More than 300 homologs were found in PanDaTox collection
for query gene PSPTO_5020 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013510  Tcur_1227  acyl-CoA dehydrogenase domain protein  56.49 
 
 
599 aa  654    Thermomonospora curvata DSM 43183  Bacteria  normal  0.556988  n/a   
 
 
-
 
NC_002947  PP_4948  acyl-CoA dehydrogenase domain-containing protein  80.83 
 
 
600 aa  1009    Pseudomonas putida KT2440  Bacteria  normal  0.669366  normal 
 
 
-
 
NC_003295  RSc1762  acyl-CoA dehydrogenase oxidoreductase protein  56.21 
 
 
625 aa  664    Ralstonia solanacearum GMI1000  Bacteria  normal  0.492096  normal  0.209412 
 
 
-
 
NC_004578  PSPTO_5020  acyl-CoA dehydrogenase family protein  100 
 
 
600 aa  1239    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0505  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  97.17 
 
 
600 aa  1207    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4821  acyl-CoA dehydrogenase domain-containing protein  81.17 
 
 
600 aa  1011    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2845  acyl-CoA dehydrogenase domain-containing protein  57.43 
 
 
600 aa  706    Marinobacter aquaeolei VT8  Bacteria  normal  0.26253  n/a   
 
 
-
 
NC_011138  MADE_01005  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  54.14 
 
 
611 aa  657    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1408  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  54.85 
 
 
618 aa  637    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5757  putative acyl-CoA dehydrogenase  82.33 
 
 
600 aa  1042    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0451  Acyl-CoA dehydrogenase-like  86.67 
 
 
600 aa  1098    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.821544  normal 
 
 
-
 
NC_010501  PputW619_0517  acyl-CoA dehydrogenase domain-containing protein  82.33 
 
 
600 aa  1025    Pseudomonas putida W619  Bacteria  normal  0.0563795  normal  0.38064 
 
 
-
 
NC_012856  Rpic12D_1485  acyl-CoA dehydrogenase domain protein  56.23 
 
 
622 aa  668    Ralstonia pickettii 12D  Bacteria  normal  0.275641  normal  0.0574258 
 
 
-
 
NC_008463  PA14_66350  putative acyl-CoA dehydrogenase  82.33 
 
 
600 aa  1040    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4675  acyl-CoA dehydrogenase domain protein  58.09 
 
 
597 aa  662    Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5032  acyl-CoA dehydrogenase domain protein  61.64 
 
 
601 aa  736    Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.690717 
 
 
-
 
NC_009092  Shew_2868  acyl-CoA dehydrogenase domain-containing protein  57.38 
 
 
602 aa  686    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1444  acyl-CoA dehydrogenase domain protein  56.23 
 
 
622 aa  669    Ralstonia pickettii 12J  Bacteria  normal  normal  0.0386828 
 
 
-
 
NC_008705  Mkms_0119  acyl-CoA dehydrogenase domain-containing protein  54.61 
 
 
588 aa  637    Mycobacterium sp. KMS  Bacteria  normal  normal  0.0234574 
 
 
-
 
NC_010322  PputGB1_4997  acyl-CoA dehydrogenase domain-containing protein  81.83 
 
 
600 aa  1019    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1852  acyl-CoA dehydrogenase-like protein  56.06 
 
 
619 aa  640    Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.232086 
 
 
-
 
NC_009439  Pmen_0561  acyl-CoA dehydrogenase domain-containing protein  78.7 
 
 
622 aa  994    Pseudomonas mendocina ymp  Bacteria  normal  hitchhiker  0.00000000252916 
 
 
-
 
NC_008146  Mmcs_0110  acyl-CoA dehydrogenase-like protein  54.61 
 
 
588 aa  637    Mycobacterium sp. MCS  Bacteria  normal  0.242894  n/a   
 
 
-
 
NC_008228  Patl_2141  acyl-CoA dehydrogenase-like  55.15 
 
 
616 aa  687    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0100  acyl-CoA dehydrogenase domain-containing protein  54.28 
 
