More than 300 homologs were found in PanDaTox collection
for query gene Noca_1853 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_2922  acyl-CoA dehydrogenase domain protein  60.72 
 
 
617 aa  716    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3315  acyl-CoA dehydrogenase domain-containing protein  60.52 
 
 
645 aa  710    Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00913148 
 
 
-
 
NC_008699  Noca_1853  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
608 aa  1230    Nocardioides sp. JS614  Bacteria  normal  0.771828  n/a   
 
 
-
 
NC_008782  Ajs_1687  acyl-CoA dehydrogenase domain-containing protein  59.35 
 
 
642 aa  712    Acidovorax sp. JS42  Bacteria  normal  normal  0.291033 
 
 
-
 
NC_007908  Rfer_2384  acyl-CoA dehydrogenase-like  60.62 
 
 
618 aa  702    Rhodoferax ferrireducens T118  Bacteria  normal  0.225519  n/a   
 
 
-
 
NC_007948  Bpro_2570  acyl-CoA dehydrogenase-like  58.06 
 
 
627 aa  690    Polaromonas sp. JS666  Bacteria  normal  0.215249  normal  0.667801 
 
 
-
 
NC_011992  Dtpsy_2017  acyl-CoA dehydrogenase domain protein  59.48 
 
 
619 aa  714    Acidovorax ebreus TPSY  Bacteria  normal  0.875107  n/a   
 
 
-
 
NC_008825  Mpe_A1777  putative acyl-CoA dehydrogenase  59.12 
 
 
617 aa  692    Methylibium petroleiphilum PM1  Bacteria  normal  0.130183  normal  0.0640101 
 
 
-
 
NC_008752  Aave_2877  acyl-CoA dehydrogenase domain-containing protein  58.01 
 
 
652 aa  698    Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1444  acyl-CoA dehydrogenase domain protein  53.37 
 
 
622 aa  609  1e-173  Ralstonia pickettii 12J  Bacteria  normal  normal  0.0386828 
 
 
-
 
NC_003295  RSc1762  acyl-CoA dehydrogenase oxidoreductase protein  54.46 
 
 
625 aa  606  9.999999999999999e-173  Ralstonia solanacearum GMI1000  Bacteria  normal  0.492096  normal  0.209412 
 
 
-
 
NC_013441  Gbro_3567  acyl-CoA dehydrogenase domain protein  55.33 
 
 
591 aa  605  9.999999999999999e-173  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1485  acyl-CoA dehydrogenase domain protein  53.53 
 
 
622 aa  608  9.999999999999999e-173  Ralstonia pickettii 12D  Bacteria  normal  0.275641  normal  0.0574258 
 
 
-
 
NC_007347  Reut_A1408  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  52.95 
 
 
618 aa  604  1.0000000000000001e-171  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1320  acyl-CoA dehydrogenase domain-containing protein  55.07 
 
 
609 aa  604  1.0000000000000001e-171  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.895638 
 
 
-
 
NC_013510  Tcur_1227  acyl-CoA dehydrogenase domain protein  54.58 
 
 
599 aa  598  1e-170  Thermomonospora curvata DSM 43183  Bacteria  normal  0.556988  n/a   
 
 
-
 
NC_007510  Bcep18194_A4473  Acyl-CoA dehydrogenase  54.02 
 
 
609 aa  596  1e-169  Burkholderia sp. 383  Bacteria  normal  0.398734  normal 
 
 
-
 
NC_007973  Rmet_1852  acyl-CoA dehydrogenase-like protein  54.17 
 
 
619 aa  597  1e-169  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.232086 
 
 
-
 
NC_008542  Bcen2424_1341  acyl-CoA dehydrogenase domain-containing protein  54.9 
 
 
609 aa  587  1e-166  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4675  acyl-CoA dehydrogenase domain protein  54.33 
 
 
597 aa  588  1e-166  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0860  acyl-CoA dehydrogenase-like  54.9 
 
 
609 aa  587  1e-166  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1258  acyl-CoA dehydrogenase domain-containing protein  55.06 
 
 
609 aa  577  1.0000000000000001e-163  Burkholderia ambifaria MC40-6  Bacteria  normal  0.594087  normal 
 
 
-
 
NC_008786  Veis_1790  acyl-CoA dehydrogenase domain-containing protein  58.17 
 
 
563 aa  577  1.0000000000000001e-163  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_1233  acyl-CoA dehydrogenase domain-containing protein  54.39 
 
 
609 aa  572  1.0000000000000001e-162  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0100  acyl-CoA dehydrogenase domain-containing protein  52.93 
 
