More than 300 homologs were found in PanDaTox collection
for query gene Vapar_5356 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  54.56 
 
 
595 aa  664    Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  54.73 
 
 
595 aa  665    Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  54.22 
 
 
595 aa  660    Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  54.73 
 
 
595 aa  672    Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  55.07 
 
 
595 aa  674    Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  54.9 
 
 
595 aa  673    Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  53.72 
 
 
595 aa  655    Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6066  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  61.43 
 
 
598 aa  739    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0446  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  53.55 
 
 
595 aa  656    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  55.07 
 
 
595 aa  665    Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  54.73 
 
 
595 aa  672    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  55.57 
 
 
595 aa  668    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  54.9 
 
 
599 aa  675    Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  54.9 
 
 
595 aa  674    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  54.73 
 
 
595 aa  672    Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_012792  Vapar_5356  acyl-CoA dehydrogenase domain protein  100 
 
 
592 aa  1216    Variovorax paradoxus S110  Bacteria  normal  0.253086  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  55.07 
 
 
595 aa  674    Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  55.07 
 
 
595 aa  674    Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  53.89 
 
 
595 aa  660    Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  55.07 
 
 
595 aa  674    Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  54.56 
 
 
595 aa  665    Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  54.9 
 
 
595 aa  673    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  54.73 
 
 
595 aa  672    Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  54.9 
 
 
595 aa  673    Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_008786  Veis_1224  acyl-CoA dehydrogenase domain-containing protein  53.2 
 
 
598 aa  632  1e-180  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010531  Pnec_0962  acyl-CoA dehydrogenase domain protein  51.01 
 
 
595 aa  634  1e-180  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3957  acyl-CoA dehydrogenase-like  52.29 
 
 
598 aa  620  1e-176  Polaromonas sp. JS666  Bacteria  normal  0.574903  normal 
 
 
-
 
NC_008781  Pnap_3477  acyl-CoA dehydrogenase domain-containing protein  51.78 
 
 
598 aa  615  1e-175  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.865632 
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  51.79 
 
 
594 aa  614  9.999999999999999e-175  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  51.7 
 
 
594 aa  614  9.999999999999999e-175  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_1337  acyl-CoA dehydrogenase domain-containing protein  50.93 
 
 
601 aa  610  1e-173  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0419  putative acyl-CoA dehydrogenase oxidoreductase protein  51.52 
 
 
596 aa  610  1e-173  Methylibium petroleiphilum PM1  Bacteria  normal  0.232992  normal 
 
 
-
 
NC_010524  Lcho_4032  acyl-CoA dehydrogenase domain-containing protein  51.1 
 
 
596 aa  605  9.999999999999999e-173  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000200788 
 
 
-
 
NC_008752  Aave_4089  acyl-CoA dehydrogenase domain-containing protein  50.76 
 
 
601 aa  605  9.999999999999999e-173  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0810  acyl-CoA dehydrogenase domain protein  50.68 
 
 
598 aa  604  1.0000000000000001e-171  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0571  acyl-CoA dehydrogenase domain protein  50.51 
 
 
598 aa  597  1e-169  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0592  acyl-CoA dehydrogenase domain-containing protein  50.51 
 
 
598 aa  595  1e-169  Acidovorax sp. JS42  Bacteria  normal  normal  0.559108 
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  48.13 
 
 
596 aa  579  1e-164  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_007908  Rfer_3519  acyl-CoA dehydrogenase-like  49.15 
 
 
598 aa  580  1e-164  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0105  acyl-CoA dehydrogenase-like protein  50 
 
 
612 aa  579  1e-164  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  49.15 
 
 
596 aa  575  1.0000000000000001e-163  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_012560  Avin_45920  acyl-CoA dehydrogenase  49.75 
 
 
601 aa  565  1e-160  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  46.89 
 
 
596 aa  564  1.0000000000000001e-159  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_012560  Avin_25210  acyl-CoA dehydrogenase  49 
 
 
591 aa  562  1.0000000000000001e-159  Azotobacter vinelandii DJ  Bacteria  normal  0.885326  n/a   
 
 
-
 
NC_007912  Sde_1885  putative acyl-CoA dehydrogenase  47.31 
 
 
595 aa  562  1.0000000000000001e-159  Saccharophagus degradans 2-40  Bacteria  normal  0.137162  normal 
 
 
-
 
NC_007963  Csal_2431  acyl-CoA dehydrogenase-like protein  49.58 
 
 
603 aa  565  1.0000000000000001e-159  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_06620  putative acyl-CoA dehydrogenase  47.98 
 
 
598 aa  561  1e-158  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0607  putative acyl-CoA dehydrogenase  47.64 
 
