Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0451 |
Symbol | |
ID | 3712846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 512653 |
End bp | 514455 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | Acyl-CoA dehydrogenase-like |
Protein accession | YP_346184 |
Protein GI | 77456679 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.821544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGA CGCTGCTCAG TTCCCGCAAT CTGGCTTTCG AGCTGTACGA AGTCCTCGAT GCCGAGGGCC TGACCCGGCG CGAGCGGTTT GCCGAGCACA ACCGCGAAAC CTTCGATGCC GCCATCGGCA CGGCGCGCAA CATCGCCGAG AAGTACTTCG CACCGCACAA CCGCAAGGGC GACGAGAACG AGCCGCGCTA CGAGAACGGT CAGGCAATTC TGATTCCCGA GGTGAAACCG GCGGTGGATG CGTTCCTCGA AGCCGGATTC CTCAACGCGG CGCGCAGTTT CGACGCCGGC GGCATGCAAC TTCCCACACT GTTGTCCCAG GCCTGCTTCG CCCACTTCCA GTCAGCCAAC GCGGCGTCGA CCTCCTATCC GTTCCTGACC ATGGGTGCGG CCAACCTGAT CGAAAGTTTC GGCACCGAAG AGCAGAAGCA ACGCTTCCTT CAACCGATGA TCGACGGCCG TTTCTTCGGC ACCATGGCCC TGACCGAGCC CCATGCCGGT TCGTCGCTGT CGGATATTCG TACCCGAGCC GAGCCTGCGT CCGACGGCAC TTATCGCCTC AAGGGCAACA AGATCTTCAT CTCCGGCGGT GACCACCCGC TCTCGGAAAA CATCGTGCAC ATGGTGCTGG CCAAGCTGCC GGACGCGCCG GCCGGGGTGA AAGGTATTTC ACTGTTCATC GTGCCGAAGT TTCTGGTCAA CGATGACGGC AGCCTGGGCA AGCGCAACGA CGTGCTGCTG GCCGGGCTGT TCCACAAGAT GGGCTGGCGC GGAACGACGT CCACGGCGCT GAACTTCGGC GATAACGGTG AGTGCGTCGG TTATCTGGTG GGCAAGCCGC ATCACGGCTT GAGCTACATG TTCCAGATGA TGAACGAAGC TCGGATCGGT GTCGGCATGG GCGCGGTGAT GCTCGGTTAC GCCGGTTACC TGTACTCGCT GGAATACGCC CGCGAACGGC CGCAGGGTCG GGTGCCGGAC AGCAAGGACC CGACGACGGC GCCGGTGGCG ATCATTCAGC ACGCGGACGT CAGACGCATG CTGCTGACAC AGAAATCCTA CGTTGAAGGG GCGTTCGATC TCGGTCTGTA TGCGGCGCGC CTGTTCGATG ACACCACCAC GCTGGAGATC GAAGCCGAGC GCAAACAGGC TCACGAGCTA TTGGATTTGC TGACGCCGAT CGTCAAATCC TGGCCGTCCG AGTTCTGCCT GAAGGCCAAC GAACTGGCGA TCCAGATTCT CGGCGGCCAC GGTTACACCC GCGAATACCC GGTGGAGCAG TACTACCGCG ACAATCGCCT GAACCCGATC CACGAAGGCA CTCACGGCAT TCAGTCGCTG GACTTGCTGG GACGCAAACT GGCGCAGAAC GGTGGTGCCG GGCTCAAGCA ACTGATTCGC CTGATCGCCA ACACCGCCGA GCGCGCAGTC CCGTACGAAT CCTTGACCGC ACTGCGTGAG CCGTTGGAGA AACTGGTGGC GCGCTTGCAG AGCGTGACCA TTGGTCTGCT GACCGACCTG GCTCAGGGCA AGGTCAACAG CAGCCTGGCG AACTCGGCGT TGTACCTGAA GGTGTTCGGG CATGCGGTGA TTGGCTGGCG CTGGCTGGAG CAGGCGATTC GGGCGGAGGA AGGGTTGGCC AAAGGCAATG CGGCGGATGC CGACTTCTAT AAGGGCAAGT TGCAGGCGGC GCGGTATTTC CTGACGTGGG AAGTGCCGGG CTGCCAGCAT GAGCTGACGT TGCTGGAGGC GCGGGATGAT ACGTGTCTGG CAATGCAGGA TGCGTGGTTC TGA
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Protein sequence | MSETLLSSRN LAFELYEVLD AEGLTRRERF AEHNRETFDA AIGTARNIAE KYFAPHNRKG DENEPRYENG QAILIPEVKP AVDAFLEAGF LNAARSFDAG GMQLPTLLSQ ACFAHFQSAN AASTSYPFLT MGAANLIESF GTEEQKQRFL QPMIDGRFFG TMALTEPHAG SSLSDIRTRA EPASDGTYRL KGNKIFISGG DHPLSENIVH MVLAKLPDAP AGVKGISLFI VPKFLVNDDG SLGKRNDVLL AGLFHKMGWR GTTSTALNFG DNGECVGYLV GKPHHGLSYM FQMMNEARIG VGMGAVMLGY AGYLYSLEYA RERPQGRVPD SKDPTTAPVA IIQHADVRRM LLTQKSYVEG AFDLGLYAAR LFDDTTTLEI EAERKQAHEL LDLLTPIVKS WPSEFCLKAN ELAIQILGGH GYTREYPVEQ YYRDNRLNPI HEGTHGIQSL DLLGRKLAQN GGAGLKQLIR LIANTAERAV PYESLTALRE PLEKLVARLQ SVTIGLLTDL AQGKVNSSLA NSALYLKVFG HAVIGWRWLE QAIRAEEGLA KGNAADADFY KGKLQAARYF LTWEVPGCQH ELTLLEARDD TCLAMQDAWF
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