| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2689 |
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| Symbol | |
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| ID | 4019206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3220311 |
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| End bp | 3221000 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956733 |
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| Product | phosphate regulon transcriptional regulatory protein phoB |
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| Protein accession | YP_563691 |
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| Protein GI | 91794040 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000627834 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGCTA GGATTTTAAT AGTAGAAGAC GAATCAGCGA TTCGTGAAAT GCTTATTTTT
GTTATGGAAC AACACGGTTT TACTACAGTT GCTGCCGAGG ATTTTGACTC GGCCATAGGG
CTACTGCAAG AACCTTATCC GGATCTTATT CTGTTAGATT GGATGTTCCC AGGCGGCAGT
GGCATTCAAT TGGCTAAACG CTTAAAACAA GATAAGTTTA CCCGTCAGAT CCCCATCATA
ATGCTAACCG CACGCGGTGA GGAAGAAGAT AAAGTCAAAG GGCTTGAAGT AGGCGCCGAT
GATTATATCA CCAAACCTTT TTCGCCAAAG GAGCTGGTGG CGCGGATAAA AGCGGTGCTG
CGCCGCAGTG CGCCGACACG TTTGGAGGAA ACTATCGACG TTCAGGGCCT GCAATTAGAT
CCTGTTAGTC ACAGGGTTTG CGTGGGTGAT TCAGTGCTCG ATATGGGGCC GACAGAGTTT
AGGTTGCTGC ACTTCTTTAT GACTCATCCA GAGCGAGTCT ATAGTCGTGA GCAGTTGCTT
GATAATGTCT GGGGCACCAA TGTCTATGTG GAAGACCGGA CGGTAGATGT GCACATCAGA
CGTTTGCGTA AAGCAGTAGA GAATACCGGC CATGACAGAC TCATACAGAC AGTACGAGGC
GCGGGCTACC GTTTCTCGAC ACGTATGTAG
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| Protein sequence | MTARILIVED ESAIREMLIF VMEQHGFTTV AAEDFDSAIG LLQEPYPDLI LLDWMFPGGS
GIQLAKRLKQ DKFTRQIPII MLTARGEEED KVKGLEVGAD DYITKPFSPK ELVARIKAVL
RRSAPTRLEE TIDVQGLQLD PVSHRVCVGD SVLDMGPTEF RLLHFFMTHP ERVYSREQLL
DNVWGTNVYV EDRTVDVHIR RLRKAVENTG HDRLIQTVRG AGYRFSTRM
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