 
598 aa  559  1e-158  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  47.31 
 
 
598 aa  561  1e-158  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_009720  Xaut_4445  acyl-CoA dehydrogenase domain-containing protein  48.98 
 
 
626 aa  560  1e-158  Xanthobacter autotrophicus Py2  Bacteria  normal  0.744679  normal  0.0140421 
 
 
-
 
NC_007778  RPB_4606  Acyl-CoA dehydrogenase-like  47.89 
 
 
596 aa  555  1e-157  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.504166  normal 
 
 
-
 
NC_002947  PP_3554  acyl-CoA dehydrogenase domain-containing protein  49.16 
 
 
589 aa  553  1e-156  Pseudomonas putida KT2440  Bacteria  normal  0.244117  normal 
 
 
-
 
NC_008740  Maqu_2750  acyl-CoA dehydrogenase domain-containing protein  46.39 
 
 
599 aa  553  1e-156  Marinobacter aquaeolei VT8  Bacteria  unclonable  0.000084613  n/a   
 
 
-
 
NC_010322  PputGB1_2368  acyl-CoA dehydrogenase domain-containing protein  49.41 
 
 
589 aa  552  1e-156  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0506  acyl-CoA dehydrogenase family protein  48.47 
 
 
592 aa  551  1e-155  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4677  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.21 
 
 
592 aa  548  1e-155  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0983724  normal 
 
 
-
 
NC_009439  Pmen_4081  acyl-CoA dehydrogenase domain-containing protein  46.39 
 
 
601 aa  550  1e-155  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_09630  putative acyl-CoA dehydrogenase  48.06 
 
 
593 aa  549  1e-155  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.806665  normal 
 
 
-
 
NC_007492  Pfl01_5166  Acyl-CoA dehydrogenase-like  46.76 
 
 
592 aa  548  1e-155  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.164353 
 
 
-
 
NC_008740  Maqu_2749  acyl-CoA dehydrogenase domain-containing protein  46.95 
 
 
596 aa  550  1e-155  Marinobacter aquaeolei VT8  Bacteria  normal  0.59666  n/a   
 
 
-
 
NC_009656  PSPA7_0606  putative acyl-CoA dehydrogenase  46.89 
 
 
601 aa  550  1e-155  Pseudomonas aeruginosa PA7  Bacteria  normal  0.941769  n/a   
 
 
-
 
NC_010322  PputGB1_0398  acyl-CoA dehydrogenase domain-containing protein  46.22 
 
 
601 aa  549  1e-155  Pseudomonas putida GB-1  Bacteria  normal  0.257074  normal 
 
 
-
 
NC_007958  RPD_0804  acyl-CoA dehydrogenase-like  46.88 
 
 
596 aa  550  1e-155  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2039  acyl-CoA dehydrogenase domain-containing protein  46.39 
 
 
598 aa  550  1e-155  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_06600  putative acyl-CoA dehydrogenase  47.06 
 
 
601 aa  551  1e-155  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0368  acyl-CoA dehydrogenase domain-containing protein  46.22 
 
 
601 aa  548  1e-154  Pseudomonas putida KT2440  Bacteria  normal  0.335716  normal 
 
 
-
 
NC_003910  CPS_1177  acyl-CoA dehydrogenase family protein  46.26 
 
 
598 aa  546  1e-154  Colwellia psychrerythraea 34H  Bacteria  normal  0.158836  n/a   
 
 
-
 
NC_009512  Pput_2220  acyl-CoA dehydrogenase domain-containing protein  48.82 
 
 
594 aa  547  1e-154  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0885  acyl-CoA dehydrogenase domain protein  47.39 
 
 
596 aa  548  1e-154  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.894915  n/a   
 
 
-
 
NC_009439  Pmen_3819  acyl-CoA dehydrogenase domain-containing protein  48.23 
 
 
590 aa  546  1e-154  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_01173  acyl-CoA dehydrogenase  47.05 
 
 
597 aa  548  1e-154  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.520854  n/a   
 
 
-
 
NC_009512  Pput_0394  acyl-CoA dehydrogenase domain-containing protein  46.22 
 
 
601 aa  548  1e-154  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2768  acyl-CoA dehydrogenase family protein  47.41 
 
 
596 aa  543  1e-153  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_4681  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  46.55 
 
 
601 aa  543  1e-153  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2777  acyl-CoA dehydrogenase domain protein  49.39 
 
 
596 aa  544  1e-153  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.932954  normal 
 
 
-
 
NC_007492  Pfl01_5170  Acyl-CoA dehydrogenase-like  46.08 
 
 
601 aa  545  1e-153  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.131109  normal  0.317042 
 
