Gene Smed_5633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5633 
Symbol 
ID5319935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp599160 
End bp599816 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content61% 
IMG OID640777375 
Productresponse regulator receiver protein 
Protein accessionYP_001314307 
Protein GI150377712 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.938686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.508699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGA TCGTTCACAT CGTCGACGAC GACAAATCCT TTCGGACCGC CTTGGCGCGG 
TTGATGGGCG CCGCCGGATT TCGCACAGCC ACGTACGAGT CAGGCGAAGA CCTTCTGGCG
CGCCTGTCAG ACCCCGAGGC CGGATGCATT CTACTCGACC TGCACATGCC AGGCTTGAGC
GGTCTGGAGC TCCAGGACCA ACTCGCCGAA TGCGCTCCAA TGCTGCCGAT CGTGTTTTTG
ACGGGGCGAG CCGAAATCAG GGCAACCGTT CAAGCGATAA AGGCAGGCGC TGAGGATTTC
CTGGAGAAAC CGGCCTCCAG GGAGGCGTTG CTGGAGGCGG TCGATCGAGC ATTGCGCCGC
TGTGATGCAC GGCGTGCCGA ATACGATCGC ATCCATGCAC TCAAGGCACG TCTGGTGAGC
CTGACCCCGC GGGAATTCGA AGTGTTCGGC CTGATCACCC GCGGCAGGCG CAACAAGCAG
ATTGCCTATG ATCTAAGTAC GTCCGAACGG ACGGTCAAGG CGCACCGGCG TAGCGCCATG
GAAAAGCTCG GGGTGGGTTC GCTGGCCGAG GCAGTTTCGA TCGCGGAGAG ATTGGGACTA
CTTAATCCGA TGGCAAAGCC GCCGCAGCAC CAGAATAAAC GGCGCGCTTC CCCATAG
 
Protein sequence
MDPIVHIVDD DKSFRTALAR LMGAAGFRTA TYESGEDLLA RLSDPEAGCI LLDLHMPGLS 
GLELQDQLAE CAPMLPIVFL TGRAEIRATV QAIKAGAEDF LEKPASREAL LEAVDRALRR
CDARRAEYDR IHALKARLVS LTPREFEVFG LITRGRRNKQ IAYDLSTSER TVKAHRRSAM
EKLGVGSLAE AVSIAERLGL LNPMAKPPQH QNKRRASP