More than 300 homologs were found in PanDaTox collection
for query gene PSPA7_4863 on replicon NC_009656
Organism: Pseudomonas aeruginosa PA7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_4863  LuxR family DNA-binding response regulator  100 
 
 
272 aa  555  1e-157  Pseudomonas aeruginosa PA7  Bacteria  normal  0.090532  n/a   
 
 
-
 
NC_008463  PA14_55810  putative two-component response regulator  94.55 
 
 
275 aa  526  1e-148  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0640  two component LuxR family transcriptional regulator  51.19 
 
 
269 aa  250  2e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0613  two component LuxR family transcriptional regulator  52.38 
 
 
258 aa  248  1e-64  Pseudomonas putida F1  Bacteria  normal  0.0682847  normal 
 
 
-
 
NC_002947  PP_0574  LuxR family DNA-binding response regulator  52.38 
 
 
258 aa  247  2e-64  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0619  two component LuxR family transcriptional regulator  50.76 
 
 
258 aa  242  3.9999999999999997e-63  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0738447 
 
 
-
 
NC_010501  PputW619_4590  two component LuxR family transcriptional regulator  51.78 
 
 
258 aa  239  2.9999999999999997e-62  Pseudomonas putida W619  Bacteria  normal  normal  0.038066 
 
 
-
 
NC_007005  Psyr_4376  LuxR response regulator receiver  47.66 
 
 
265 aa  228  7e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.945677 
 
 
-
 
NC_004578  PSPTO_4836  DNA binding response regulator, LuxR family  47.41 
 
 
260 aa  225  6e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.765839  n/a   
 
 
-
 
NC_008340  Mlg_2151  two component LuxR family transcriptional regulator  35.89 
 
 
264 aa  143  3e-33  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.104213 
 
 
-
 
NC_007604  Synpcc7942_1860  two component LuxR family transcriptional regulator  27.13 
 
 
235 aa  82.4  0.000000000000007  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2881  two component transcriptional regulator, LuxR family  24.08 
 
 
212 aa  80.1  0.00000000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_5215  two component transcriptional regulator, LuxR family  25.1 
 
 
217 aa  76.6  0.0000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2955  two component transcriptional regulator, LuxR family  28.06 
 
 
231 aa  76.6  0.0000000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.800941 
 
 
-
 
NC_014210  Ndas_4366  two component transcriptional regulator, LuxR family  28.51 
 
 
225 aa  75.9  0.0000000000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2987  LuxR family two component transcriptional regulator  28.34 
 
 
231 aa  75.1  0.000000000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0804  two component LuxR family transcriptional regulator  29.15 
 
 
204 aa  73.9  0.000000000003  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2153  response regulator receiver protein  31.36 
 
 
129 aa  72.4  0.000000000008  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.217001  normal  0.0793276 
 
 
-
 
NC_008312  Tery_4323  two component LuxR family transcriptional regulator  25.2 
 
 
215 aa  71.6  0.00000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  0.115662  normal  0.727411 
 
 
-
 
NC_008340  Mlg_1669  two component LuxR family transcriptional regulator  25.51 
 
 
221 aa  71.6  0.00000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  28.91 
 
 
211 aa  70.9  0.00000000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5184  response regulator receiver domain-containing protein  35.43 
 
 
148 aa  70.9  0.00000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0546005  normal  0.118263 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  26.17 
 
 
227 aa  71.2  0.00000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0626  two component, sigma54 specific, Fis family transcriptional regulator  38.74 
 
 
460 aa  70.1  0.00000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0301  two component LuxR family transcriptional regulator  28.74 
 
 
231 aa  70.1  0.00000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.54347  normal 
 
 
-
 
NC_011891  A2cp1_0883  two component, sigma54 specific, transcriptional regulator, Fis family  32 
 
 
466 aa  70.1  0.00000000004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.879866  n/a   
 
 
-
 
NC_010581  Bind_1884  response regulator receiver sensor signal transduction histidine kinase  36.89 
 
 
389 aa  70.1  0.00000000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.329348  normal 
 
 
-
 
NC_011145  AnaeK_0879  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
466 aa  69.3  0.00000000007  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  26.85 
 
 
215 aa  68.9  0.00000000008  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  26.85 
 
 
215 aa  68.9  0.00000000008  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  26.85 
 
 
215 aa  68.9  0.00000000008  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007413  Ava_2324  two component LuxR family transcriptional regulator  24.9 
 
 
245 aa  68.9  0.00000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  0.42123  normal 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  26.85 
 
 
215 aa  68.9  0.00000000008  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  26.85 
 
