More than 300 homologs were found in PanDaTox collection
for query gene BLD_0005 on replicon NC_010816
Organism: Bifidobacterium longum DJO10A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010816  BLD_0005  response regulator  100 
 
 
243 aa  486  1e-136  Bifidobacterium longum DJO10A  Bacteria  normal  0.201532  n/a   
 
 
-
 
NC_013721  HMPREF0424_0720  response regulator receiver domain protein  85.95 
 
 
246 aa  424  1e-118  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.351492 
 
 
-
 
NC_013521  Sked_31480  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  69.71 
 
 
239 aa  339  2.9999999999999998e-92  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00376265  normal  0.556858 
 
 
-
 
NC_013174  Jden_2051  two component transcriptional regulator, winged helix family  70.59 
 
 
236 aa  338  4e-92  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2937  two component transcriptional regulator, winged helix family  68.72 
 
 
243 aa  337  9.999999999999999e-92  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0717  two component transcriptional regulator, winged helix family  67.8 
 
 
242 aa  328  5.0000000000000004e-89  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00000387016 
 
 
-
 
NC_012669  Bcav_0840  two component transcriptional regulator, winged helix family  65 
 
 
241 aa  316  2e-85  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.214337  normal  0.533835 
 
 
-
 
NC_012803  Mlut_04130  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  66.38 
 
 
236 aa  307  1.0000000000000001e-82  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118973  n/a   
 
 
-
 
NC_008541  Arth_0784  two component transcriptional regulator  65.38 
 
 
239 aa  305  6e-82  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_07910  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  64.85 
 
 
239 aa  302  2.0000000000000002e-81  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3620  two component transcriptional regulator, winged helix family  65.15 
 
 
239 aa  301  9e-81  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0253056  normal  0.477246 
 
 
-
 
NC_013169  Ksed_21620  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  61.32 
 
 
238 aa  299  2e-80  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.019443  normal  0.0473518 
 
 
-
 
NC_011886  Achl_0899  two component transcriptional regulator, winged helix family  65.38 
 
 
236 aa  293  2e-78  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.383063 
 
 
-
 
NC_013510  Tcur_0578  two component transcriptional regulator, winged helix family  62.03 
 
 
244 aa  292  3e-78  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4657  two component transcriptional regulator, winged helix family  59.58 
 
 
240 aa  290  2e-77  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8872  response regulator receiver protein  60.67 
 
 
234 aa  282  3.0000000000000004e-75  Streptosporangium roseum DSM 43021  Bacteria  normal  0.347509  normal 
 
 
-
 
NC_009953  Sare_4064  two component transcriptional regulator  60.59 
 
 
233 aa  280  1e-74  Salinispora arenicola CNS-205  Bacteria  normal  0.98903  normal  0.0666639 
 
 
-
 
NC_009380  Strop_3686  response regulator receiver  60.17 
 
 
233 aa  280  1e-74  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8879  response regulator receiver protein  59.26 
 
 
235 aa  279  3e-74  Streptosporangium roseum DSM 43021  Bacteria  normal  0.103439  normal 
 
 
-
 
NC_008146  Mmcs_4590  two component transcriptional regulator  57.74 
 
 
239 aa  277  1e-73  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4678  two component transcriptional regulator  57.74 
 
 
239 aa  277  1e-73  Mycobacterium sp. KMS  Bacteria  normal  0.337028  normal  0.895878 
 
 
-
 
NC_009077  Mjls_4973  two component transcriptional regulator  57.74 
 
 
239 aa  277  1e-73  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1581  two component transcriptional regulator  56.63 
 
 
238 aa  276  2e-73  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5144  two component transcriptional regulator, winged helix family  57.38 
 
 
236 aa  275  5e-73  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.204078  normal  0.858106 
 
 
-
 
NC_008726  Mvan_5175  two component transcriptional regulator  58.16 
 
 
236 aa  274  8e-73  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10772  two component system response transcriptional positive regulator phoP  57.32 
 
 
247 aa  273  2.0000000000000002e-72  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.864575 
 
 
-
 
NC_008578  Acel_1449  two component transcriptional regulator  55.56 
 
 
246 aa  270  2e-71  Acidothermus cellulolyticus 11B  Bacteria  normal  0.566781  normal 
 
 
-
 
NC_009953  Sare_0219  two component transcriptional regulator  57.5 
 
 
237 aa  264  1e-69  Salinispora arenicola CNS-205  Bacteria  normal  0.127265  hitchhiker  0.00333518 
 
 
-
 
NC_014165  Tbis_3276  winged helix family two component transcriptional regulator  56.33 
 
 
234 aa  264  1e-69  Thermobispora bispora DSM 43833  Bacteria  normal  0.208422  normal  0.192837 
 
 
-
 
NC_013441  Gbro_0822  response regulator receiver  54.81 
 
 
241 aa  261  8.999999999999999e-69  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0530683  n/a   
 
