Gene Aave_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2238 
Symbol 
ID4666486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2459203 
End bp2459625 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content69% 
IMG OID639823443 
Productresponse regulator receiver protein 
Protein accessionYP_970590 
Protein GI120610912 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0218186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000354209 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTCAAT CTTCGCAAGT GATTGCGCGC CCACCCATGA AGACCGTACT CATCGTTGAC 
GACCATGCAG AGATCCGCCG CCTTCTGCGC ATGACGCTGG AAGACCAGGG GGTGGCCCTG
CACGAGGCCG CGAGCGGCGA AGCCGCCCTG GCGATGGCGC GCGCGCAGCG GCCCGACCTG
GTGCTGCTGG ATCTGATGAT GCCCGGTTCG CTCGACGGAA TGGAGGTCTG CCGGCGCATC
CGCAACGATC CGGACCTCTC CCACACCCGC GTCATCATTC TGAGCGCGCG CGACGGCCTG
CAGGACCGCG CCGCGGGCAT GCAGGCCGGT GCGAGCGGCT TCATTTCCAA GCCCTTCAGC
CCCGCCTACC TCGCCGAGAC CGTGCGGCGC CTCGACACCG CCGGGACCCC GGTGGCCGGC
TGA
 
Protein sequence
MIQSSQVIAR PPMKTVLIVD DHAEIRRLLR MTLEDQGVAL HEAASGEAAL AMARAQRPDL 
VLLDLMMPGS LDGMEVCRRI RNDPDLSHTR VIILSARDGL QDRAAGMQAG ASGFISKPFS
PAYLAETVRR LDTAGTPVAG