 
215 aa  68.9  0.00000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0181  two component, sigma54 specific, Fis family transcriptional regulator  32.03 
 
 
423 aa  68.9  0.00000000008  Methylobacillus flagellatus KT  Bacteria  normal  decreased coverage  0.000041492 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  28.74 
 
 
229 aa  68.9  0.00000000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  26.61 
 
 
250 aa  68.6  0.0000000001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1500  Signal transduction histidine kinase (STHK) with CheB and CheR activity  23.5 
 
 
1483 aa  68.2  0.0000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0031  two component transcriptional regulator, LuxR family  26.1 
 
 
229 aa  68.6  0.0000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  26.42 
 
 
226 aa  68.6  0.0000000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009091  P9301_01891  two-component response regulator  26.29 
 
 
242 aa  68.2  0.0000000001  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.991625  n/a   
 
 
-
 
NC_009719  Plav_2050  two component, sigma54 specific, Fis family transcriptional regulator  33.1 
 
 
511 aa  68.6  0.0000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.155124  hitchhiker  0.000156568 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  25.49 
 
 
217 aa  68.6  0.0000000001  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_009972  Haur_0447  two component transcriptional regulator  33.08 
 
 
229 aa  68.2  0.0000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000245325  n/a   
 
 
-
 
NC_013223  Dret_2242  two component, sigma54 specific, transcriptional regulator, Fis family  34.38 
 
 
464 aa  67.4  0.0000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.719582 
 
 
-
 
NC_011726  PCC8801_1812  two component transcriptional regulator, LuxR family  26.1 
 
 
231 aa  67.8  0.0000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1838  two component transcriptional regulator, LuxR family  26.1 
 
 
231 aa  67.8  0.0000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008816  A9601_01871  two-component response regulator  25.9 
 
 
242 aa  67.8  0.0000000002  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.528311  n/a   
 
 
-
 
NC_008340  Mlg_2623  two component, sigma54 specific, Fis family transcriptional regulator  31.03 
 
 
456 aa  67.8  0.0000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2539  two component, sigma54 specific, Fis family transcriptional regulator  34.55 
 
 
487 aa  67.8  0.0000000002  Maricaulis maris MCS10  Bacteria  normal  0.846517  normal 
 
 
-
 
NC_009512  Pput_4322  two component, sigma54 specific, Fis family transcriptional regulator  31.48 
 
 
444 aa  67  0.0000000003  Pseudomonas putida F1  Bacteria  normal  0.713581  normal 
 
 
-
 
NC_011884  Cyan7425_0981  two component transcriptional regulator, LuxR family  25.91 
 
 
221 aa  67  0.0000000003  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.416641 
 
 
-
 
NC_007484  Noc_3019  two component, sigma-54 specific, Fis family transcriptional regulator  30.17 
 
 
455 aa  67.4  0.0000000003  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1829  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  32.48 
 
 
357 aa  67  0.0000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_0819  LuxR family two component transcriptional regulator  25.81 
 
 
227 aa  67.4  0.0000000003  'Nostoc azollae' 0708  Bacteria  normal  0.633548  n/a   
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  27.15 
 
 
508 aa  67  0.0000000003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  26.85 
 
 
215 aa  66.6  0.0000000004  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2101  response regulator receiver modulated metal dependent phosphohydrolase  32.48 
 
 
357 aa  66.6  0.0000000004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0833  two component, sigma54 specific, Fis family transcriptional regulator  32 
 
 
466 aa  66.6  0.0000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.96038  n/a   
 
 
-
 
NC_011145  AnaeK_2031  response regulator receiver modulated metal dependent phosphohydrolase  32.48 
 
 
357 aa  66.6  0.0000000004  Anaeromyxobacter sp. K  Bacteria  normal  0.306573  n/a   
 
 
-
 
NC_008345  Sfri_0620  two component transcriptional regulator, LuxR family protein  25.1 
 
 
209 aa  66.6  0.0000000004  Shewanella frigidimarina NCIMB 400  Bacteria  unclonable  0.000000000275655  n/a   
 
 
-
 
NC_007404  Tbd_0019  two component Fis family transcriptional regulator  26.44 
 
 
424 aa  66.2  0.0000000005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.217538 
 
 
-
 
NC_007513  Syncc9902_2107  two component LuxR family transcriptional regulator  25.4 
 
 
245 aa  66.2  0.0000000005  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  31.16 
 
 
458 aa  66.2  0.0000000005  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_009784  VIBHAR_07090  nitrogen regulation protein NtrX  28.43 
 
 
407 aa  65.9  0.0000000006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  31.16 
 
 
458 aa  65.9  0.0000000006  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0171  two component LuxR family transcriptional regulator  24.8 
 
