Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0505 |
Symbol | |
ID | 8251592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 607617 |
End bp | 611621 |
Gene Length | 4005 bp |
Protein Length | 1334 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644934155 |
Product | response regulator receiver |
Protein accession | YP_003090791 |
Protein GI | 255530419 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACACCA AACTAACCAA ACTATTCCTT GTATTTTTTT TGCTGTTCAG TGTGGTAAGC ATTGGCTACA GCCAGTCGTA CTCCTTCAGG CACTACCAGG TAGAGAATGG TCTATCTTAC AACTCCGTGA TCTGCAGTTT ACAGGACAAG AAAGGATTTT TGTGGTTTGG CACAAAAGAT GGCTTAAACA GATTTGATGG CTATACATTT AAAATATTTA GAAATGATCC CGATAATCCG GAAAGCATCG GGAACAATTT TATCCATAGC CTGTATGAAG ATAAGAACCA GACCATTTGG ATTGGCACAC TTACCGGGCT CTATAAGTAC GATCCACTTA AAGAAAGTTT TAGCCTGGTT CCCCCTTCAA AAGGATATGA CATCAGAGAT GTAAGTGCAG ACAGCCGCGG AAATATATGG TATATAACAG GCTTGTTCCT TTCACGATAT AATGTAAAAA CAAAGCAAAA CATCACATAC AGGAACAAAT CACATACCGG TACAACCTCT ATCAGCATCA GTGAAAAAGA TGATATCTGG GTGTCATCAG CTGATGGTTT CATCCAAAGA TACCAGCCGG CCACCGACTC ATTTATTAGT TATAAGGTAT TTGATAAATC CAAACCGGCC ATCTCCCCGT GGATAGAAAA GGTATATCAT ACCAATAAAG GATATCTACT GGTTGGGACT TCAAATCAGG GAATAAAAAT ATTTGATATC CATACGTTGT CCTACCGGGA CCTGTTAACC TCTAATCCCG ACAACACAGC CATCTATGCA AGAGATTTTA TGGATATAGG AAATGATAGA TACTGGATAG CGACAGAATC AGGATTGTTT ATTTATGATA TGAAGACAGG TAAATATAAA AACCTGCGCA ATAAATTCAA CGATCCTTAT TCTATTTCAG ATAATGCAGT CTATACCCTG TGTAAAGACA AAGAAGGCGG GATTTTTGTA GGAACGTATT TCGGGGGCGT AAACTATTAT GCAAAGGAAT TTACCTCCTT TGATAAATTT TTCCCACAGG CTTCCGGCAA TAGTCTAAGC GGCTATGCGG TTAAAGAAAT ATGCAATGAT AAATATGGGA ACCTCTGGAT TGGCACAGAA GATGCCGGCT TAAATAGGCT GAATGCTAAA ACCGGGGTAT TTGAACATTT TAAACCAGGT GGAGGCAAAA CCACCATTAG CCATACCAAT ATCCACGGAT TGCTGGCTAC AGATGATGAA CTTTGGGTAG GAACTTTTGA ACGTGGACTG GACGTCATAG ACATCAATAC CTTAAAAGTA ATCAGGCATT ACCAGGTAGG AAATAAGCCC AACCAGTTAA AAAGCAATTT TATTGAATCC ATATTAAAAA CCCGTTCAGG AGACATACTG CTGGGCAGTT CTTATGGACT GTACAGATAT AATAAACATA GCGATGACTT CAGCCTGCTG AATGAAGTGC CGGGAAATCT GCATTACCAA TATTTAATGG AAGACAATTC CGGCAATATA TGGGCAGGCT CATTAAGGGA TGGCCTGTAT ATTTATAATA ATGGCGACAG AAGATCCACT