 
588 aa  632  1e-180  Mycobacterium sp. JLS  Bacteria  normal  normal  0.119602 
 
 
-
 
NC_008010  Dgeo_2405  acyl-CoA dehydrogenase-like  54.7 
 
 
598 aa  632  1e-180  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2066  acyl-CoA dehydrogenase domain-containing protein  51.25 
 
 
601 aa  633  1e-180  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1320  acyl-CoA dehydrogenase domain-containing protein  54.55 
 
 
609 aa  628  1e-179  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.895638 
 
 
-
 
NC_007510  Bcep18194_A4473  Acyl-CoA dehydrogenase  54.19 
 
 
609 aa  622  1e-177  Burkholderia sp. 383  Bacteria  normal  0.398734  normal 
 
 
-
 
NC_009524  PsycPRwf_1004  acyl-CoA dehydrogenase domain-containing protein  51 
 
 
601 aa  616  1e-175  Psychrobacter sp. PRwf-1  Bacteria  normal  hitchhiker  0.0000430658 
 
 
-
 
NC_008542  Bcen2424_1341  acyl-CoA dehydrogenase domain-containing protein  54.05 
 
 
609 aa  613  9.999999999999999e-175  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1258  acyl-CoA dehydrogenase domain-containing protein  54.46 
 
 
609 aa  612  9.999999999999999e-175  Burkholderia ambifaria MC40-6  Bacteria  normal  0.594087  normal 
 
 
-
 
NC_007969  Pcryo_0861  acyl-CoA dehydrogenase-like  52.67 
 
 
601 aa  614  9.999999999999999e-175  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0860  acyl-CoA dehydrogenase-like  54.05 
 
 
609 aa  613  9.999999999999999e-175  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3567  acyl-CoA dehydrogenase domain protein  53.57 
 
 
591 aa  606  9.999999999999999e-173  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2720  acyl-CoA dehydrogenase domain-containing protein  52.68 
 
 
592 aa  606  9.999999999999999e-173  Meiothermus ruber DSM 1279  Bacteria  normal  0.78242  normal 
 
 
-
 
NC_008390  Bamb_1233  acyl-CoA dehydrogenase domain-containing protein  53.97 
 
 
609 aa  607  9.999999999999999e-173  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7558  Acyl-CoA dehydrogenase  51.8 
 
 
607 aa  583  1.0000000000000001e-165  Burkholderia sp. 383  Bacteria  normal  0.0382442  normal  0.166512 
 
 
-
 
NC_014210  Ndas_1582  acyl-CoA dehydrogenase domain protein  51.64 
 
 
598 aa  583  1.0000000000000001e-165  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.900007  decreased coverage  0.00956274 
 
 
-
 
NC_014158  Tpau_0702  acyl-CoA dehydrogenase domain protein  51.34 
 
 
606 aa  570  1e-161  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2017  acyl-CoA dehydrogenase domain protein  49.29 
 
 
619 aa  544  1e-153  Acidovorax ebreus TPSY  Bacteria  normal  0.875107  n/a   
 
 
-
 
NC_008825  Mpe_A1777  putative acyl-CoA dehydrogenase  50.24 
 
 
617 aa  545  1e-153  Methylibium petroleiphilum PM1  Bacteria  normal  0.130183  normal  0.0640101 
 
 
-
 
NC_008782  Ajs_1687  acyl-CoA dehydrogenase domain-containing protein  49.37 
 
 
642 aa  541  9.999999999999999e-153  Acidovorax sp. JS42  Bacteria  normal  normal  0.291033 
 