 
588 aa  560  1e-158  Mycobacterium sp. JLS  Bacteria  normal  normal  0.119602 
 
 
-
 
NC_008146  Mmcs_0110  acyl-CoA dehydrogenase-like protein  53.94 
 
 
588 aa  560  1e-158  Mycobacterium sp. MCS  Bacteria  normal  0.242894  n/a   
 
 
-
 
NC_008705  Mkms_0119  acyl-CoA dehydrogenase domain-containing protein  53.94 
 
 
588 aa  560  1e-158  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0234574 
 
 
-
 
NC_014210  Ndas_1582  acyl-CoA dehydrogenase domain protein  52.86 
 
 
598 aa  546  1e-154  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.900007  decreased coverage  0.00956274 
 
 
-
 
NC_007509  Bcep18194_C7558  Acyl-CoA dehydrogenase  50.34 
 
 
607 aa  538  9.999999999999999e-153  Burkholderia sp. 383  Bacteria  normal  0.0382442  normal  0.166512 
 
 
-
 
NC_010676  Bphyt_5032  acyl-CoA dehydrogenase domain protein  51.61 
 
 
601 aa  538  1e-151  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.690717 
 
 
-
 
NC_014158  Tpau_0702  acyl-CoA dehydrogenase domain protein  49.18 
 
 
606 aa  508  1e-143  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_66350  putative acyl-CoA dehydrogenase  47.13 
 
 
600 aa  499  1e-140  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5757  putative acyl-CoA dehydrogenase  47.29 
 
 
600 aa  499  1e-140  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0561  acyl-CoA dehydrogenase domain-containing protein  47.86 
 
 
622 aa  498  1e-139  Pseudomonas mendocina ymp  Bacteria  normal  hitchhiker  0.00000000252916 
 
 
-
 
NC_010501  PputW619_0517  acyl-CoA dehydrogenase domain-containing protein  47.76 
 
 
600 aa  489  1e-137  Pseudomonas putida W619  Bacteria  normal  0.0563795  normal  0.38064 
 
 
-
 
NC_009512  Pput_4821  acyl-CoA dehydrogenase domain-containing protein  47.6 
 
 
600 aa  486  1e-136  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2845  acyl-CoA dehydrogenase domain-containing protein  45.95 
 
 
600 aa  488  1e-136  Marinobacter aquaeolei VT8  Bacteria  normal  0.26253  n/a   
 
 
-
 
NC_002947  PP_4948  acyl-CoA dehydrogenase domain-containing protein  47.43 
 
 
600 aa  484  1e-135  Pseudomonas putida KT2440  Bacteria  normal  0.669366  normal 
 
 
-
 
NC_013946  Mrub_2720  acyl-CoA dehydrogenase domain-containing protein  48.19 
 
 
592 aa  482  1e-135  Meiothermus ruber DSM 1279  Bacteria  normal  0.78242  normal 
 
 
-
 
NC_007005  Psyr_0505  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  47.68 
 
 
600 aa  483  1e-135  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4997  acyl-CoA dehydrogenase domain-containing protein  46.93 
 
 
600 aa  481  1e-134  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5020  acyl-CoA dehydrogenase family protein  46.62 
 
 
600 aa  476  1e-133  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0451  Acyl-CoA dehydrogenase-like  46.36 
 
 
600 aa  475  1e-133  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.821544  normal 
 
 
-
 
NC_008010  Dgeo_2405  acyl-CoA dehydrogenase-like  47.46 
 
 
598 aa  474  1e-132  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2868  acyl-CoA dehydrogenase domain-containing protein  45.59 
 
 
602 aa  464  1e-129  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2141  acyl-CoA dehydrogenase-like  43.99 
 
 
616 aa  455  1.0000000000000001e-126  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2066  acyl-CoA dehydrogenase domain-containing protein  43.16 
 
 
601 aa  452  1e-125  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01005  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  42.81 
 
 
611 aa  446  1.0000000000000001e-124  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1573  acyl-CoA dehydrogenase domain-containing protein  46.58 
 
 
599 aa  446  1.0000000000000001e-124  Acidiphilium cryptum JF-5  Bacteria  normal  0.77864  n/a   
 
 
-
 
NC_009524  PsycPRwf_1004  acyl-CoA dehydrogenase domain-containing protein  41.78 
 
 
601 aa  439  9.999999999999999e-123  Psychrobacter sp. PRwf-1  Bacteria  normal  hitchhiker  0.0000430658 
 
 
-
 
NC_007969  Pcryo_0861  acyl-CoA dehydrogenase-like  40.19 
 
 
601 aa  401  9.999999999999999e-111  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1076  acyl-CoA dehydrogenase domain protein  40.54 
 
 
606 aa  376  1e-103  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.276449 
 
 
-
 
NC_013440  Hoch_4640  acyl-CoA dehydrogenase domain protein  40.26 
 
 
599 aa  367  1e-100  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2366  acyl-CoA dehydrogenase domain-containing protein  36.1 
 
