Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3315 |
Symbol | |
ID | 5748900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3636943 |
End bp | 3638880 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641298419 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001564338 |
Protein GI | 160898756 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00913148 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCCGCCA CCGCCTGTTC CCGTTACTCC TGTTGGCCGC ACGCGCTCCC TCTGGCGGCG CCTGCGGCTT CTTTTTTGAT TCCGGACATC ACCATGCGCC TGCGTTCCAC CATCGATTTC CTGCTCTATG AATGGCTGCG CGCCGATGCG CTGGGCGAGC GCGAGCGCTT TGCCGACCAT TCGCGCGACA CCTTCGATGC CGTGCTCGAC ACCTGCGAGC GCATCGCCCG CGAGAAATAC GCCCCCTTCA ACCGCACCGT GGACACGCAG GAGCCGCAGT TCGACGGCGA GAAAGTCATC CTGCCCCAGT GCACCCACGA TGCGCGCCAG GCCTATGCCG ACTCGGGCAT GCTCAGCGCC GCCCAGGACT ACGACATCGG CGGCATGCAG CTGCCCTACA CCGTGGAGGC GGCAGCCAAC AGCTTCTTCG CGGCGGCCTC CATCAGCATC GGCTCCAACA TGCTGACCTC GGGCAATGCC AACGCCATCA TGGCCCACGG CACGGACATG CAAAAACAGG TCTTTGCCAC CAATGAATTC AATGGCCGCT GGGCCGGCAC CATGTGCCTG TCCGAGCCCC AGGCCGGCTC GTCACTGAGC GACATTGCCA CCCGTGCCGA GCCCGATGGC GCCGACTTCG AGAGCGATGC GCTGGGTCCG CGCTACCGCC TCAAGGGCAA CAAGATGTGG ATCAGCGCGG GCGACCATGA GCTGACCGAG AACATCGTCC ACCTCGTGCT GGCCAAGATC CCCGGCCCCG ATGGCAAGCC CGTGCCCGGC GTCAAGGGCA TCTCGCTGTT CATCGTGCCC AAGAAGCTCG TGGACACCGA AGGCCAACTG ACCGGCGAGC GCAACGACGT CGCCCTGGCC GGCCTCAACC ACAAGCTGGG CTGGCGTGGC ACCACCAACA CGCTGCTGAA CTTCGGGGAA GGGCGCTTTC CCGTGCGCGG CGGCGCCGGG GCCGTGGGCT ACCTGGTCGG CAAGCCCGGC GAGGGCCTCA AATGCATGTT CCACATGATG AACGAGGCCC GCATCTCCAT CGGCATGGCC GCCACCATGC TGGGCCTGGC CGGCTACCAC GCCAGCCTGG ACTATGCGCA GAACCGCCCG CAGGGCCGGC CGATCAAGGG GGCGCCGGGT GCAGCCGGCA AGGATGCCAC GCGCCCCCAG TCGCGCATCA TCGAGCACGC CGACGTCAAG CGCATGCTGC TGGCGCAGAA GTCCTATTGC GAAGGCGCGC TGGCGCTGAA CCTGTTCTGC GCGCGCCTGG TCGATGAGCA GCACACCGGC ACGCCCGAAT CCGTGGCCGA GGCACGGCTG CTGCTGGAAG TGCTCACCCC CATCTCCAAG AGCTGGCCCA GCGAGTTCTG CCTGGAGGCC AACTCCCTGG CCATCCAGAT CCACGGCGGC TACGGCTACA CGCGCGACTT TCCCGTGGAG CAATACTGGC GCGACAACCG CCTGAACATG ATCCATGAAG GCACGCACGG CATCCAGGCC ATGGACCTGC TGGGCCGCAA GGTGCTCATG GAAGGCGGCA AGGGCCTGCA GCTGCTGGCC ACGCGCGTCA ACGACACCAT CCAGCGCGCC ATGGCCCGGC CCGAGCTGGC CGGCCACGCC AACGAACTGG CCAAGGCCCT GCAGGAAGTC GGCGCCACCA CCAAGGCCGC ATGGGCCACC GACGACCCGC AACAGGCCCT GGCCAATGCC GTGCCGTACA TGCAGGCCTT CGGCCACACG GTACTGGCCT GGACCTGGCT GGACGTGTCC CTGGCCGTAC TCGCCAAGGA CGCCGCCCTG GCCGAACCCG CCAACGCTGG CCGCATGGCC GCCATGCGCT ACTTCTTTGG CTACGAGCTG CCGAAGATCG GCGCCTGGCT CAAGGTCGTG CGTGAGCGCG ACATGACTTG CGCGCAGATG AGTGAAGAGG CGTTCTGA
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Protein sequence | MAATACSRYS CWPHALPLAA PAASFLIPDI TMRLRSTIDF LLYEWLRADA LGERERFADH SRDTFDAVLD TCERIAREKY APFNRTVDTQ EPQFDGEKVI LPQCTHDARQ AYADSGMLSA AQDYDIGGMQ LPYTVEAAAN SFFAAASISI GSNMLTSGNA NAIMAHGTDM QKQVFATNEF NGRWAGTMCL SEPQAGSSLS DIATRAEPDG ADFESDALGP RYRLKGNKMW ISAGDHELTE NIVHLVLAKI PGPDGKPVPG VKGISLFIVP KKLVDTEGQL TGERNDVALA GLNHKLGWRG TTNTLLNFGE GRFPVRGGAG AVGYLVGKPG EGLKCMFHMM NEARISIGMA ATMLGLAGYH ASLDYAQNRP QGRPIKGAPG AAGKDATRPQ SRIIEHADVK RMLLAQKSYC EGALALNLFC ARLVDEQHTG TPESVAEARL LLEVLTPISK SWPSEFCLEA NSLAIQIHGG YGYTRDFPVE QYWRDNRLNM IHEGTHGIQA MDLLGRKVLM EGGKGLQLLA TRVNDTIQRA MARPELAGHA NELAKALQEV GATTKAAWAT DDPQQALANA VPYMQAFGHT VLAWTWLDVS LAVLAKDAAL AEPANAGRMA AMRYFFGYEL PKIGAWLKVV RERDMTCAQM SEEAF
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