 
-
 
NC_009484  Acry_1573  acyl-CoA dehydrogenase domain-containing protein  48.57 
 
 
599 aa  529  1e-149  Acidiphilium cryptum JF-5  Bacteria  normal  0.77864  n/a   
 
 
-
 
NC_012791  Vapar_2922  acyl-CoA dehydrogenase domain protein  49.36 
 
 
617 aa  531  1e-149  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2570  acyl-CoA dehydrogenase-like  49.05 
 
 
627 aa  531  1e-149  Polaromonas sp. JS666  Bacteria  normal  0.215249  normal  0.667801 
 
 
-
 
NC_010002  Daci_3315  acyl-CoA dehydrogenase domain-containing protein  48.64 
 
 
645 aa  525  1e-147  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00913148 
 
 
-
 
NC_008752  Aave_2877  acyl-CoA dehydrogenase domain-containing protein  47.39 
 
 
652 aa  519  1e-146  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2384  acyl-CoA dehydrogenase-like  49.35 
 
 
618 aa  514  1e-144  Rhodoferax ferrireducens T118  Bacteria  normal  0.225519  n/a   
 
 
-
 
NC_008699  Noca_1853  acyl-CoA dehydrogenase domain-containing protein  46.62 
 
 
608 aa  476  1e-133  Nocardioides sp. JS614  Bacteria  normal  0.771828  n/a   
 
 
-
 
NC_013730  Slin_1076  acyl-CoA dehydrogenase domain protein  44.52 
 
 
606 aa  469  1.0000000000000001e-131  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.276449 
 
 
-
 
NC_013440  Hoch_4640  acyl-CoA dehydrogenase domain protein  43.83 
 
 
599 aa  468  9.999999999999999e-131  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1790  acyl-CoA dehydrogenase domain-containing protein  50.59 
 
 
563 aa  460  9.999999999999999e-129  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2164  acyl-CoA dehydrogenase domain-containing protein  37.89 
 
 
605 aa  419  1e-116  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000583422  n/a   
 
 
-
 
NC_009943  Dole_2366  acyl-CoA dehydrogenase domain-containing protein  38.47 
 
 
601 aa  402  9.999999999999999e-111  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000727045  n/a   
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  39.62 
 
 
594 aa  393  1e-108  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_009943  Dole_1305  acyl-CoA dehydrogenase domain-containing protein  37.44 
 
 
604 aa  392  1e-108  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000712718  n/a   
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  37.77 
 
 
596 aa  391  1e-107  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  40 
 
 
598 aa  389  1e-107  Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_007517  Gmet_2211  Acyl-CoA dehydrogenase-like  36.71 
 
 
615 aa  389  1e-107  Geobacter metallireducens GS-15  Bacteria  normal  0.0172956  normal  0.0102784 
 
 
-
 
NC_010322  PputGB1_0400  acyl-CoA dehydrogenase domain-containing protein  40.66 
 
 
592 aa  385  1e-106  Pseudomonas putida GB-1  Bacteria  normal  normal  0.672876 
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  39.34 
 
 
596 aa  385  1e-106  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  38.84 
 
 
594 aa  387  1e-106  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  37.71 
 
 
595 aa  382  1e-105  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  38.09 
 
 
595 aa  383  1e-105  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_008554  Sfum_1402  acyl-CoA dehydrogenase domain-containing protein  38.67 
 
 
619 aa  383  1e-105  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.55208 
 
 
-
 
NC_008782  Ajs_0592  acyl-CoA dehydrogenase domain-containing protein  39.34 
 
 
598 aa  385  1e-105  Acidovorax sp. JS42  Bacteria  normal  normal  0.559108 
 
 
-
 
NC_007492  Pfl01_5166  Acyl-CoA dehydrogenase-like  41.25 
 
 
592 aa  385  1e-105  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.164353 
 
 
-
 
NC_007948  Bpro_3957  acyl-CoA dehydrogenase-like  39.9 
 
 
598 aa  382  1e-105  Polaromonas sp. JS666  Bacteria  normal  0.574903  normal 
 
 
-
 
NC_010501  PputW619_4832  acyl-CoA dehydrogenase domain-containing protein  40.07 
 