 
-
 
NC_010501  PputW619_4834  acyl-CoA dehydrogenase domain-containing protein  46.05 
 
 
601 aa  543  1e-153  Pseudomonas putida W619  Bacteria  normal  normal  0.649579 
 
 
-
 
NC_008463  PA14_68510  putative acyl-CoA dehydrogenase  47.99 
 
 
596 aa  542  1e-153  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.0032913  normal  0.251007 
 
 
-
 
NC_009439  Pmen_4079  acyl-CoA dehydrogenase domain-containing protein  47.7 
 
 
592 aa  545  1e-153  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  47.56 
 
 
592 aa  543  1e-153  Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  47.23 
 
 
592 aa  540  9.999999999999999e-153  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0500  acyl-CoA dehydrogenase family protein  46.05 
 
 
601 aa  539  9.999999999999999e-153  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.837085  n/a   
 
 
-
 
NC_009485  BBta_0815  putative acyl-CoA dehydrogenase  45.19 
 
 
596 aa  540  9.999999999999999e-153  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.809407 
 
 
-
 
NC_009439  Pmen_3101  acyl-CoA dehydrogenase domain-containing protein  46.23 
 
 
592 aa  540  9.999999999999999e-153  Pseudomonas mendocina ymp  Bacteria  normal  0.165418  normal 
 
 
-
 
NC_009656  PSPA7_5930  putative acyl-CoA dehydrogenase  47.82 
 
 
596 aa  540  9.999999999999999e-153  Pseudomonas aeruginosa PA7  Bacteria  normal  0.505334  n/a   
 
 
-
 
NC_009092  Shew_2164  acyl-CoA dehydrogenase domain-containing protein  47.56 
 
 
596 aa  538  1e-151  Shewanella loihica PV-4  Bacteria  normal  normal  0.764228 
 
 
-
 
NC_009656  PSPA7_0899  putative acyl-CoA dehydrogenase  48.06 
 
 
593 aa  537  1e-151  Pseudomonas aeruginosa PA7  Bacteria  normal  0.183433  n/a   
 
 
-
 
NC_008687  Pden_2868  acyl-CoA dehydrogenase domain-containing protein  46.57 
 
 
592 aa  538  1e-151  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.259312 
 
 
-
 
NC_010505  Mrad2831_5758  acyl-CoA dehydrogenase domain-containing protein  46.62 
 
 
595 aa  536  1e-151  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1852  acyl-CoA dehydrogenase domain-containing protein  47.04 
 
 
596 aa  533  1e-150  Shewanella pealeana ATCC 700345  Bacteria  normal  0.265206  n/a   
 
 
-
 
NC_009831  Ssed_2696  acyl-CoA dehydrogenase domain-containing protein  45.19 
 
 
596 aa  532  1e-150  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2552  acyl-CoA dehydrogenase domain-containing protein  47.04 
 
 
596 aa  533  1e-150  Shewanella sp. ANA-3  Bacteria  normal  0.0690519  normal 
 
 
-
 
NC_010322  PputGB1_0400  acyl-CoA dehydrogenase domain-containing protein  46.49 
 
 
592 aa  535  1e-150  Pseudomonas putida GB-1  Bacteria  normal  normal  0.672876 
 
 
-
 
NC_002947  PP_0370  acyl-CoA dehydrogenase domain-containing protein  47.16 
 
 
592 aa  531  1e-149  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2970  acyl-CoA dehydrogenase-like  45.76 
 
 
591 aa  529  1e-149  Jannaschia sp. CCS1  Bacteria  normal  0.108103  normal  0.100369 
 
 
-
 
NC_007925  RPC_0737  acyl-CoA dehydrogenase-like  44.78 
 
 
596 aa  529  1e-149  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.67515 
 
 
-
 
NC_010511  M446_3278  acyl-CoA dehydrogenase domain-containing protein  45.55 
 
 
597 aa  529  1e-149  Methylobacterium sp. 4-46  Bacteria  normal  0.556327  normal  0.981132 
 
 
-
 
NC_008322  Shewmr7_2459  acyl-CoA dehydrogenase domain-containing protein  46.79 
 
 
596 aa  528  1e-149  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00932419 
 
 
-
 
NC_008345  Sfri_2744  acyl-CoA dehydrogenase domain-containing protein  45.12 
 
 
596 aa  531  1e-149  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4832  acyl-CoA dehydrogenase domain-containing protein  45.88 
 
 
592 aa  530  1e-149  Pseudomonas putida W619  Bacteria  normal  normal  0.946881 
 
 
-
 
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