Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5633 |
Symbol | |
ID | 5319935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 599160 |
End bp | 599816 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640777375 |
Product | response regulator receiver protein |
Protein accession | YP_001314307 |
Protein GI | 150377712 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.938686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.508699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCGA TCGTTCACAT CGTCGACGAC GACAAATCCT TTCGGACCGC CTTGGCGCGG TTGATGGGCG CCGCCGGATT TCGCACAGCC ACGTACGAGT CAGGCGAAGA CCTTCTGGCG CGCCTGTCAG ACCCCGAGGC CGGATGCATT CTACTCGACC TGCACATGCC AGGCTTGAGC GGTCTGGAGC TCCAGGACCA ACTCGCCGAA TGCGCTCCAA TGCTGCCGAT CGTGTTTTTG ACGGGGCGAG CCGAAATCAG GGCAACCGTT CAAGCGATAA AGGCAGGCGC TGAGGATTTC CTGGAGAAAC CGGCCTCCAG GGAGGCGTTG CTGGAGGCGG TCGATCGAGC ATTGCGCCGC TGTGATGCAC GGCGTGCCGA ATACGATCGC ATCCATGCAC TCAAGGCACG TCTGGTGAGC CTGACCCCGC GGGAATTCGA AGTGTTCGGC CTGATCACCC GCGGCAGGCG CAACAAGCAG ATTGCCTATG ATCTAAGTAC GTCCGAACGG ACGGTCAAGG CGCACCGGCG TAGCGCCATG GAAAAGCTCG GGGTGGGTTC GCTGGCCGAG GCAGTTTCGA TCGCGGAGAG ATTGGGACTA CTTAATCCGA TGGCAAAGCC GCCGCAGCAC CAGAATAAAC GGCGCGCTTC CCCATAG
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Protein sequence | MDPIVHIVDD DKSFRTALAR LMGAAGFRTA TYESGEDLLA RLSDPEAGCI LLDLHMPGLS GLELQDQLAE CAPMLPIVFL TGRAEIRATV QAIKAGAEDF LEKPASREAL LEAVDRALRR CDARRAEYDR IHALKARLVS LTPREFEVFG LITRGRRNKQ IAYDLSTSER TVKAHRRSAM EKLGVGSLAE AVSIAERLGL LNPMAKPPQH QNKRRASP
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