 
592 aa  382  1e-105  Pseudomonas putida W619  Bacteria  normal  normal  0.946881 
 
 
-
 
NC_008825  Mpe_A0419  putative acyl-CoA dehydrogenase oxidoreductase protein  40.73 
 
 
596 aa  385  1e-105  Methylibium petroleiphilum PM1  Bacteria  normal  0.232992  normal 
 
 
-
 
NC_009512  Pput_0396  acyl-CoA dehydrogenase domain-containing protein  40.81 
 
 
592 aa  382  1e-105  Pseudomonas putida F1  Bacteria  normal  0.352257  normal 
 
 
-
 
NC_008781  Pnap_3477  acyl-CoA dehydrogenase domain-containing protein  40.24 
 
 
598 aa  383  1e-105  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.865632 
 
 
-
 
NC_008752  Aave_4089  acyl-CoA dehydrogenase domain-containing protein  39.55 
 
 
601 aa  383  1e-105  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0370  acyl-CoA dehydrogenase domain-containing protein  40.63 
 
 
592 aa  379  1e-104  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0746  acyl-CoA dehydrogenase family protein  39.19 
 
 
597 aa  380  1e-104  Brucella ovis ATCC 25840  Bacteria  normal  0.398029  n/a   
 
 
-
 
NC_003910  CPS_4476  acyl-CoA dehydrogenase family protein  38.46 
 
 
602 aa  380  1e-104  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0795  acyl-CoA dehydrogenase family protein  39.19 
 
 
597 aa  380  1e-104  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  37.75 
 
 
595 aa  382  1e-104  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0571  acyl-CoA dehydrogenase domain protein  39.17 
 
 
598 aa  380  1e-104  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  38.7 
 
 
595 aa  380  1e-104  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  39.23 
 
 
595 aa  380  1e-104  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2749  acyl-CoA dehydrogenase domain-containing protein  39.62 
 
 
596 aa  379  1e-104  Marinobacter aquaeolei VT8  Bacteria  normal  0.59666  n/a   
 
 
-
 
NC_009668  Oant_4033  acyl-CoA dehydrogenase domain-containing protein  38.64 
 
 
597 aa  381  1e-104  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.795877  n/a   
 
 
-
 
NC_011989  Avi_0599  acyl-CoA dehydrogenase  38.14 
 
 
597 aa  380  1e-104  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2039  acyl-CoA dehydrogenase domain-containing protein  36.27 
 
 
598 aa  382  1e-104  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  40.87 
 
 
592 aa  377  1e-103  Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_007434  BURPS1710b_2975  Acyl-CoA dehydrogenase  38.12 
 
 
596 aa  378  1e-103  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0810  acyl-CoA dehydrogenase domain protein  39.72 
 
 
598 aa  377  1e-103  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2926  acyl-CoA dehydrogenase domain-containing protein  38.12 
 
 
596 aa  378  1e-103  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  39.23 
 
 
595 aa  378  1e-103  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_011369  Rleg2_0213  acyl-CoA dehydrogenase domain protein  37.97 
 
 
598 aa  377  1e-103  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  37.65 
 
 
595 aa  377  1e-103  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_009074  BURPS668_2865  acyl-CoA dehydrogenase domain-containing protein  38.12 
 
 
596 aa  378  1e-103  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4079  acyl-CoA dehydrogenase domain-containing protein  40.52 
 
 
592 aa  377  1e-103  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  38.18 
 
 
595 aa  373  1e-102  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_009439  Pmen_3819  acyl-CoA dehydrogenase domain-containing protein  40.91 
 
 
590 aa  373  1e-102  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  40.52 
 
 
592 aa  375  1e-102  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6066  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  38.53 
 
 
598 aa  375  1e-102  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1337  acyl-CoA dehydrogenase domain-containing protein  39.83 
 
 
601 aa  374  1e-102  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
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