| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_18020 |
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| Symbol | dctD |
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| ID | 7760737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1792609 |
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| End bp | 1793949 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643804701 |
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| Product | sigma54-dependent response regulator of C4 dicarboxylate transport, two component; DctD |
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| Protein accession | YP_002798990 |
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| Protein GI | 226943917 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.266513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAGA TTCTCTTCAT CGACGACGAA GCACCGATCC GCGAAGCGGT GCAGCAGTGG
CTGGAGCTGT CCGGGCTCGC GGTGCGTACC TGCGCCCACG CCGAGGAGGC GCTGGCGCTG
CTCGACGCCG ACTTCCCCGG GGTGGTGGTC AGCGATGTGC GCATGCCCGG CATGGACGGC
CTGGCGCTGC TCGAACGCCT CAAGGCGCTG GATGCCGAAT TGCCGGTGAT CATGGTCACC
GGGCATGGCG ACGTGCCCAT GGCGGTGACC GCGATGCAGC AGGGCGCCTA CGACTTCATC
GAGAAGCCCT TCAGCCCCGA GCGCCTGCTC GGCAGCCTGC GGCGCGCCCT GGAGATGCGC
CGGCTGGTCT GCGAGAACCG CGCGCTGCGC CGCCAGGTGG CGCGGCGCGA GCACATCGAG
GGCCGTCTGC TCGGCGTGTC GCCGGCGATG GAGGAACTGC GCCGGCAGAT CCTCGAACTG
GCGCCGACCA CGGTCAACGT GCTGGTCCGC GGCGAGACCG GCAGCGGCAA GGAATGCGTG
GCGCGCTGCC TGCACGCCTT CGGCCCGCGC GCCGGCAAGG CTTTCGTCGC GCTCAACTGC
GCGGCGATTC CCGAGCAGTT GTTCGAGAGC GAGCTGTTCG GCCACGAGAG CGGCGCCTTC
ACCGGCGCCC AGGGCAAGCG CATCGGCCGT ATCGAGCACG CCGACGGCGG CACCCTGTTC
CTCGACGAGA TCGAGAGCCT GCCGCTGGCG CAGCAGGCCA AGCTGTTGCG CGTGCTGCAG
GAGAAGACGC TGGAGCGGCT CGGCTCCAAC CGCAGCATCG CCGTCGACCT GCGGGTGATC
GGCGCGGTCA AGCCGGACCT GGTCGCCGAA GTGCGCGCCG GGCGTTTTCG CGAGGATCTC
CTGTACCGGC TCAATGTCGC CGAGTTGCGC GTCCCGCCGC TGCGCGAGCG GCGCGAGGAC
ATTCCGCTGC TGTTCGAGTA TTTCGCCCTC GCCGCGGCCG AGCGTCACGA CCGCGAACCG
CGCCCGCTGG CGGCCGCCGA ACTGGCGCGG CTCATGGCTC ACGACTGGCC GGGCAACGTG
CGCGAGCTGG TCAACGCCGC CGAGCGTCAC GTACTCGGCC TGGGCGGGCG GACCGGCGAG
GCGCTGGCGG CGCCGCGGTC GCTGGCGGCG CAGCTGGAGG CCTTCGAGGC GCAGTGCCTG
CGCCAGGCCC TGCAGCAGTG CCGCGGCAAC ATCGCCGAGG TCATGGCCCT GCTGCAACTG
CCCCGGCGGA CGCTCAACGA GAAGATGCAA CGCCACGGCC TGAACCGCAT CGATTTCCTG
CCCGCCGGGG ACCAGGACTG A
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| Protein sequence | MQQILFIDDE APIREAVQQW LELSGLAVRT CAHAEEALAL LDADFPGVVV SDVRMPGMDG
LALLERLKAL DAELPVIMVT GHGDVPMAVT AMQQGAYDFI EKPFSPERLL GSLRRALEMR
RLVCENRALR RQVARREHIE GRLLGVSPAM EELRRQILEL APTTVNVLVR GETGSGKECV
ARCLHAFGPR AGKAFVALNC AAIPEQLFES ELFGHESGAF TGAQGKRIGR IEHADGGTLF
LDEIESLPLA QQAKLLRVLQ EKTLERLGSN RSIAVDLRVI GAVKPDLVAE VRAGRFREDL
LYRLNVAELR VPPLRERRED IPLLFEYFAL AAAERHDREP RPLAAAELAR LMAHDWPGNV
RELVNAAERH VLGLGGRTGE ALAAPRSLAA QLEAFEAQCL RQALQQCRGN IAEVMALLQL
PRRTLNEKMQ RHGLNRIDFL PAGDQD
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