More than 300 homologs were found in PanDaTox collection
for query gene Sfri_2066 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007005  Psyr_0505  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  52.08 
 
 
600 aa  644    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0561  acyl-CoA dehydrogenase domain-containing protein  51.66 
 
 
622 aa  637    Pseudomonas mendocina ymp  Bacteria  normal  hitchhiker  0.00000000252916 
 
 
-
 
NC_009092  Shew_2868  acyl-CoA dehydrogenase domain-containing protein  53.73 
 
 
602 aa  655    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2066  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
601 aa  1251    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5032  acyl-CoA dehydrogenase domain protein  52.42 
 
 
601 aa  633  1e-180  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.690717 
 
 
-
 
NC_004578  PSPTO_5020  acyl-CoA dehydrogenase family protein  51.25 
 
 
600 aa  633  1e-180  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0451  Acyl-CoA dehydrogenase-like  51.08 
 
 
600 aa  632  1e-180  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.821544  normal 
 
 
-
 
NC_009656  PSPA7_5757  putative acyl-CoA dehydrogenase  51.58 
 
 
600 aa  633  1e-180  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0517  acyl-CoA dehydrogenase domain-containing protein  51.75 
 
 
600 aa  632  1e-180  Pseudomonas putida W619  Bacteria  normal  0.0563795  normal  0.38064 
 
 
-
 
NC_008463  PA14_66350  putative acyl-CoA dehydrogenase  51.41 
 
 
600 aa  631  1e-179  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4821  acyl-CoA dehydrogenase domain-containing protein  51.25 
 
 
600 aa  618  1e-176  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4948  acyl-CoA dehydrogenase domain-containing protein  50.92 
 
 
600 aa  617  1e-175  Pseudomonas putida KT2440  Bacteria  normal  0.669366  normal 
 
 
-
 
NC_010322  PputGB1_4997  acyl-CoA dehydrogenase domain-containing protein  51.08 
 
 
600 aa  616  1e-175  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2845  acyl-CoA dehydrogenase domain-containing protein  49.75 
 
 
600 aa  606  9.999999999999999e-173  Marinobacter aquaeolei VT8  Bacteria  normal  0.26253  n/a   
 
 
-
 
NC_010682  Rpic_1444  acyl-CoA dehydrogenase domain protein  50.4 
 
 
622 aa  600  1e-170  Ralstonia pickettii 12J  Bacteria  normal  normal  0.0386828 
 
 
-
 
NC_012856  Rpic12D_1485  acyl-CoA dehydrogenase domain protein  50.4 
 
 
622 aa  595  1e-169  Ralstonia pickettii 12D  Bacteria  normal  0.275641  normal  0.0574258 
 
 
-
 
NC_003295  RSc1762  acyl-CoA dehydrogenase oxidoreductase protein  49.76 
 
 
625 aa  589  1e-167  Ralstonia solanacearum GMI1000  Bacteria  normal  0.492096  normal  0.209412 
 
 
-
 
NC_013510  Tcur_1227  acyl-CoA dehydrogenase domain protein  49.34 
 
 
599 aa  588  1e-166  Thermomonospora curvata DSM 43183  Bacteria  normal  0.556988  n/a   
 
 
-
 
NC_013946  Mrub_2720  acyl-CoA dehydrogenase domain-containing protein  48.58 
 
 
592 aa  583  1.0000000000000001e-165  Meiothermus ruber DSM 1279  Bacteria  normal  0.78242  normal 
 
 
-
 
NC_008228  Patl_2141  acyl-CoA dehydrogenase-like  47.63 
 
 
616 aa  580  1e-164  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4675  acyl-CoA dehydrogenase domain protein  49.09 
 
 
597 aa  568  1e-161  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3567  acyl-CoA dehydrogenase domain protein  48.93 
 
 
591 aa  569  1e-161  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0119  acyl-CoA dehydrogenase domain-containing protein  49.35 
 
 
588 aa  567  1e-160  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0234574 
 
 
-
 
NC_009077  Mjls_0100  acyl-CoA dehydrogenase domain-containing protein  49.18 
 
 
588 aa  566  1e-160  Mycobacterium sp. JLS  Bacteria  normal  normal  0.119602 
 
 
-
 
NC_008146  Mmcs_0110  acyl-CoA dehydrogenase-like protein  49.35 
 
 
588 aa  567  1e-160  Mycobacterium sp. MCS  Bacteria  normal  0.242894  n/a   
 
 
-
 
NC_007347  Reut_A1408  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.03 
 
 
618 aa  565  1.0000000000000001e-159  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01005  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  46.59 
 
 
611 aa  559  1e-158  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1004  acyl-CoA dehydrogenase domain-containing protein  47.32 
 
 
601 aa  557  1e-157  Psychrobacter sp. PRwf-1  Bacteria  normal  hitchhiker  0.0000430658 
 
