| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1852 |
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| Symbol | |
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| ID | 4038654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2005367 |
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| End bp | 2007226 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637977232 |
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| Product | acyl-CoA dehydrogenase-like protein |
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| Protein accession | YP_584000 |
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| Protein GI | 94310790 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.232086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGA TTCTTTCCCG TCGTGACCTC AACTTCGTTC TGTACGAATG GCTGAAGGCC
GAGGAACTGA CACAGATTCC CCGATTTTCC GATCACTCGC GCGAGACGTT CGACGCCGCG
CTGGATACGT GCGAGAAAAT CGCCACTGAT CTGTTCGCCC CGCACAACAA GAAAAGCGAT
GCCCAGGAGC CGCATTTCGA TGGCGAGACG GTCACGATCA TCCCCGAAGT CAAGACCGCG
CTGAAGGCCT TCTGCGATGC GGGCCTGATG GCCGCCGGCC AGGACTATGA GTACGGTGGC
ATGCAGTTGC CCGTCACGCT GGAGAAGGCC GCGTTCGCCT ACTTCAAGGC CGCCAACGTT
GGCACGAGTT CGTACCCGTT CCTGACGATC GGTAACTCGA ACCTGCTGCT CACGCACGGC
ACCCCGGCAC AGATCGATAC GTTCGTGCGT CCCGAACTGG AAGGTCGCTT CTTTGGCACG
ATGTGCCTGT CGGAACCGCA GGCGGGTTCG TCGCTATCGG ACATCACCAC CCGCGCCGAC
TACGAAGGCG AGTCGCCGTT GGGCCAGCAG TATCGGCTGC GCGGCAACAA GATGTGGATC
TCGGCGGGCG AGCACGAGCT CTCGGACAAT ATCGTCCACC TCGTGCTGGC CAAGATCCCG
GGCCCGGATG GCAAGCTGAT CCCGGGTGTG AAGGGTATCT CGCTGTTCAT CGTGCCGAAG
TACCTCGTCA ACGAGGATGG CTCGCTGGGC GAGCATAACG ACGTCGTGCT GGCGGGCCTG
AACCACAAGA TGGGCTATCG AGGCACCACC AACTGCCTGC TGAACTTCGG CGAAGGCATG
AAGTACCGCC CGAATGGCAA GGCGGGTGCG ATCGGTTATC TGGTCGGCGA GCCGCACAAG
GGCTTGGCCT GCATGTTCCA CATGATGAAC GAGGCGCGCA TTGGCGTTGG CCTCGGCGCC
GTGGCACTTG GCTATACCGG TTACCTCCAC GCGCTGGACT ACGCGCGCAA TCGTCCGCAG
GGCCGCCCGG TGGGGCCGCA GGGCAAGGAT CCGGCGAGCC CGCAGGTCAA GCTGGTCGAA
CATGCCGACG TCCGTCGGAT GCTGCTGGCG CAAAAGAGCT ACGTCGAAGG CGGTCTGGCG
TTGAACCTGT ACTGCGCGCG GCTGGTCGAC GACGAGCACG CGGCCAAGGC GGCCGGCGAG
GCCGAGCGGC AATGCGAACT GTCGCTGCTG TTGGATATCC TCACGCCGAT CGCCAAGAGC
TGGCCGTCGC AGTGGTGCCT GGAAGCCAAT AGCCTGGCCA TCCAGGTGCA TGGTGGCTAC
GGCTACACGC GCGAGTACAA CGTCGAGCAG TTCTATCGCG ACAACCGCCT CAATCCGATC
CACGAAGGCA CGCACGGTAT TCAGGGGCTG GACCTGCTGG GCCGCAAGGT GGTGATGCAG
GACGGCGCCG CATTCCAGTT GCTCGGCAAG CGCGTGCAGG ACACTTGCCA GCGGGCGCAG
GCCACGGGTG ACAAGACGCT GGGCGAGCAG GCCCGCGCGC TTGGCGCTGC GACCGCGCGC
CTGGCCGAGG TCACGCGCAC GCTGTGGGCG GCCGGAGATT CGAATGTCAC GCTGGCCAAC
GCGTCGGTAT ATCTGGAGGC ATTCGGCCAT GTCGTCATGG CGTGGATCTG GCTTGAGCAG
GTGCTGGTAG CGCAGGCCGC GCTGTCGAAC GCCAAGGGCG AGGATGCCGA TTTCTATCGC
GGCAAGCTGG CTGCGGCGGC GTTCTTCTTC AACTTCGAGT TGCCGAAGGT GTACCCGCAA
CTCGAGCTGC TTGCATCGCT CGATCGTACG ACGCTTGACA TGCAGGACGC CTGGTTCTGA
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| Protein sequence | MSLILSRRDL NFVLYEWLKA EELTQIPRFS DHSRETFDAA LDTCEKIATD LFAPHNKKSD
AQEPHFDGET VTIIPEVKTA LKAFCDAGLM AAGQDYEYGG MQLPVTLEKA AFAYFKAANV
GTSSYPFLTI GNSNLLLTHG TPAQIDTFVR PELEGRFFGT MCLSEPQAGS SLSDITTRAD
YEGESPLGQQ YRLRGNKMWI SAGEHELSDN IVHLVLAKIP GPDGKLIPGV KGISLFIVPK
YLVNEDGSLG EHNDVVLAGL NHKMGYRGTT NCLLNFGEGM KYRPNGKAGA IGYLVGEPHK
GLACMFHMMN EARIGVGLGA VALGYTGYLH ALDYARNRPQ GRPVGPQGKD PASPQVKLVE
HADVRRMLLA QKSYVEGGLA LNLYCARLVD DEHAAKAAGE AERQCELSLL LDILTPIAKS
WPSQWCLEAN SLAIQVHGGY GYTREYNVEQ FYRDNRLNPI HEGTHGIQGL DLLGRKVVMQ
DGAAFQLLGK RVQDTCQRAQ ATGDKTLGEQ ARALGAATAR LAEVTRTLWA AGDSNVTLAN
ASVYLEAFGH VVMAWIWLEQ VLVAQAALSN AKGEDADFYR GKLAAAAFFF NFELPKVYPQ
LELLASLDRT TLDMQDAWF
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