| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0613 |
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| Symbol | |
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| ID | 5193047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 691853 |
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| End bp | 692629 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640585065 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001265965 |
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| Protein GI | 148545863 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0682847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCAGAT CAGTGAGTGA AGTAAAGGTG TTGGTGGTTG ATGACCAACC GGTCATTGTC
GAACAGCTGA GTGAATTCCT TCAAACCAAG GGCTATGCCT GCGTTACAGC CCTCTCAACC
GACGAAGCCA TCGAGCACTA TGTGGCGGAC CCGACCATCG GCTTGCTCAT CTGTGACCTG
CACATGCCCG ATCGGGATGG CATCGAGTTG GTGCGCGCCT TGAAGGAAAT CAACGGCAGC
CAGCGCACGT TCGAAGCCAT CATGTTGACA GGGCGTGCCG AGAAACAGGA CTTGATCCGG
GCGATACGCG AAGGTTTTGC CGATTACTAC CAGAAGCCGA TGGACCTTGA TGAACTGCTG
GCAGGCGTCC GTCGGCAAGA AGCGGCTTTG CTGGAGCGCC AGCGCAACCT CCGTGATCTG
GGTGGGCTGA ACCAGCGCTT GCAGGAACTG GCCGAGTCGG TGGACGAACT GTATCAGGAC
CTGGAAAAAG CCCGTGGCCA AGGCACCCAC CGGCGTGCCA GTGATGCAGA AGAAAGCGAA
AGCGAGCTGC CAGCAGCGTT CGAGAAACTG TCACCACGCC AACTGGAAGT GGCGCGCCTG
GTTAGCAAGG GCAAGACCAA TTACCAGATC GCCTGTGAAC TGGGCATTAC CGAAAACACC
GTGAAGCTCT ATGTGTCTCA GGTTTTGCGT TTGACGCATA TGCACAACCG CACCCAACTG
GCTCTGGCGC TGACCCCCAG CTCGTCGCCC GTGCACCAGC GGTTCACGAC CCATTGA
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| Protein sequence | MSRSVSEVKV LVVDDQPVIV EQLSEFLQTK GYACVTALST DEAIEHYVAD PTIGLLICDL
HMPDRDGIEL VRALKEINGS QRTFEAIMLT GRAEKQDLIR AIREGFADYY QKPMDLDELL
AGVRRQEAAL LERQRNLRDL GGLNQRLQEL AESVDELYQD LEKARGQGTH RRASDAEESE
SELPAAFEKL SPRQLEVARL VSKGKTNYQI ACELGITENT VKLYVSQVLR LTHMHNRTQL
ALALTPSSSP VHQRFTTH
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