 
-
 
NC_013595  Sros_4916  response regulator receiver protein  56.61 
 
 
233 aa  260  1e-68  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3631  two component transcriptional regulator, winged helix family  54.81 
 
 
235 aa  259  2e-68  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  52.87 
 
 
237 aa  256  2e-67  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_2277  two component transcriptional regulator  54.08 
 
 
248 aa  254  9e-67  Salinispora arenicola CNS-205  Bacteria  normal  0.113906  normal  0.0109188 
 
 
-
 
NC_013739  Cwoe_4508  two component transcriptional regulator, winged helix family  52.56 
 
 
231 aa  253  2.0000000000000002e-66  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3036  two component transcriptional regulator, winged helix family  53.45 
 
 
273 aa  251  5.000000000000001e-66  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.106658  normal 
 
 
-
 
NC_013235  Namu_4408  two component transcriptional regulator, winged helix family  51.68 
 
 
230 aa  251  6e-66  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_32700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  54.74 
 
 
271 aa  251  1e-65  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.442824  normal  0.485424 
 
 
-
 
NC_009380  Strop_2130  response regulator receiver  54.08 
 
 
252 aa  251  1e-65  Salinispora tropica CNB-440  Bacteria  normal  0.539517  hitchhiker  0.00279069 
 
 
-
 
NC_007333  Tfu_0257  response regulator receiver  50.64 
 
 
241 aa  246  2e-64  Thermobifida fusca YX  Bacteria  normal  0.926332  n/a   
 
 
-
 
NC_007777  Francci3_0308  two component transcriptional regulator  50.84 
 
 
239 aa  246  3e-64  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3267  winged helix family two component transcriptional regulator  53.81 
 
 
229 aa  246  3e-64  Thermobispora bispora DSM 43833  Bacteria  normal  0.0891778  normal  0.213955 
 
 
-
 
NC_007777  Francci3_0234  two component transcriptional regulator  50.42 
 
 
242 aa  244  9.999999999999999e-64  Frankia sp. CcI3  Bacteria  normal  normal  0.925989 
 
 
-
 
NC_009921  Franean1_6507  two component transcriptional regulator  51.24 
 
 
270 aa  241  6e-63  Frankia sp. EAN1pec  Bacteria  normal  0.0763131  normal  0.20607 
 
 
-
 
NC_007777  Francci3_0321  two component transcriptional regulator  52.56 
 
 
406 aa  240  2e-62  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6588  two component transcriptional regulator  49.59 
 
 
229 aa  240  2e-62  Frankia sp. EAN1pec  Bacteria  normal  0.13217  normal 
 
 
-
 
NC_008699  Noca_3695  response regulator receiver  51.72 
 
 
236 aa  238  5e-62  Nocardioides sp. JS614  Bacteria  normal  0.795948  n/a   
 
 
-
 
NC_009565  TBFG_11051  two component system transcriptional regulator trcR  50.21 
 
 
257 aa  236  3e-61  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1418  response regulator receiver  48.96 
 
 
251 aa  235  4e-61  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0582944 
 
 
-
 
NC_014151  Cfla_3340  two component transcriptional regulator, winged helix family  49.79 
 
 
258 aa  233  2.0000000000000002e-60  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0454745 
 
 
-
 
NC_013093  Amir_0379  two component transcriptional regulator, winged helix family  51.08 
 
 
233 aa  232  4.0000000000000004e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  0.605912  n/a   
 
 
-
 
NC_011886  Achl_0804  two component transcriptional regulator, winged helix family  50.63 
 
 
246 aa  229  2e-59  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009953  Sare_1384  two component transcriptional regulator  47.52 
 
 
252 aa  230  2e-59  Salinispora arenicola CNS-205  Bacteria  decreased coverage  0.00801111  normal  0.0620226 
 
 
-
 
NC_008541  Arth_0655  two component transcriptional regulator  49.79 
 
 
246 aa  227  1e-58  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2296  two component transcriptional regulator  47.23 
 
 
255 aa  221  7e-57  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.398969  normal  0.240289 
 
 
-
 
NC_009565  TBFG_13797  two component transcriptional regulatory protein  51.27 
 
 
286 aa  221  8e-57  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.173423 
 
 
-
 
NC_009921  Franean1_6496  two component transcriptional regulator  49.58 
 
 
231 aa  217  1e-55  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00132974  normal  0.338684 
 
 
-
 
NC_008146  Mmcs_3926  two component transcriptional regulator  51.08 
 
 
254 aa  216  2e-55  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4000  two component transcriptional regulator  51.08 
 
 
254 aa  216  2e-55  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3941  two component transcriptional regulator  51.08 
 
 
254 aa  216  2e-55  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0990172 
 
 
-
 
NC_008726  Mvan_4429  two component transcriptional regulator  50.86 
 
 
250 aa  215  5e-55  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.133228  normal 
 