TCCTATAAGT TCGAAGAAAA TAATACCAAA AGCCTGAGCA GCAATGCCAT AAATAGCATT TTCCAGGACA GCCAAGGTAA CATCTGGGTT GCAACAGAAA ATGGTCTCAA CCGCTTTAAT GAAAAAGACA AAAGTTTTGC CAGGTATACT ACCAAAAATG GCTTTCCAAG CAATGTTTTC TATAGGATCC TCGAAGATCA AAAGCAGAAC CTGTGGATCA GTACCTCTCG TGGACTTGTG TGTTTTAGTC CGGATGAAAA GATAACACTA TATACCAGAT CCAATGGCTT GCTGAACGAT CAGTTCAACT ATGGTTCGGC GTATAAGAAT AAGAATGGCC GGATGTATTT TGGCAGCGTT AAAGGAATGA TCAGCTTCCT GCCAGATGAG TTTAGAAAAA ACCAGTTTGT TCCGCCAATT TACATTACAG GCTTCCAGGT GTACAACAAA GAACTGCAAA TCGGTCAAAA GAATTCTCCC TTGGCCCAAT CGATCAATTT TACCAGGGTA CTGAACCTTG AACACCACCA ATCCACGTTT AGTATTGATT TCGCTGCGCT AGGGTACACG GCACCCGAAA TGACAGAATA CACCTATACA ATGGAAGGTT TGGACCAAAA CTGGACCTAT CTTAAAACAA ACAGGAAAGT ATATTTTACT AACCTCGCGC CGGGTACGTA TACATTTAAG GTGAAGGCCA CGAACAGCAG TGGCATTTGG AATCCCTATG TGGCCAGCCT TAAAATTGTC ATCAGCCCTC CTTATTGGGC AAGTCCTATG GCTTATCTGC TTTACTTCAT CATTGTGGTA ACTGCCATAT ACTACGGCAT AAAATATTAC CATCAAAGAA CCAGCGATAG AAATAAAAGA AGGATCGAGC GCTGGGAATC TAAAAAGGAA ACGGAGCTTT ACCAGGCTAA AATCGAATTT TTCACTTATG TTACCCATGA AATTAAAACA CCCCTAACCC TGATCAAAGG TCCTTTAGAG GAAGTGATGC GCCATGCAGA AGCCTTACCC CAGGTCAAAG AAAACCTAAC GACCATGGAA AAAAACACCA ATCGTCTGAT AGAACTGACC GATCAACTCC TGGGCTTCAG AAAAACTGAG ATTGAAGGCT TTAACCTCAG TTTTGTAAAT GTAAACATCA ACGACATCCT GAAAGAGAAC TGTTCCAGGT TCAAAACAGC TATTGAACAT AAAAAACTGG AATTAACTGT AGATTTACCA GAGATGCCCC TCTATGCTTA TGCCGATCCA GAAGCACTAA ACAAGATATT CAGTAACCTG ATCGATAATG CGGTAAAATA TTCCAGAAGC GAAATTTCGG TAAAGCTGGT CACCTATGAG CACAATTTCG TGATCACCGT AGCCAGTGAC GGTAAAGTTA TTCCAGAAAA TTTCCGGGAA AAGATCTTCG AACCCTTCTT CAGAATGACC AGTGCAGGAT CGGAAAGAGG AGCAGGCATT GGCCTGGCCC TGGCCCGATC CCTTACTGAA TTGCACGAGG GGACTTTGGG GCTAAAAAAT GAGGATAAAA AATACAACAA CTTTGTATTG ACCCTACCCA TACGCCATGA ACAAGAATTT AAAATCAGTT TAACAGAAAC AAGCCCTATT GCAAAAAGCA TCTCACAAAA AAAAGATGCG ACAAATTGTC CCGTCATTTT AGTGGTAGAA GACAATACAG AGATCCGTAC CTTCATTGCA GGTAAACTGG CTAAAGATTT TGAGGTATTA CAAGCTGGAA ACGGACAGGA GGCGCTGGAT ATCTTAAAAG AAAAAAGCAC TCATCTGATC ATCAGCGACA TCATGATGCC GGTTTTAGAT GGAATAGCAT TGTGCAGAGC GGTGAAGGAG AACCTGGAAT ATGCACACAT ACCGATCATC CTGCTCACCG CAAAAAATAC TTTACAGTCT AAAATAGAAG GCCTGGAGGT TGGTGCAGAT