| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4836 |
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| Symbol | |
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| ID | 1186519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5476234 |
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| End bp | 5477016 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637396156 |
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| Product | DNA binding response regulator, LuxR family |
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| Protein accession | NP_794570 |
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| Protein GI | 28871951 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.765839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAACT ACCCGGTCCC AAAAATTCTG GTGGTCGATG ACCAACCTTT GATCGTTGAA
GAACTCGGCG AGTTTCTGGA AGGCTGCGGC TATGCGTGTG TGCGCTGTCA TTCAAGCCTT
GAAGCCATCG AGCACTTTGC CAACGACAGC GCCATCGGCA TCGTGCTGTG CGATCTGGAA
ATGCCCGGCA TGAATGGCAT CGAAATGGTC GAAGCCATGA AGATGGCGGG CGGCAAGACG
CATTTGTTCG AAGCCATCAT GCTGACCGGG CAAGCCGAGA AAAAGGATGT CATCAAGGCG
CTGCGGGCCG GCATTGCCGA TTACTACCAG AAGCCGGTCA ATCTTGATGA GCTGCTGGAA
GGCGTTCAGT CGCAGGTAGA AGCGCTGGCC GAGCGCCAGA AAAACCGCCA GCAATTGGGC
CTGCTGAACG AGAAACTCCA GTTTCTGGCG GCGTCCATTG ACGATCTTTA TCAGAATCTG
GACAGCGCTC AGAACACGCC GCAGGCCGGG CGCAAACCAC GGCTCAATGC TGAAAATGAC
TCACAGATGC CGGTGGCTCT GGCCAAACTG TCACGTCGCC AGCTCGATGT GGCGCGGCTG
GTCAGTACCG GGTTGACCAA TTATCAGATT GCCTGCGAAC TGGGCATTAC CGAAAACACC
GTAAAACTTT ACGTGTCGCA GGTTCTGCGC CTGACCCATA TGCATAACCG CACTCAACTG
GCGCTGGCAT TTTCACCCGG TAAAAGCGGG GAGCGGCAGC GGCTTATCGA AAGCCAGGGG
TAA
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| Protein sequence | MNNYPVPKIL VVDDQPLIVE ELGEFLEGCG YACVRCHSSL EAIEHFANDS AIGIVLCDLE
MPGMNGIEMV EAMKMAGGKT HLFEAIMLTG QAEKKDVIKA LRAGIADYYQ KPVNLDELLE
GVQSQVEALA ERQKNRQQLG LLNEKLQFLA ASIDDLYQNL DSAQNTPQAG RKPRLNAEND
SQMPVALAKL SRRQLDVARL VSTGLTNYQI ACELGITENT VKLYVSQVLR LTHMHNRTQL
ALAFSPGKSG ERQRLIESQG
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