 
-
 
NC_013947  Snas_5255  two component transcriptional regulator, winged helix family  49.14 
 
 
242 aa  214  7e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0134474  normal 
 
 
-
 
NC_013235  Namu_4688  two component transcriptional regulator, winged helix family  52.52 
 
 
252 aa  212  2.9999999999999995e-54  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0280  two component transcriptional regulator, winged helix family  45.73 
 
 
225 aa  212  3.9999999999999995e-54  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1724  two component transcriptional regulator, winged helix family  52.36 
 
 
243 aa  209  2e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_22060  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  46.75 
 
 
254 aa  206  2e-52  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0729677  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  46.86 
 
 
235 aa  204  1e-51  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009338  Mflv_2266  two component transcriptional regulator  48.51 
 
 
249 aa  204  1e-51  Mycobacterium gilvum PYR-GCK  Bacteria  decreased coverage  0.00896474  normal 
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  45.38 
 
 
234 aa  200  1.9999999999999998e-50  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  45.64 
 
 
239 aa  200  1.9999999999999998e-50  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6147  two component transcriptional regulator, winged helix family  46.38 
 
 
244 aa  200  1.9999999999999998e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.200947 
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  46.58 
 
 
229 aa  200  1.9999999999999998e-50  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_008148  Rxyl_3017  two component transcriptional regulator  46.12 
 
 
225 aa  197  9e-50  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  44.81 
 
 
239 aa  197  1.0000000000000001e-49  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  44.81 
 
 
239 aa  197  1.0000000000000001e-49  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  44.81 
 
 
239 aa  197  1.0000000000000001e-49  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  44.81 
 
 
239 aa  197  1.0000000000000001e-49  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0539  DNA-binding response regulator PhoP  44.81 
 
 
239 aa  197  1.0000000000000001e-49  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000130788 
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  44.81 
 
 
239 aa  197  1.0000000000000001e-49  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_011725  BCB4264_A4699  DNA-binding response regulator PhoP  44.81 
 
 
239 aa  197  1.0000000000000001e-49  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  44.81 
 
 
239 aa  197  1.0000000000000001e-49  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  44.81 
 
 
239 aa  197  1.0000000000000001e-49  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1823  two component transcriptional regulator, winged helix family  49.58 
 
 
241 aa  196  2.0000000000000003e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.506413  normal 
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  44.17 
 
 
238 aa  195  5.000000000000001e-49  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1435  two component transcriptional regulator, winged helix family  45.61 
 
 
233 aa  193  2e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  42.39 
 
 
234 aa  192  3e-48  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2242  two component transcriptional regulator, winged helix family  41.95 
 
 
224 aa  192  3e-48  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.415885 
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  42.39 
 
 
234 aa  192  3e-48  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_007644  Moth_1478  two component transcriptional regulator  45.06 
 
 
240 aa  192  5e-48  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000111909  normal 
 
 
-
 
NC_009972  Haur_2799  two component transcriptional regulator  43.15 
 
 
236 aa  192  5e-48  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000368356  n/a   
 
 
-
 
NC_013595  Sros_6397  response regulator receiver protein  41.6 
 
 
237 aa  191  8e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.680662  normal  0.0804167 
 
 
-
 
NC_013061  Phep_3673  response regulator receiver  41.03 
 
 
227 aa  189  2e-47  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3286  two component transcriptional regulator, winged helix family  42.49 
 
 
228 aa  190  2e-47  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.167791  n/a   
 
 
-
 
NC_005945  BAS2056  DNA-binding response regulator  43.53 
 
 
227 aa  189  2.9999999999999997e-47  Bacillus anthracis str. Sterne  Bacteria  normal  0.413172  n/a   
 
 
-
 
NC_011773  BCAH820_2240  DNA-binding response regulator  43.53 
 
 
227 aa  189  2.9999999999999997e-47  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.85177e-28 
 
 
-
 
NC_009921  Franean1_5311  two component transcriptional regulator  40.96 
 
 
246 aa  189  2.9999999999999997e-47  Frankia sp. EAN1pec  Bacteria  normal  0.554395  normal  0.310406 
 
 
-
 
NC_007333  Tfu_0343  response regulator receiver  43.7 
 
 
232 aa  189  2.9999999999999997e-47  Thermobifida fusca YX  Bacteria  normal  0.86362  n/a   
 
 
-
 
NC_007530  GBAA_2212  DNA-binding response regulator  43.53 
 
 
227 aa  189  2.9999999999999997e-47  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2095  two component transcriptional regulator, winged helix family  43.46 
 
 
256 aa  189  2.9999999999999997e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP1256  alkaline phosphatase synthesis transcriptional regulatory protein PhoP  43.39 
 
 
236 aa  189  5e-47  Staphylococcus epidermidis RP62A  Bacteria  normal  0.577358  n/a   
 
 
-
 
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