 
242 aa  66.2  0.0000000006  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_0176  response regulator receiver modulated serine phosphatase  30.28 
 
 
378 aa  66.2  0.0000000006  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2359  putative two-component response regulator  33.82 
 
 
394 aa  65.9  0.0000000007  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2330  two component, sigma54 specific, transcriptional regulator, Fis family  33.9 
 
 
466 aa  65.9  0.0000000007  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  26.46 
 
 
215 aa  65.9  0.0000000007  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0389  two component, sigma54 specific, Fis family transcriptional regulator  34.06 
 
 
432 aa  65.9  0.0000000007  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5633  response regulator receiver protein  24.12 
 
 
218 aa  65.9  0.0000000007  Sinorhizobium medicae WSM419  Bacteria  normal  0.938686  normal  0.508699 
 
 
-
 
NC_007925  RPC_3976  two component, sigma54 specific, Fis family transcriptional regulator  32.19 
 
 
500 aa  65.9  0.0000000007  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.833176 
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  30.63 
 
 
472 aa  65.9  0.0000000008  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  33.87 
 
 
470 aa  65.5  0.000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_007335  PMN2A_1537  two component LuxR family transcriptional regulator  24.39 
 
 
242 aa  65.1  0.000000001  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_6282  two-component response regulator AlgB  30.53 
 
 
449 aa  65.1  0.000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  24.6 
 
 
215 aa  64.7  0.000000001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  31.01 
 
 
451 aa  65.1  0.000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_008819  NATL1_02441  two-component response regulator  24.39 
 
 
242 aa  65.1  0.000000001  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.72299  normal 
 
 
-
 
NC_010505  Mrad2831_4715  two component LuxR family transcriptional regulator  25.6 
 
 
196 aa  65.1  0.000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_72380  two-component response regulator AlgB  29.93 
 
 
449 aa  65.1  0.000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.415261  normal 
 
 
-
 
NC_011726  PCC8801_2430  two component transcriptional regulator, LuxR family  25.1 
 
 
223 aa  64.7  0.000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_3647  two component, sigma-54 specific, Fis family transcriptional regulator  26.38 
 
 
471 aa  64.3  0.000000002  Geobacter uraniireducens Rf4  Bacteria  normal  0.0209004  n/a   
 
 
-
 
NC_009972  Haur_3458  multi-sensor signal transduction histidine kinase  29.03 
 
 
958 aa  64.3  0.000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3849  response regulator receiver (CheY) modulated Serine phosphatase  33.33 
 
 
412 aa  63.9  0.000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.658628 
 
 
-
 
NC_012560  Avin_18020  sigma54-dependent response regulator of C4 dicarboxylate transport, two component; DctD  30.49 
 
 
446 aa  64.3  0.000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.266513  n/a   
 
 
-
 
NC_008541  Arth_2136  two component LuxR family transcriptional regulator  25.69 
 
 
254 aa  64.7  0.000000002  Arthrobacter sp. FB24  Bacteria  normal  0.0553154  n/a   
 
 
-
 
NC_013161  Cyan8802_3680  two component transcriptional regulator, LuxR family  25.1 
 
 
223 aa  64.7  0.000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.233635 
 
 
-
 
NC_009719  Plav_2358  response regulator receiver protein  26.75 
 
 
233 aa  64.3  0.000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.119902  normal  0.5156 
 
 
-
 
NC_009720  Xaut_1115  response regulator receiver protein  30.08 
 
 
127 aa  63.9  0.000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_5911  two component LuxR family transcriptional regulator  25.61 
 
 
219 aa  64.7  0.000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  38.39 
 
 
463 aa  64.7  0.000000002  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_008347  Mmar10_2156  response regulator receiver protein  28.24 
 
 
183 aa  64.3  0.000000002  Maricaulis maris MCS10  Bacteria  normal  normal  0.287119 
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  35.9 
 
 
470 aa  64.3  0.000000002  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_011004  Rpal_1519  two component transcriptional regulator, LuxR family  24.18 
 
 
228 aa  63.5  0.000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.444774  n/a   
 
 
-
 
NC_007298  Daro_2491  LuxR response regulator receiver  26.07 
 
 
211 aa  63.9  0.000000003  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000456787  normal 
 
 
-
 
NC_007498  Pcar_0259  two component signal transduction response regulator  33.88 
 
 
513 aa  63.5  0.000000003  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_2427  two component LuxR family transcriptional regulator  24.21 
 
 
245 aa  63.9  0.000000003  Synechococcus sp. CC9605  Bacteria  normal  0.27075  normal 
 
 
-
 
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