 
-
 
NC_007973  Rmet_1852  acyl-CoA dehydrogenase-like protein  48.87 
 
 
619 aa  555  1e-157  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.232086 
 
 
-
 
NC_014210  Ndas_1582  acyl-CoA dehydrogenase domain protein  47.28 
 
 
598 aa  550  1e-155  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.900007  decreased coverage  0.00956274 
 
 
-
 
NC_007969  Pcryo_0861  acyl-CoA dehydrogenase-like  47.69 
 
 
601 aa  544  1e-153  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2405  acyl-CoA dehydrogenase-like  47.58 
 
 
598 aa  545  1e-153  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1320  acyl-CoA dehydrogenase domain-containing protein  45.99 
 
 
609 aa  540  9.999999999999999e-153  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.895638 
 
 
-
 
NC_007510  Bcep18194_A4473  Acyl-CoA dehydrogenase  46.03 
 
 
609 aa  536  1e-151  Burkholderia sp. 383  Bacteria  normal  0.398734  normal 
 
 
-
 
NC_007509  Bcep18194_C7558  Acyl-CoA dehydrogenase  45.14 
 
 
607 aa  535  1e-150  Burkholderia sp. 383  Bacteria  normal  0.0382442  normal  0.166512 
 
 
-
 
NC_010551  BamMC406_1258  acyl-CoA dehydrogenase domain-containing protein  46.52 
 
 
609 aa  531  1e-149  Burkholderia ambifaria MC40-6  Bacteria  normal  0.594087  normal 
 
 
-
 
NC_008390  Bamb_1233  acyl-CoA dehydrogenase domain-containing protein  46.35 
 
 
609 aa  528  1e-149  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1341  acyl-CoA dehydrogenase domain-containing protein  46.35 
 
 
609 aa  524  1e-147  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0860  acyl-CoA dehydrogenase-like  46.35 
 
 
609 aa  524  1e-147  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2922  acyl-CoA dehydrogenase domain protein  46.94 
 
 
617 aa  520  1e-146  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1777  putative acyl-CoA dehydrogenase  45.85 
 
 
617 aa  521  1e-146  Methylibium petroleiphilum PM1  Bacteria  normal  0.130183  normal  0.0640101 
 
 
-
 
NC_009484  Acry_1573  acyl-CoA dehydrogenase domain-containing protein  43.22 
 
 
599 aa  511  1e-143  Acidiphilium cryptum JF-5  Bacteria  normal  0.77864  n/a   
 
 
-
 
NC_011992  Dtpsy_2017  acyl-CoA dehydrogenase domain protein  44.94 
 
 
619 aa  506  9.999999999999999e-143  Acidovorax ebreus TPSY  Bacteria  normal  0.875107  n/a   
 
 
-
 
NC_014158  Tpau_0702  acyl-CoA dehydrogenase domain protein  44.5 
 
 
606 aa  505  9.999999999999999e-143  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2570  acyl-CoA dehydrogenase-like  45.8 
 
 
627 aa  507  9.999999999999999e-143  Polaromonas sp. JS666  Bacteria  normal  0.215249  normal  0.667801 
 
 
-
 
NC_008782  Ajs_1687  acyl-CoA dehydrogenase domain-containing protein  44.77 
 
 
642 aa  503  1e-141  Acidovorax sp. JS42  Bacteria  normal  normal  0.291033 
 
 
-
 
NC_010002  Daci_3315  acyl-CoA dehydrogenase domain-containing protein  45.02 
 
 
645 aa  497  1e-139  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00913148 
 
 
-
 
NC_007908  Rfer_2384  acyl-CoA dehydrogenase-like  45.09 
 
 
618 aa  489  1e-137  Rhodoferax ferrireducens T118  Bacteria  normal  0.225519  n/a   
 
 
-
 
NC_008752  Aave_2877  acyl-CoA dehydrogenase domain-containing protein  42.97 
 
 
652 aa  491  1e-137  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1076  acyl-CoA dehydrogenase domain protein  41.43 
 
 
606 aa  454  1.0000000000000001e-126  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.276449 
 
 
-
 
NC_013440  Hoch_4640  acyl-CoA dehydrogenase domain protein  40.47 
 
 
599 aa  454  1.0000000000000001e-126  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1853  acyl-CoA dehydrogenase domain-containing protein  43.16 
 
 
608 aa  452  1e-125  Nocardioides sp. JS614  Bacteria  normal  0.771828  n/a   
 
 
-
 
NC_008786  Veis_1790  acyl-CoA dehydrogenase domain-containing protein  46.41 
 
 
563 aa  433  1e-120  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2164  acyl-CoA dehydrogenase domain-containing protein  39.62 
 
 
605 aa  417  9.999999999999999e-116  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000583422  n/a   
 
 
-
 
NC_009943  Dole_2366  acyl-CoA dehydrogenase domain-containing protein  38.24 
 
 
601 aa  407  1.0000000000000001e-112  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000727045  n/a   
 
