 
 
 
-
 
NC_009976  P9211_17451  two-component response regulator  30.71 
 
 		 269 aa  68.6  0.00000000003  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007513  Syncc9902_0308  two component transcriptional regulator  33.07 
 
 		 248 aa  68.6  0.00000000003  Synechococcus sp. CC9902  Bacteria  normal  0.030574  n/a   
 
 
-
 
NC_007577  PMT9312_1712  two component transcriptional regulator  33.33 
 
 		 248 aa  68.6  0.00000000003  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_2815  response regulator receiver modulated diguanylate cyclase  35.04 
 
 		 457 aa  68.2  0.00000000003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.631579  normal  0.0857187 
 
 
-
 
NC_008312  Tery_4323  two component LuxR family transcriptional regulator  31.97 
 
 		 215 aa  68.6  0.00000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.115662  normal  0.727411 
 
 
-
 
NC_008816  A9601_01511  two-component response regulator  32.28 
 
 		 248 aa  68.6  0.00000000003  Prochlorococcus marinus str. AS9601  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_1277  response regulator receiver modulated diguanylate cyclase  33.33 
 
 		 454 aa  68.6  0.00000000003  Maricaulis maris MCS10  Bacteria  normal  0.410696  normal  0.0388481 
 
 
-
 
NC_008700  Sama_1074  response regulator receiver protein  36.44 
 
 		 229 aa  68.6  0.00000000003  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000246777  normal  0.491091 
 
 
-
 
NC_009052  Sbal_1378  two component transcriptional regulator  37.61 
 
 		 229 aa  68.2  0.00000000004  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000291119  n/a   
 
 
-
 
NC_004347  SO_1558  phosphate regulon response regulator PhoB  37.61 
 
 		 239 aa  68.2  0.00000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1296  two component transcriptional regulator  37.61 
 
 		 229 aa  68.2  0.00000000004  Shewanella putrefaciens CN-32  Bacteria  unclonable  0.000000000460678  n/a   
 
 
-
 
NC_007335  PMN2A_1500  two component transcriptional regulator  33.07 
 
 		 248 aa  68.2  0.00000000004  Prochlorococcus marinus str. NATL2A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007354  Ecaj_0304  response regulator PleD  35.04 
 
 		 458 aa  67.8  0.00000000004  Ehrlichia canis str. Jake  Bacteria  normal  0.0864091  n/a   
 
 
-
 
NC_009665  Shew185_1364  two component transcriptional regulator  37.61 
 
 		 229 aa  68.2  0.00000000004  Shewanella baltica OS185  Bacteria  hitchhiker  0.0000657343  n/a   
 
 
-
 
NC_011663  Sbal223_2981  two component transcriptional regulator PhoB, winged helix family  37.61 
 
 		 229 aa  68.2  0.00000000004  Shewanella baltica OS223  Bacteria  hitchhiker  0.000000220801  hitchhiker  0.00121997 
 
 
-
 
NC_011726  PCC8801_1812  two component transcriptional regulator, LuxR family  33.33 
 
 		 231 aa  68.2  0.00000000004  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2709  two component transcriptional regulator  37.61 
 
 		 229 aa  67.8  0.00000000004  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00000407229  decreased coverage  0.000000263688 
 
 
-
 
NC_008322  Shewmr7_2777  two component transcriptional regulator  37.61 
 
 		 229 aa  67.8  0.00000000004  Shewanella sp. MR-7  Bacteria  unclonable  0.000000628627  decreased coverage  0.000208697 
 
 
-
 
NC_008752  Aave_2238  response regulator receiver protein  31.36 
 
 		 140 aa  68.2  0.00000000004  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0218186  hitchhiker  0.00000354209 
 
 
-
 
NC_008576  Mmc1_0435  response regulator receiver protein  35.48 
 
 		 373 aa  68.2  0.00000000004  Magnetococcus sp. MC-1  Bacteria  normal  0.0149866  normal  1 
 
 
-
 
NC_013161  Cyan8802_1838  two component transcriptional regulator, LuxR family  33.33 
 
 		 231 aa  68.2  0.00000000004  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_2879  two component transcriptional regulator  37.61 
 
 		 229 aa  67.8  0.00000000004  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000000143261  hitchhiker  0.00000615281 
 
 
-
 
NC_013216  Dtox_1955  two component transcriptional regulator, winged helix family  34.19 
 
 		 236 aa  68.2  0.00000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.295041  normal  1 
 
 
-
 
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