Gene Cpin_3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3706 
Symbol 
ID8359874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4653314 
End bp4653745 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content40% 
IMG OID644965875 
Productresponse regulator receiver protein 
Protein accessionYP_003123369 
Protein GI256422716 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.322274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.186621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATTGG ATCGATTAGT AATATTAAAT TGGTTAAAGG TGAAAAAAAC AGTTTTAATA 
ATAGATGATA GTTTACCCAT CCGATATTTA CTTGAGGTAA TGCTAAACAG AACATACAAC
GTCGTATCAG CTTGCGACGG TCTGGCTGCA ATGGCTTGGC TCAAGAATGG CAACATCCCC
GATCTCGTTA TCACAGACCT CCAGATGCCA AACATCAACG GATGGGAACT CATAGAGTTC
ATGACAGAGA GCAATCTGTA CCAGCATATA CCTTTAATGG TGCTTTCCGG TGTACACGAC
ACTAAAGAAT CTTTTGCAAA CATCCGCCCC GGAAATATCA AAACGATTAT CAAAAAGCCT
TTTGATCCGG TTATCTTACT GGATACAATT GATCATGTAT TGAAAGCGCA GCATGTCCCT
GCTTTCTCTT AG
 
Protein sequence
MVLDRLVILN WLKVKKTVLI IDDSLPIRYL LEVMLNRTYN VVSACDGLAA MAWLKNGNIP 
DLVITDLQMP NINGWELIEF MTESNLYQHI PLMVLSGVHD TKESFANIRP GNIKTIIKKP
FDPVILLDTI DHVLKAQHVP AFS