 
-
 
NC_007517  Gmet_2211  Acyl-CoA dehydrogenase-like  36.38 
 
 
615 aa  385  1e-105  Geobacter metallireducens GS-15  Bacteria  normal  0.0172956  normal  0.0102784 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  36.72 
 
 
594 aa  383  1e-105  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  36.65 
 
 
596 aa  372  1e-102  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  37.19 
 
 
596 aa  374  1e-102  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_007336  Reut_C6066  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  38.15 
 
 
598 aa  369  1e-101  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  36.09 
 
 
594 aa  371  1e-101  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_003910  CPS_1177  acyl-CoA dehydrogenase family protein  36.21 
 
 
598 aa  367  1e-100  Colwellia psychrerythraea 34H  Bacteria  normal  0.158836  n/a   
 
 
-
 
NC_009943  Dole_1305  acyl-CoA dehydrogenase domain-containing protein  33.67 
 
 
604 aa  368  1e-100  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000712718  n/a   
 
 
-
 
NC_008554  Sfum_1402  acyl-CoA dehydrogenase domain-containing protein  35.77 
 
 
619 aa  367  1e-100  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.55208 
 
 
-
 
NC_008740  Maqu_2750  acyl-CoA dehydrogenase domain-containing protein  36.92 
 
 
599 aa  359  8e-98  Marinobacter aquaeolei VT8  Bacteria  unclonable  0.000084613  n/a   
 
 
-
 
NC_008345  Sfri_2039  acyl-CoA dehydrogenase domain-containing protein  37.24 
 
 
598 aa  357  2.9999999999999997e-97  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2749  acyl-CoA dehydrogenase domain-containing protein  35.84 
 
 
596 aa  357  3.9999999999999996e-97  Marinobacter aquaeolei VT8  Bacteria  normal  0.59666  n/a   
 
 
-
 
NC_010717  PXO_01173  acyl-CoA dehydrogenase  35.57 
 
 
597 aa  356  5e-97  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.520854  n/a   
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  37.19 
 
 
595 aa  355  1e-96  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_013440  Hoch_5060  acyl-CoA dehydrogenase domain protein  35.96 
 
 
609 aa  355  1e-96  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  36.96 
 
 
595 aa  353  5e-96  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_007969  Pcryo_1452  acyl-CoA dehydrogenase-like  35.13 
 
 
597 aa  352  1e-95  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  36.35 
 
 
595 aa  350  3e-95  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  36.35 
 
 
595 aa  350  3e-95  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  36.35 
 
 
595 aa  350  3e-95  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  36.36 
 
 
596 aa  350  4e-95  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_009439  Pmen_3819  acyl-CoA dehydrogenase domain-containing protein  34.93 
 
 
590 aa  350  5e-95  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  37.23 
 
 
595 aa  349  7e-95  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  37.23 
 
 
595 aa  349  7e-95  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  37.23 
 
 
595 aa  349  7e-95  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  37.23 
 
 
595 aa  349  7e-95  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2431  acyl-CoA dehydrogenase-like protein  36.9 
 
 
603 aa  349  7e-95  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0599  acyl-CoA dehydrogenase  35.43 
 
 
597 aa  349  9e-95  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0446  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  36.18 
 
 
595 aa  348  2e-94  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  34.49 
 
 
598 aa  348  2e-94  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_009524  PsycPRwf_0912  acyl-CoA dehydrogenase domain-containing protein  35.8 
 
 
597 aa  348  2e-94  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4445  acyl-CoA dehydrogenase domain-containing protein  36.72 
 
 
626 aa  347  3e-94  Xanthobacter autotrophicus Py2  Bacteria  normal  0.744679  normal  0.0140421 
 
 
-
 
NC_012791  Vapar_0810  acyl-CoA dehydrogenase domain protein  36.92 
 
 
598 aa  347  3e-94  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  36.89 
 
 
595 aa  347  4e-94  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  36.89 
 
 
595 aa  347  4e-94  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  36.89 
 
 
595 aa  347  4e-94  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  35.68 
 
 
599 aa  347  5e-94  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  37.28 
 
 
595 aa  347  5e-94  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_009831  Ssed_2696  acyl-CoA dehydrogenase domain-containing protein  36.61 
 
 
596 aa  346  6e-94  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0213  acyl-CoA dehydrogenase domain protein  35.7 
 
 
598 aa  346  8e-94  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2744  acyl-CoA dehydrogenase domain-containing protein  37.4 
 
 
596 aa  346  8e-94  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4089  acyl-CoA dehydrogenase domain-containing protein  36.08 
 
 
601 aa  345  1e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_4032  acyl-CoA dehydrogenase domain-containing protein  37.94 
 
 
596 aa  345  1e-93  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000200788 
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  36.52 
 
 
598 aa  345  1e-93  Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  36.56 
 
 
595 aa  344  2e-93  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
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