 
601 aa  348  1e-94  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000727045  n/a   
 
 
-
 
NC_007336  Reut_C6066  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  38.55 
 
 
598 aa  343  5.999999999999999e-93  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2164  acyl-CoA dehydrogenase domain-containing protein  36.21 
 
 
605 aa  335  2e-90  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000583422  n/a   
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  36.59 
 
 
594 aa  334  2e-90  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  35.85 
 
 
594 aa  328  2.0000000000000001e-88  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  38.17 
 
 
596 aa  328  3e-88  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_009952  Dshi_0839  acyl-CoA dehydrogenase domain protein  36.93 
 
 
592 aa  327  5e-88  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.704355 
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  35.95 
 
 
595 aa  327  5e-88  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  37.19 
 
 
596 aa  326  8.000000000000001e-88  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  36.33 
 
 
595 aa  325  1e-87  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  35.97 
 
 
595 aa  323  4e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  34.97 
 
 
599 aa  323  4e-87  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  34.64 
 
 
595 aa  323  6e-87  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  34.64 
 
 
595 aa  323  6e-87  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  34.64 
 
 
595 aa  323  6e-87  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_007948  Bpro_3957  acyl-CoA dehydrogenase-like  35.5 
 
 
598 aa  323  7e-87  Polaromonas sp. JS666  Bacteria  normal  0.574903  normal 
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  35.13 
 
 
595 aa  322  9.000000000000001e-87  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  35.13 
 
 
595 aa  322  9.000000000000001e-87  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  35.13 
 
 
595 aa  322  9.000000000000001e-87  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  35.13 
 
 
595 aa  322  9.000000000000001e-87  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3477  acyl-CoA dehydrogenase domain-containing protein  35.67 
 
 
598 aa  322  9.999999999999999e-87  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.865632 
 
 
-
 
NC_008740  Maqu_0515  acyl-CoA dehydrogenase domain-containing protein  35.88 
 
 
591 aa  322  9.999999999999999e-87  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0446  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  37.48 
 
 
595 aa  322  1.9999999999999998e-86  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0810  acyl-CoA dehydrogenase domain protein  35.46 
 
 
598 aa  321  3e-86  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  35.95 
 
 
595 aa  320  5e-86  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  35.65 
 
 
595 aa  320  5e-86  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  34.8 
 
 
595 aa  320  7e-86  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  34.8 
 
 
595 aa  320  7e-86  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  34.8 
 
 
595 aa  320  7e-86  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  36.84 
 
 
595 aa  319  9e-86  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_012792  Vapar_5356  acyl-CoA dehydrogenase domain protein  37.9 
 
 
592 aa  319  1e-85  Variovorax paradoxus S110  Bacteria  normal  0.253086  n/a   
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  34.48 
 
 
595 aa  318  2e-85  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  36.95 
 
 
595 aa  315  9.999999999999999e-85  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_008463  PA14_06620  putative acyl-CoA dehydrogenase  35.98 
 
 
598 aa  315  1.9999999999999998e-84  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  35.63 
 
 
596 aa  315  1.9999999999999998e-84  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_008825  Mpe_A0419  putative acyl-CoA dehydrogenase oxidoreductase protein  36.13 
 
 
596 aa  314  2.9999999999999996e-84  Methylibium petroleiphilum PM1  Bacteria  normal  0.232992  normal 
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  36.35 
 
 
598 aa  313  4.999999999999999e-84  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_009720  Xaut_4445  acyl-CoA dehydrogenase domain-containing protein  36.33 
 
 
626 aa  313  9e-84  Xanthobacter autotrophicus Py2  Bacteria  normal  0.744679  normal  0.0140421 
 
 
-
 
NC_009524  PsycPRwf_0912  acyl-CoA dehydrogenase domain-containing protein  35.67 
 
 
597 aa  312  1e-83  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0592  acyl-CoA dehydrogenase domain-containing protein  35.55 
 
 
598 aa  312  1e-83  Acidovorax sp. JS42  Bacteria  normal  normal  0.559108 
 
 
-
 
NC_007963  Csal_2431  acyl-CoA dehydrogenase-like protein  38.05 
 
 
603 aa  311  2e-83  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0607  putative acyl-CoA dehydrogenase  36.85 
 
 
598 aa  311  2e-83  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  35.57 
 
 
595 aa  311  2.9999999999999997e-83  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_011138  MADE_02316  Acyl-CoA dehydrogenase  35.26 
 
 
599 aa  310  5e-83  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.254784  n/a   
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  35.4 
 
 
595 aa  309  6.999999999999999e-83  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_45920  acyl-CoA dehydrogenase  37.28 
 
 
601 aa  310  6.999999999999999e-83  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3519  acyl-CoA dehydrogenase-like  34.91 
 
 
598 aa  309  8e-83  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
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