| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3187 |
|---|
| Symbol | |
|---|
| ID | 5198064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 3496567 |
|---|
| End bp | 3496977 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640582733 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001263672 |
|---|
| Protein GI | 148556090 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCGG GGCGCGACGT CCCGGACGAC GGGAAGACGG GCGTGCCCAA GACGATCCTC
ACCGTGGATG ATTCAGCGTT CATCCGCAAA CTGCTCCGCA TGGCCCTGTC GGGGCAGGGC
TTCCTCGTGG CCGAGGCCGA GGACGGCGTC GCCGCGCTCG AATGGCTCGA CGTCCATGAC
CGGCCCGACG TGATGATCAC CGACATCAAC ATGCCGCGCC TCGACGGCTT CGGGCTGGTC
GCGGCGGTGC GGGCCCAGGA CCGCCACGAC GGCATGCCGA TCCTCGTCCT GTCGACCGAA
AGCTCCGACG ACAAGCAGGA CCGCGCCCGC ACCGCCGGTG CCGACGGCTG GCTGGTCAAG
CCCTTCGACC CCGCGCAGCT CGCCCGGGCG ATCGAGAGCG TCTCGCCATG A
|
|---|
| Protein sequence | MAAGRDVPDD GKTGVPKTIL TVDDSAFIRK LLRMALSGQG FLVAEAEDGV AALEWLDVHD
RPDVMITDIN MPRLDGFGLV AAVRAQDRHD GMPILVLSTE SSDDKQDRAR TAGADGWLVK
PFDPAQLARA IESVSP
|
|---|
| |