GCCTATCTGG AAAAACCTTT CTCTCCGGAT CATTTGTTAA CCCAGGTTTC CAATTTATTG GCAGGCAGGG ATAAAATTAA AAACTACTTT GCAAGTTCTC CGCTGGTTCA CATCAAGAGT ATGGCCTACA ATAAAGCAGA TGAGGCTTTT CTGGAAACAC TTTATGAGGC CATCCATAAA AACCTGGACA ACAAATCCCT GGATGTAGAT CAACTGGCAG AAATCATGCA CATGAGCAGA CCAACACTAT ACCGGAAAAT CAAGGCCATT TCTAACCTTT CACCACACGA GCTCATCAAC ATCACCCGGC TTAAACGGGC AGCCGAACTG CTGGCTGAAG GAAACCATAA GATCCTGAAA ATCGCTTCCA TGACGGGTTT CAGTTCTCAG ACCCAATTTG GGAGATCTTT TCTTAAACAG TTTGGTATGA CACCTTCTGA ATATGCTGCT TCGAAGCAGT TGACTATAGC TGGTCAATCT TGCAGTCCTA ACTGA
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Protein sequence | MYTKLTKLFL VFFLLFSVVS IGYSQSYSFR HYQVENGLSY NSVICSLQDK KGFLWFGTKD GLNRFDGYTF KIFRNDPDNP ESIGNNFIHS LYEDKNQTIW IGTLTGLYKY DPLKESFSLV PPSKGYDIRD VSADSRGNIW YITGLFLSRY NVKTKQNITY RNKSHTGTTS ISISEKDDIW VSSADGFIQR YQPATDSFIS YKVFDKSKPA ISPWIEKVYH TNKGYLLVGT SNQGIKIFDI HTLSYRDLLT SNPDNTAIYA RDFMDIGNDR YWIATESGLF IYDMKTGKYK NLRNKFNDPY SISDNAVYTL CKDKEGGIFV GTYFGGVNYY AKEFTSFDKF FPQASGNSLS GYAVKEICND KYGNLWIGTE DAGLNRLNAK TGVFEHFKPG GGKTTISHTN IHGLLATDDE LWVGTFERGL DVIDINTLKV IRHYQVGNKP NQLKSNFIES ILKTRSGDIL LGSSYGLYRY NKHSDDFSLL NEVPGNLHYQ YLMEDNSGNI WAGSLRDGLY IYNNGDRRST SYKFEENNTK SLSSNAINSI FQDSQGNIWV ATENGLNRFN EKDKSFARYT TKNGFPSNVF YRILEDQKQN LWISTSRGLV CFSPDEKITL YTRSNGLLND QFNYGSAYKN KNGRMYFGSV KGMISFLPDE FRKNQFVPPI YITGFQVYNK ELQIGQKNSP LAQSINFTRV LNLEHHQSTF SIDFAALGYT APEMTEYTYT MEGLDQNWTY LKTNRKVYFT NLAPGTYTFK VKATNSSGIW NPYVASLKIV ISPPYWASPM AYLLYFIIVV TAIYYGIKYY HQRTSDRNKR RIERWESKKE TELYQAKIEF FTYVTHEIKT PLTLIKGPLE EVMRHAEALP QVKENLTTME KNTNRLIELT DQLLGFRKTE IEGFNLSFVN VNINDILKEN CSRFKTAIEH KKLELTVDLP EMPLYAYADP EALNKIFSNL IDNAVKYSRS EISVKLVTYE HNFVITVASD GKVIPENFRE KIFEPFFRMT SAGSERGAGI GLALARSLTE LHEGTLGLKN EDKKYNNFVL TLPIRHEQEF KISLTETSPI AKSISQKKDA TNCPVILVVE DNTEIRTFIA GKLAKDFEVL QAGNGQEALD ILKEKSTHLI ISDIMMPVLD GIALCRAVKE NLEYAHIPII LLTAKNTLQS KIEGLEVGAD AYLEKPFSPD HLLTQVSNLL AGRDKIKNYF ASSPLVHIKS MAYNKADEAF LETLYEAIHK NLDNKSLDVD QLAEIMHMSR PTLYRKIKAI SNLSPHELIN ITRLKRAAEL LAEGNHKILK IASMTGFSSQ TQFGRSFLKQ FGMTPSEYAA SKQLTIAGQS CSPN
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